RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 CAPN14A8MX76 684 aa13.53□□□□□ -0.24
MCF2L-213ENST00000421756 TRPA1O75762 1119 aa13.53□□□□□ -0.24
MCF2L-213ENST00000421756 HAPLN1P10915 354 aaPredicted RBP13.53□□□□□ -0.24
MCF2L-213ENST00000421756 CPB1P15086 417 aa13.53□□□□□ -0.24
MCF2L-213ENST00000421756 NELFEP18615 380 aaKnown RBP13.53□□□□□ -0.24
MCF2L-213ENST00000421756 AXLP30530 894 aa13.53□□□□□ -0.24
MCF2L-213ENST00000421756 KLC1Q07866 573 aa13.53□□□□□ -0.24
MCF2L-213ENST00000421756 SLC10A7Q0GE19 358 aa13.53□□□□□ -0.24
MCF2L-213ENST00000421756 UPP1Q16831 310 aa13.53□□□□□ -0.24
MCF2L-213ENST00000421756 ALFQ53S48 1182 aa13.53□□□□□ -0.24
MCF2L-213ENST00000421756 SPANXN3Q5MJ09 141 aa13.53□□□□□ -0.24
MCF2L-213ENST00000421756 GRTP1Q5TC63 336 aa13.53□□□□□ -0.24
MCF2L-213ENST00000421756 CLEC6AQ6EIG7 209 aa13.53□□□□□ -0.24
MCF2L-213ENST00000421756 RCN3Q96D15 328 aa13.53□□□□□ -0.24
MCF2L-213ENST00000421756 TBL1YQ9BQ87 522 aa13.53□□□□□ -0.24
MCF2L-213ENST00000421756 GBA3Q9H227 469 aa13.53□□□□□ -0.24
MCF2L-213ENST00000421756 MYOCOSA0A1B0GUC4 107 aa13.53□□□□□ -0.24
MCF2L-213ENST00000421756 GABRDO14764 452 aa13.53□□□□□ -0.24
MCF2L-213ENST00000421756 RPL17P18621 184 aaKnown RBP13.53□□□□□ -0.24
MCF2L-213ENST00000421756 SLC1A2P43004 574 aa13.53□□□□□ -0.24
MCF2L-213ENST00000421756 PPIDQ08752 370 aaKnown RBP13.53□□□□□ -0.24
MCF2L-213ENST00000421756 GALNT3Q14435 633 aa13.53□□□□□ -0.24
MCF2L-213ENST00000421756 PAFAH1B3Q15102 231 aaKnown RBP13.53□□□□□ -0.24
MCF2L-213ENST00000421756 C10orf120Q5SQS8 335 aa13.53□□□□□ -0.24
MCF2L-213ENST00000421756 NAPEPLDQ6IQ20 393 aa13.53□□□□□ -0.24
MCF2L-213ENST00000421756 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.53□□□□□ -0.243e-6■□□□□ 10.2
MCF2L-213ENST00000421756 PSMG2Q969U7 264 aa13.53□□□□□ -0.24
MCF2L-213ENST00000421756 RPRD1AQ96P16 312 aaPredicted RBP13.53□□□□□ -0.24
MCF2L-213ENST00000421756 SLC2A13Q96QE2 648 aa13.53□□□□□ -0.24
MCF2L-213ENST00000421756 KATNAL1Q9BW62 490 aa13.53□□□□□ -0.24
MCF2L-213ENST00000421756 ILKAPQ9H0C8 392 aaPredicted RBP13.53□□□□□ -0.24
MCF2L-213ENST00000421756 IRF1P10914 325 aa13.53□□□□□ -0.24
MCF2L-213ENST00000421756 ADAM17P78536 824 aa13.53□□□□□ -0.24
MCF2L-213ENST00000421756 CDC42EP1Q00587 391 aa13.53□□□□□ -0.24
MCF2L-213ENST00000421756 PLIN5Q00G26 463 aa13.53□□□□□ -0.24
MCF2L-213ENST00000421756 NAIF1Q69YI7 327 aaPredicted RBP13.53□□□□□ -0.24
MCF2L-213ENST00000421756 SCIMPQ6UWF3 145 aa13.53□□□□□ -0.24
MCF2L-213ENST00000421756 ZNF467Q7Z7K2 595 aaPredicted RBP13.53□□□□□ -0.24
MCF2L-213ENST00000421756 FAM193BQ96PV7 902 aaPredicted RBP13.53□□□□□ -0.24
MCF2L-213ENST00000421756 SARS2Q9NP81 518 aaKnown RBP13.53□□□□□ -0.24
MCF2L-213ENST00000421756 CCDC167Q9P0B6 97 aa13.53□□□□□ -0.24
MCF2L-213ENST00000421756 ACOT9Q9Y305 439 aa13.53□□□□□ -0.24
MCF2L-213ENST00000421756 BNIP3LO60238 219 aa13.52□□□□□ -0.24
MCF2L-213ENST00000421756 SKIP12755 728 aa13.52□□□□□ -0.24
MCF2L-213ENST00000421756 FGFR3P22607 806 aa13.52□□□□□ -0.24
MCF2L-213ENST00000421756 PEX2P28328 305 aa13.52□□□□□ -0.24
MCF2L-213ENST00000421756 CASP2P42575 452 aa13.52□□□□□ -0.24
MCF2L-213ENST00000421756 PRKCZQ05513 592 aa13.52□□□□□ -0.24
MCF2L-213ENST00000421756 LSM12Q3MHD2 195 aaKnown RBP13.52□□□□□ -0.24
MCF2L-213ENST00000421756 GCNAQ96QF7 691 aa13.52□□□□□ -0.24
MCF2L-213ENST00000421756 SLC39A3Q9BRY0 314 aa13.52□□□□□ -0.24
MCF2L-213ENST00000421756 TUBB6Q9BUF5 446 aa13.52□□□□□ -0.24
MCF2L-213ENST00000421756 SP110Q9HB58 689 aa13.52□□□□□ -0.24
MCF2L-213ENST00000421756 ARHGEF38Q9NXL2 777 aa13.52□□□□□ -0.24
MCF2L-213ENST00000421756 GMIPQ9P107 970 aa13.52□□□□□ -0.24
MCF2L-213ENST00000421756 IGSF9Q9P2J2 1179 aa13.52□□□□□ -0.24
MCF2L-213ENST00000421756 CDH9Q9ULB4 789 aa13.52□□□□□ -0.24
MCF2L-213ENST00000421756 PTGDR2Q9Y5Y4 395 aa13.52□□□□□ -0.24
MCF2L-213ENST00000421756 A0A088AWK7 358 aa13.52□□□□□ -0.25
MCF2L-213ENST00000421756 LRRC14BA6NHZ5 514 aa13.52□□□□□ -0.25
MCF2L-213ENST00000421756 TADA2AO75478 443 aa13.52□□□□□ -0.25
MCF2L-213ENST00000421756 TM7SF2O76062 418 aa13.52□□□□□ -0.25
MCF2L-213ENST00000421756 ETS2P15036 469 aa13.52□□□□□ -0.25
MCF2L-213ENST00000421756 RAG1P15918 1043 aa13.52□□□□□ -0.25
MCF2L-213ENST00000421756 TFEBP19484 476 aa13.52□□□□□ -0.25
MCF2L-213ENST00000421756 WNT3AP56704 352 aa13.52□□□□□ -0.25
MCF2L-213ENST00000421756 PRAMEP78395 509 aa13.52□□□□□ -0.25
MCF2L-213ENST00000421756 INTS6LQ5JSJ4 861 aaKnown RBP13.52□□□□□ -0.25
MCF2L-213ENST00000421756 THEMIS2Q5TEJ8 643 aa13.52□□□□□ -0.25
MCF2L-213ENST00000421756 CYP2R1Q6VVX0 501 aa13.52□□□□□ -0.25
MCF2L-213ENST00000421756 THEM5Q8N1Q8 247 aa13.52□□□□□ -0.25
MCF2L-213ENST00000421756 SREK1Q8WXA9 508 aaKnown RBP13.52□□□□□ -0.25
MCF2L-213ENST00000421756 FAXDC2Q96IV6 333 aa13.52□□□□□ -0.25
MCF2L-213ENST00000421756 ZNF333Q96JL9 665 aa13.52□□□□□ -0.25
MCF2L-213ENST00000421756 SEMA6AQ9H2E6 1030 aa13.52□□□□□ -0.25
MCF2L-213ENST00000421756 GTF2IRD1Q9UHL9 959 aa13.52□□□□□ -0.25
MCF2L-213ENST00000421756 CCDC160A6NGH7 325 aa13.52□□□□□ -0.25
MCF2L-213ENST00000421756 DDHD2O94830 711 aa13.52□□□□□ -0.25
MCF2L-213ENST00000421756 CCDC166P0CW27 439 aa13.52□□□□□ -0.25
MCF2L-213ENST00000421756 COX4I1P13073 169 aa13.52□□□□□ -0.25
MCF2L-213ENST00000421756 STMN1P16949 149 aa13.52□□□□□ -0.25
MCF2L-213ENST00000421756 KCNA5P22460 613 aa13.52□□□□□ -0.25
MCF2L-213ENST00000421756 AP2B1P63010 937 aa13.52□□□□□ -0.25
MCF2L-213ENST00000421756 PPP1R3AQ16821 1122 aa13.52□□□□□ -0.25
MCF2L-213ENST00000421756 MMEL1Q495T6 779 aa13.52□□□□□ -0.25
MCF2L-213ENST00000421756 MORN1Q5T089 497 aa13.52□□□□□ -0.25
MCF2L-213ENST00000421756 TAF2Q6P1X5 1199 aa13.52□□□□□ -0.25
MCF2L-213ENST00000421756 MFSD6LQ8IWD5 586 aa13.52□□□□□ -0.25
MCF2L-213ENST00000421756 HMCESQ96FZ2 354 aa13.52□□□□□ -0.25
MCF2L-213ENST00000421756 MTG1Q9BT17 334 aaPredicted RBP13.52□□□□□ -0.25
MCF2L-213ENST00000421756 MAF1Q9H063 256 aa13.52□□□□□ -0.25
MCF2L-213ENST00000421756 POMKQ9H5K3 350 aa13.52□□□□□ -0.25
MCF2L-213ENST00000421756 ALG9Q9H6U8 611 aa13.52□□□□□ -0.25
MCF2L-213ENST00000421756 DSEQ9UL01 958 aa13.52□□□□□ -0.25
MCF2L-213ENST00000421756 A8MX80 341 aa13.51□□□□□ -0.25
MCF2L-213ENST00000421756 G3V2L1 256 aa13.51□□□□□ -0.25
MCF2L-213ENST00000421756 PEX1O43933 1283 aa13.51□□□□□ -0.25
MCF2L-213ENST00000421756 SUPT7LO94864 414 aa13.51□□□□□ -0.25
MCF2L-213ENST00000421756 FBXO21O94952 628 aa13.51□□□□□ -0.25
MCF2L-213ENST00000421756 GSTA2P09210 222 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms