RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 ELOVL2Q9NXB9 296 aa13.66□□□□□ -0.22
PRPF39-202ENST00000424478 MTF2Q9Y483 593 aaPredicted RBP13.66□□□□□ -0.22
PRPF39-202ENST00000424478 FRYLO94915 3013 aa13.66□□□□□ -0.22
PRPF39-202ENST00000424478 ANKRD36A6QL64 1941 aa13.66□□□□□ -0.22
PRPF39-202ENST00000424478 TP73O15350 636 aa13.66□□□□□ -0.22
PRPF39-202ENST00000424478 AVILO75366 819 aa13.66□□□□□ -0.22
PRPF39-202ENST00000424478 ZNF821O75541 412 aaPredicted RBP13.66□□□□□ -0.22
PRPF39-202ENST00000424478 CD86P42081 329 aa13.66□□□□□ -0.22
PRPF39-202ENST00000424478 DLG2Q15700 870 aa13.66□□□□□ -0.22
PRPF39-202ENST00000424478 SMAD1Q15797 465 aaKnown RBP13.66□□□□□ -0.22
PRPF39-202ENST00000424478 LRRC73Q5JTD7 316 aa13.66□□□□□ -0.22
PRPF39-202ENST00000424478 TMCO4Q5TGY1 634 aa13.66□□□□□ -0.22
PRPF39-202ENST00000424478 MAATS1Q7Z4T9 603 aa13.66□□□□□ -0.22
PRPF39-202ENST00000424478 MRGPRX3Q96LB0 322 aa13.66□□□□□ -0.22
PRPF39-202ENST00000424478 TEKT5Q96M29 485 aa13.66□□□□□ -0.22
PRPF39-202ENST00000424478 ERVW-1Q9UQF0 538 aa13.66□□□□□ -0.22
PRPF39-202ENST00000424478 COL4A2P08572 1712 aa13.66□□□□□ -0.22
PRPF39-202ENST00000424478 TMEM63AO94886 807 aa13.65□□□□□ -0.22
PRPF39-202ENST00000424478 SERPINH1P50454 418 aaKnown RBP13.65□□□□□ -0.22
PRPF39-202ENST00000424478 PLTPP55058 493 aa13.65□□□□□ -0.22
PRPF39-202ENST00000424478 RHOAP61586 193 aa13.65□□□□□ -0.22
PRPF39-202ENST00000424478 VSNL1P62760 191 aa13.65□□□□□ -0.22
PRPF39-202ENST00000424478 PTK6Q13882 451 aa13.65□□□□□ -0.22
PRPF39-202ENST00000424478 DHX34Q14147 1143 aaKnown RBP13.65□□□□□ -0.22
PRPF39-202ENST00000424478 IZUMO3Q5VZ72 239 aa13.65□□□□□ -0.22
PRPF39-202ENST00000424478 CHST14Q8NCH0 376 aa13.65□□□□□ -0.22
PRPF39-202ENST00000424478 PDCD6IPQ8WUM4 868 aaKnown RBP13.65□□□□□ -0.22
PRPF39-202ENST00000424478 IL12RB2Q99665 862 aa13.65□□□□□ -0.22
PRPF39-202ENST00000424478 MLPHQ9BV36 600 aaPredicted RBP13.65□□□□□ -0.22
PRPF39-202ENST00000424478 NOD2Q9HC29 1040 aa13.65□□□□□ -0.22
PRPF39-202ENST00000424478 PCDH9Q9HC56 1237 aa13.65□□□□□ -0.22
PRPF39-202ENST00000424478 EVLQ9UI08 416 aaPredicted RBP13.65□□□□□ -0.22
PRPF39-202ENST00000424478 FAM50BQ9Y247 325 aa13.65□□□□□ -0.22
PRPF39-202ENST00000424478 PCDHGC4Q9Y5F7 938 aa13.65□□□□□ -0.22
PRPF39-202ENST00000424478 STIP1P31948 543 aaKnown RBP13.65□□□□□ -0.22
PRPF39-202ENST00000424478 CHRNA4P43681 627 aa13.65□□□□□ -0.22
PRPF39-202ENST00000424478 ITGA8P53708 1063 aa13.65□□□□□ -0.22
PRPF39-202ENST00000424478 SLC44A4Q53GD3 710 aa13.65□□□□□ -0.22
PRPF39-202ENST00000424478 TIGD7Q6NT04 549 aaPredicted RBP13.65□□□□□ -0.22
PRPF39-202ENST00000424478 GRIN3AQ8TCU5 1115 aa13.65□□□□□ -0.22
PRPF39-202ENST00000424478 GRK7Q8WTQ7 553 aa13.65□□□□□ -0.22
PRPF39-202ENST00000424478 MAML1Q92585 1016 aa13.65□□□□□ -0.22
PRPF39-202ENST00000424478 ASB2Q96Q27 587 aa13.65□□□□□ -0.22
PRPF39-202ENST00000424478 DONSONQ9NYP3 566 aa13.65□□□□□ -0.22
PRPF39-202ENST00000424478 LHX3Q9UBR4 397 aa13.65□□□□□ -0.22
PRPF39-202ENST00000424478 NFU1Q9UMS0 254 aa13.65□□□□□ -0.22
PRPF39-202ENST00000424478 UTP11Q9Y3A2 253 aaKnown RBP13.65□□□□□ -0.22
PRPF39-202ENST00000424478 ZDBF2Q9HCK1 2354 aa13.65□□□□□ -0.22
PRPF39-202ENST00000424478 C5orf60A6NFR6 353 aa13.65□□□□□ -0.23
PRPF39-202ENST00000424478 GOLGA8CPA6NN73 597 aa13.65□□□□□ -0.23
PRPF39-202ENST00000424478 K7EQS6 105 aa13.65□□□□□ -0.23
PRPF39-202ENST00000424478 PIGNO95427 931 aa13.65□□□□□ -0.23
PRPF39-202ENST00000424478 METAP1P53582 386 aa13.65□□□□□ -0.23
PRPF39-202ENST00000424478 IFI35P80217 286 aaPredicted RBP13.65□□□□□ -0.23
PRPF39-202ENST00000424478 HNRNPDQ14103 355 aaKnown RBP13.65□□□□□ -0.23
PRPF39-202ENST00000424478 HLTFQ14527 1009 aaKnown RBP eCLIP13.65□□□□□ -0.23
PRPF39-202ENST00000424478 FNDC3BQ53EP0 1204 aaKnown RBP13.65□□□□□ -0.23
PRPF39-202ENST00000424478 DUPD1Q68J44 220 aa13.65□□□□□ -0.23
PRPF39-202ENST00000424478 FSTL4Q6MZW2 842 aa13.65□□□□□ -0.23
PRPF39-202ENST00000424478 PKN3Q6P5Z2 889 aa13.65□□□□□ -0.23
PRPF39-202ENST00000424478 IPMKQ8NFU5 416 aa13.65□□□□□ -0.23
PRPF39-202ENST00000424478 NSMCE1Q8WV22 266 aa13.65□□□□□ -0.23
PRPF39-202ENST00000424478 CPT1BQ92523 772 aa13.65□□□□□ -0.23
PRPF39-202ENST00000424478 TRIM56Q9BRZ2 755 aaKnown RBP13.65□□□□□ -0.23
PRPF39-202ENST00000424478 FOXQ1Q9C009 403 aa13.65□□□□□ -0.23
PRPF39-202ENST00000424478 GRHL1Q9NZI5 618 aa13.65□□□□□ -0.23
PRPF39-202ENST00000424478 LAMA1P25391 3075 aa13.64□□□□□ -0.23
PRPF39-202ENST00000424478 CCDC78A2IDD5 438 aa13.64□□□□□ -0.23
PRPF39-202ENST00000424478 KRBA1A5PL33 1030 aa13.64□□□□□ -0.23
PRPF39-202ENST00000424478 GCATO75600 419 aa13.64□□□□□ -0.23
PRPF39-202ENST00000424478 PRKCGP05129 697 aa13.64□□□□□ -0.23
PRPF39-202ENST00000424478 SRFP11831 508 aa13.64□□□□□ -0.23
PRPF39-202ENST00000424478 ACTN2P35609 894 aa13.64□□□□□ -0.23
PRPF39-202ENST00000424478 IL12RB1P42701 662 aa13.64□□□□□ -0.23
PRPF39-202ENST00000424478 RENBPP51606 427 aa13.64□□□□□ -0.23
PRPF39-202ENST00000424478 ZNF234Q14588 700 aa13.64□□□□□ -0.23
PRPF39-202ENST00000424478 UBAP2Q5T6F2 1119 aaKnown RBP13.64□□□□□ -0.23
PRPF39-202ENST00000424478 RETSATQ6NUM9 610 aa13.64□□□□□ -0.23
PRPF39-202ENST00000424478 Q6ZS52 159 aa13.64□□□□□ -0.23
PRPF39-202ENST00000424478 SH2D3CQ8N5H7 860 aa13.64□□□□□ -0.23
PRPF39-202ENST00000424478 FLCNQ8NFG4 579 aa13.64□□□□□ -0.23
PRPF39-202ENST00000424478 FBXO25Q8TCJ0 367 aa13.64□□□□□ -0.23
PRPF39-202ENST00000424478 FRMD8P1Q9BZ68 369 aaPredicted RBP13.64□□□□□ -0.23
PRPF39-202ENST00000424478 GLOD4Q9HC38 313 aa13.64□□□□□ -0.23
PRPF39-202ENST00000424478 MMP2P08253 660 aa13.64□□□□□ -0.23
PRPF39-202ENST00000424478 PIRTP0C851 137 aa13.64□□□□□ -0.23
PRPF39-202ENST00000424478 PRKCHP24723 683 aa13.64□□□□□ -0.23
PRPF39-202ENST00000424478 CRADDP78560 199 aa13.64□□□□□ -0.23
PRPF39-202ENST00000424478 KIAA0907Q7Z7F0 614 aaPredicted RBP13.64□□□□□ -0.23
PRPF39-202ENST00000424478 PRPF39Q86UA1 669 aaKnown RBP13.64□□□□□ -0.23
PRPF39-202ENST00000424478 RTP4Q96DX8 246 aa13.64□□□□□ -0.23
PRPF39-202ENST00000424478 PARD6BQ9BYG5 372 aa13.64□□□□□ -0.23
PRPF39-202ENST00000424478 SLC6A17Q9H1V8 727 aa13.64□□□□□ -0.23
PRPF39-202ENST00000424478 PRDM16Q9HAZ2 1276 aa13.64□□□□□ -0.23
PRPF39-202ENST00000424478 SLC25A13Q9UJS0 675 aa13.64□□□□□ -0.23
PRPF39-202ENST00000424478 SLC27A6Q9Y2P4 619 aa13.64□□□□□ -0.23
PRPF39-202ENST00000424478 AGTP01019 485 aa13.63□□□□□ -0.23
PRPF39-202ENST00000424478 DLDP09622 509 aaKnown RBP13.63□□□□□ -0.23
PRPF39-202ENST00000424478 FAM153BP0C7A2 387 aa13.63□□□□□ -0.23
PRPF39-202ENST00000424478 PLK1P53350 603 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms