RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 SERGEFQ9UGK8 458 aa18.77■□□□□ 0.6
HDAC6-205ENST00000423941 FZD4Q9ULV1 537 aa18.77■□□□□ 0.6
HDAC6-205ENST00000423941 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.77■□□□□ 0.6
HDAC6-205ENST00000423941 CAPN6Q9Y6Q1 641 aa18.77■□□□□ 0.6
HDAC6-205ENST00000423941 WDR87Q6ZQQ6 2873 aa18.77■□□□□ 0.6
HDAC6-205ENST00000423941 USP34Q70CQ2 3546 aa18.77■□□□□ 0.59
HDAC6-205ENST00000423941 DMDP11532 3685 aa18.76■□□□□ 0.59
HDAC6-205ENST00000423941 OTOGLQ3ZCN5 2332 aa18.76■□□□□ 0.59
HDAC6-205ENST00000423941 NRDCO43847 1150 aa18.76■□□□□ 0.59
HDAC6-205ENST00000423941 RHOBTB1O94844 696 aa18.76■□□□□ 0.59
HDAC6-205ENST00000423941 POP4O95707 220 aaKnown RBP18.76■□□□□ 0.59
HDAC6-205ENST00000423941 IL1BP01584 269 aa18.76■□□□□ 0.59
HDAC6-205ENST00000423941 PRNPP04156 253 aa18.76■□□□□ 0.59
HDAC6-205ENST00000423941 GARSP41250 739 aaKnown RBP18.76■□□□□ 0.59
HDAC6-205ENST00000423941 METAP1P53582 386 aa18.76■□□□□ 0.59
HDAC6-205ENST00000423941 NAP1L1P55209 391 aaKnown RBP18.76■□□□□ 0.59
HDAC6-205ENST00000423941 COPS2P61201 443 aa18.76■□□□□ 0.59
HDAC6-205ENST00000423941 SNRPD1P62314 119 aaKnown RBP18.76■□□□□ 0.59
HDAC6-205ENST00000423941 GBE1Q04446 702 aa18.76■□□□□ 0.59
HDAC6-205ENST00000423941 NSUN2Q08J23 767 aaKnown RBP eCLIP18.76■□□□□ 0.59
HDAC6-205ENST00000423941 PPP2R5EQ16537 467 aa18.76■□□□□ 0.59
HDAC6-205ENST00000423941 MYLK3Q32MK0 819 aa18.76■□□□□ 0.59
HDAC6-205ENST00000423941 TTC31Q49AM3 519 aaPredicted RBP18.76■□□□□ 0.59
HDAC6-205ENST00000423941 ZFYVE27Q5T4F4 411 aa18.76■□□□□ 0.59
HDAC6-205ENST00000423941 TMCO4Q5TGY1 634 aa18.76■□□□□ 0.59
HDAC6-205ENST00000423941 FAM46CQ5VWP2 391 aa18.76■□□□□ 0.59
HDAC6-205ENST00000423941 ZNF354CQ86Y25 554 aa18.76■□□□□ 0.59
HDAC6-205ENST00000423941 TEX26Q8N6G2 289 aa18.76■□□□□ 0.59
HDAC6-205ENST00000423941 CADM4Q8NFZ8 388 aa18.76■□□□□ 0.59
HDAC6-205ENST00000423941 ALG3Q92685 438 aa18.76■□□□□ 0.59
HDAC6-205ENST00000423941 ANP32BQ92688 251 aaKnown RBP18.76■□□□□ 0.59
HDAC6-205ENST00000423941 TOE1Q96GM8 510 aaKnown RBP18.76■□□□□ 0.59
HDAC6-205ENST00000423941 PSKH2Q96QS6 385 aa18.76■□□□□ 0.59
HDAC6-205ENST00000423941 PCED1AQ9H1Q7 454 aa18.76■□□□□ 0.59
HDAC6-205ENST00000423941 NEUROG2Q9H2A3 272 aa18.76■□□□□ 0.59
HDAC6-205ENST00000423941 KCNF1Q9H3M0 494 aa18.76■□□□□ 0.59
HDAC6-205ENST00000423941 FBXL12Q9NXK8 326 aa18.76■□□□□ 0.59
HDAC6-205ENST00000423941 HECAQ9UBI9 543 aaPredicted RBP18.76■□□□□ 0.59
HDAC6-205ENST00000423941 IL36AQ9UHA7 158 aa18.76■□□□□ 0.59
HDAC6-205ENST00000423941 EFR3BQ9Y2G0 817 aa18.76■□□□□ 0.59
HDAC6-205ENST00000423941 TNNT1P13805 278 aa18.75■□□□□ 0.59
HDAC6-205ENST00000423941 ZFXP17010 805 aaPredicted RBP18.75■□□□□ 0.59
HDAC6-205ENST00000423941 CCNCP24863 283 aa18.75■□□□□ 0.59
HDAC6-205ENST00000423941 ACSL1P33121 698 aa18.75■□□□□ 0.59
HDAC6-205ENST00000423941 PTPN7P35236 360 aa18.75■□□□□ 0.59
HDAC6-205ENST00000423941 RECQLP46063 649 aaPredicted RBP18.75■□□□□ 0.59
HDAC6-205ENST00000423941 SLC10A7Q0GE19 358 aa18.75■□□□□ 0.59
HDAC6-205ENST00000423941 SFSWAPQ12872 951 aaKnown RBP18.75■□□□□ 0.59
HDAC6-205ENST00000423941 ELF2Q15723 593 aa18.75■□□□□ 0.59
HDAC6-205ENST00000423941 TFDP3Q5H9I0 405 aa18.75■□□□□ 0.59
HDAC6-205ENST00000423941 PRR23BQ6ZRT6 265 aa18.75■□□□□ 0.59
HDAC6-205ENST00000423941 LPCAT2Q7L5N7 544 aa18.75■□□□□ 0.59
HDAC6-205ENST00000423941 MAML1Q92585 1016 aa18.75■□□□□ 0.59
HDAC6-205ENST00000423941 HDAC11Q96DB2 347 aa18.75■□□□□ 0.59
HDAC6-205ENST00000423941 FAM122AQ96E09 287 aa18.75■□□□□ 0.59
HDAC6-205ENST00000423941 HES6Q96HZ4 224 aa18.75■□□□□ 0.59
HDAC6-205ENST00000423941 RBM41Q96IZ5 413 aaKnown RBP18.75■□□□□ 0.59
HDAC6-205ENST00000423941 CPEB1Q9BZB8 566 aaKnown RBP18.75■□□□□ 0.59
HDAC6-205ENST00000423941 TM6SF2Q9BZW4 377 aa18.75■□□□□ 0.59
HDAC6-205ENST00000423941 SP110Q9HB58 689 aa18.75■□□□□ 0.59
HDAC6-205ENST00000423941 SGK2Q9HBY8 427 aa18.75■□□□□ 0.59
HDAC6-205ENST00000423941 AMFRQ9UKV5 643 aa18.75■□□□□ 0.59
HDAC6-205ENST00000423941 PPP2R2CQ9Y2T4 447 aa18.75■□□□□ 0.59
HDAC6-205ENST00000423941 hCG_1818297A0A087WSY0 165 aa18.74■□□□□ 0.59
HDAC6-205ENST00000423941 A0A1W2PP55 124 aa18.74■□□□□ 0.59
HDAC6-205ENST00000423941 MIF4GDA9UHW6 222 aaKnown RBP18.74■□□□□ 0.59
HDAC6-205ENST00000423941 C1QTNF3-AMACRE9PGA6 284 aa18.74■□□□□ 0.59
HDAC6-205ENST00000423941 APOL1O14791 398 aa18.74■□□□□ 0.59
HDAC6-205ENST00000423941 DDX3YO15523 660 aaKnown RBP18.74■□□□□ 0.59
HDAC6-205ENST00000423941 SLC7A4O43246 635 aa18.74■□□□□ 0.59
HDAC6-205ENST00000423941 BNIP3LO60238 219 aa18.74■□□□□ 0.59
HDAC6-205ENST00000423941 LEFTY1O75610 366 aa18.74■□□□□ 0.59
HDAC6-205ENST00000423941 RETP07949 1114 aa18.74■□□□□ 0.59
HDAC6-205ENST00000423941 PSMD8P48556 350 aa18.74■□□□□ 0.59
HDAC6-205ENST00000423941 ZNF33AQ06730 810 aa18.74■□□□□ 0.59
HDAC6-205ENST00000423941 ADCY2Q08462 1091 aa18.74■□□□□ 0.59
HDAC6-205ENST00000423941 HNRNPDQ14103 355 aaKnown RBP18.74■□□□□ 0.59
HDAC6-205ENST00000423941 LBRQ14739 615 aaKnown RBP18.74■□□□□ 0.59
HDAC6-205ENST00000423941 ARSIQ5FYB1 569 aa18.74■□□□□ 0.59
HDAC6-205ENST00000423941 PEX26Q7Z412 305 aa18.74■□□□□ 0.59
HDAC6-205ENST00000423941 CACUL1Q86Y37 369 aa18.74■□□□□ 0.59
HDAC6-205ENST00000423941 SLC41A1Q8IVJ1 513 aa18.74■□□□□ 0.59
HDAC6-205ENST00000423941 TSEN2Q8NCE0 465 aaKnown RBP18.74■□□□□ 0.59
HDAC6-205ENST00000423941 GDAP1L1Q96MZ0 367 aa18.74■□□□□ 0.59
HDAC6-205ENST00000423941 OLFM3Q96PB7 478 aa18.74■□□□□ 0.59
HDAC6-205ENST00000423941 MAK16Q9BXY0 300 aaKnown RBP18.74■□□□□ 0.59
HDAC6-205ENST00000423941 HDAC8Q9BY41 377 aa18.74■□□□□ 0.59
HDAC6-205ENST00000423941 KDM4CQ9H3R0 1056 aa18.74■□□□□ 0.59
HDAC6-205ENST00000423941 RAB23Q9ULC3 237 aa18.74■□□□□ 0.59
HDAC6-205ENST00000423941 GUCA1BQ9UMX6 200 aa18.74■□□□□ 0.59
HDAC6-205ENST00000423941 NCKAP1Q9Y2A7 1128 aa18.74■□□□□ 0.59
HDAC6-205ENST00000423941 PCDHGA5Q9Y5G8 931 aa18.74■□□□□ 0.59
HDAC6-205ENST00000423941 GPR179Q6PRD1 2367 aa18.74■□□□□ 0.59
HDAC6-205ENST00000423941 RALGAPA1Q6GYQ0 2036 aa18.73■□□□□ 0.59
HDAC6-205ENST00000423941 ANKRD36A6QL64 1941 aa18.73■□□□□ 0.59
HDAC6-205ENST00000423941 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.73■□□□□ 0.59
HDAC6-205ENST00000423941 METTL12A8MUP2 240 aa18.73■□□□□ 0.59
HDAC6-205ENST00000423941 MUSKO15146 869 aa18.73■□□□□ 0.59
HDAC6-205ENST00000423941 MATN3O15232 486 aa18.73■□□□□ 0.59
HDAC6-205ENST00000423941 MAP3K13O43283 966 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms