RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 KLQ9UEF7 1012 aa12.49□□□□□ -0.41
CLCN4-203ENST00000421085 TCRBV5S4A2TA0A5A2 114 aa12.49□□□□□ -0.41
CLCN4-203ENST00000421085 LOC110117498-PIK3R3F6TDL0 507 aa12.49□□□□□ -0.41
CLCN4-203ENST00000421085 TIPRLO75663 272 aa12.49□□□□□ -0.41
CLCN4-203ENST00000421085 CCNKO75909 580 aa12.49□□□□□ -0.41
CLCN4-203ENST00000421085 VIL1P09327 827 aaKnown RBP12.49□□□□□ -0.41
CLCN4-203ENST00000421085 BOP1Q14137 746 aaKnown RBP12.49□□□□□ -0.41
CLCN4-203ENST00000421085 NEPROQ6NW34 567 aa12.49□□□□□ -0.41
CLCN4-203ENST00000421085 OTOP1Q7RTM1 612 aa12.49□□□□□ -0.41
CLCN4-203ENST00000421085 PROSER1Q86XN7 944 aa12.49□□□□□ -0.41
CLCN4-203ENST00000421085 INPP4AQ96PE3 977 aaPredicted RBP12.49□□□□□ -0.41
CLCN4-203ENST00000421085 CDH19Q9H159 772 aa12.49□□□□□ -0.41
CLCN4-203ENST00000421085 BTRCQ9Y297 605 aa12.49□□□□□ -0.41
CLCN4-203ENST00000421085 RAMP2O60895 175 aa12.49□□□□□ -0.41
CLCN4-203ENST00000421085 PPP3CAQ08209 521 aa12.49□□□□□ -0.41
CLCN4-203ENST00000421085 ECHDC2Q86YB7 292 aa12.49□□□□□ -0.41
CLCN4-203ENST00000421085 PGBD3Q8N328 593 aa12.49□□□□□ -0.41
CLCN4-203ENST00000421085 KCTD4Q8WVF5 259 aa12.49□□□□□ -0.41
CLCN4-203ENST00000421085 CCDC28BQ9BUN5 200 aa12.49□□□□□ -0.41
CLCN4-203ENST00000421085 IL17RBQ9NRM6 502 aa12.49□□□□□ -0.41
CLCN4-203ENST00000421085 RPS6KA6Q9UK32 745 aa12.49□□□□□ -0.41
CLCN4-203ENST00000421085 A0A0A0MRY4 1105 aa12.49□□□□□ -0.41
CLCN4-203ENST00000421085 FAM237AA0A1B0GTK4 181 aa12.49□□□□□ -0.41
CLCN4-203ENST00000421085 TMEM150BA6NC51 233 aa12.49□□□□□ -0.41
CLCN4-203ENST00000421085 ANKRD63C9JTQ0 380 aa12.49□□□□□ -0.41
CLCN4-203ENST00000421085 DNM1LO00429 736 aa12.49□□□□□ -0.41
CLCN4-203ENST00000421085 SHOX2O60902 331 aaPredicted RBP12.49□□□□□ -0.41
CLCN4-203ENST00000421085 PAEPP09466 180 aa12.49□□□□□ -0.41
CLCN4-203ENST00000421085 PRKAR1AP10644 381 aa12.49□□□□□ -0.41
CLCN4-203ENST00000421085 C15orf59Q2T9L4 293 aaPredicted RBP12.49□□□□□ -0.41
CLCN4-203ENST00000421085 PAGE2BQ5JRK9 111 aa12.49□□□□□ -0.41
CLCN4-203ENST00000421085 ZNF549Q6P9A3 640 aa12.49□□□□□ -0.41
CLCN4-203ENST00000421085 HPS6Q86YV9 775 aa12.49□□□□□ -0.41
CLCN4-203ENST00000421085 ADCY4Q8NFM4 1077 aa12.49□□□□□ -0.41
CLCN4-203ENST00000421085 MCFD2Q8NI22 146 aa12.49□□□□□ -0.41
CLCN4-203ENST00000421085 ACMSDQ8TDX5 336 aa12.49□□□□□ -0.41
CLCN4-203ENST00000421085 SPATA13Q96N96 652 aa12.49□□□□□ -0.41
CLCN4-203ENST00000421085 FDXACB1Q9BRP7 624 aaPredicted RBP12.49□□□□□ -0.41
CLCN4-203ENST00000421085 TMEM138Q9NPI0 162 aa12.49□□□□□ -0.41
CLCN4-203ENST00000421085 DGKBQ9Y6T7 804 aa12.49□□□□□ -0.41
CLCN4-203ENST00000421085 NTRK1P04629 796 aa12.48□□□□□ -0.41
CLCN4-203ENST00000421085 CYP4B1P13584 511 aa12.48□□□□□ -0.41
CLCN4-203ENST00000421085 RCVRNP35243 200 aa12.48□□□□□ -0.41
CLCN4-203ENST00000421085 PSMD4P55036 377 aaKnown RBP12.48□□□□□ -0.41
CLCN4-203ENST00000421085 USP4Q13107 963 aa12.48□□□□□ -0.41
CLCN4-203ENST00000421085 CARTPTQ16568 116 aa12.48□□□□□ -0.41
CLCN4-203ENST00000421085 MOSPD2Q8NHP6 518 aa12.48□□□□□ -0.41
CLCN4-203ENST00000421085 GNEQ9Y223 722 aaKnown RBP12.48□□□□□ -0.41
CLCN4-203ENST00000421085 PCDHB7Q9Y5E2 793 aa12.48□□□□□ -0.41
CLCN4-203ENST00000421085 FRMPD4Q14CM0 1322 aa12.48□□□□□ -0.41
CLCN4-203ENST00000421085 UBE2QL1A1L167 161 aa12.48□□□□□ -0.41
CLCN4-203ENST00000421085 C17orf102A2RUQ5 167 aa12.48□□□□□ -0.41
CLCN4-203ENST00000421085 IFRD1O00458 451 aaPredicted RBP12.48□□□□□ -0.41
CLCN4-203ENST00000421085 RGS20O76081 388 aa12.48□□□□□ -0.41
CLCN4-203ENST00000421085 ITGA2BP08514 1039 aa12.48□□□□□ -0.41
CLCN4-203ENST00000421085 IL18R1Q13478 541 aa12.48□□□□□ -0.41
CLCN4-203ENST00000421085 ZFP69Q49AA0 526 aa12.48□□□□□ -0.41
CLCN4-203ENST00000421085 C5orf22Q49AR2 442 aa12.48□□□□□ -0.41
CLCN4-203ENST00000421085 PCID2Q5JVF3 399 aa12.48□□□□□ -0.41
CLCN4-203ENST00000421085 LDLRAP1Q5SW96 308 aa12.48□□□□□ -0.41
CLCN4-203ENST00000421085 LIPMQ5VYY2 423 aa12.48□□□□□ -0.41
CLCN4-203ENST00000421085 FITM2Q8N6M3 262 aa12.48□□□□□ -0.41
CLCN4-203ENST00000421085 COMMD9Q9P000 198 aa12.48□□□□□ -0.41
CLCN4-203ENST00000421085 DNAJB2P25686 324 aa12.48□□□□□ -0.41
CLCN4-203ENST00000421085 OR1E1P30953 314 aa12.48□□□□□ -0.41
CLCN4-203ENST00000421085 STARP49675 285 aa12.48□□□□□ -0.41
CLCN4-203ENST00000421085 HIRAP54198 1017 aaPredicted RBP12.48□□□□□ -0.41
CLCN4-203ENST00000421085 MAPKAPK3Q16644 382 aa12.48□□□□□ -0.41
CLCN4-203ENST00000421085 MTSS1LQ765P7 747 aa12.48□□□□□ -0.41
CLCN4-203ENST00000421085 ZFYVE28Q9HCC9 887 aa12.48□□□□□ -0.41
CLCN4-203ENST00000421085 CATSPERZQ9NTU4 200 aa12.48□□□□□ -0.41
CLCN4-203ENST00000421085 SNTG2Q9NY99 539 aa12.48□□□□□ -0.41
CLCN4-203ENST00000421085 ZNF221Q9UK13 617 aa12.48□□□□□ -0.41
CLCN4-203ENST00000421085 HGFP14210 728 aa12.48□□□□□ -0.41
CLCN4-203ENST00000421085 VCLP18206 1134 aa12.48□□□□□ -0.41
CLCN4-203ENST00000421085 BNC1Q01954 994 aa12.48□□□□□ -0.41
CLCN4-203ENST00000421085 FAM117BQ6P1L5 589 aa12.48□□□□□ -0.41
CLCN4-203ENST00000421085 DEPDC4Q8N2C3 294 aa12.48□□□□□ -0.41
CLCN4-203ENST00000421085 RBM15BQ8NDT2 890 aaKnown RBP12.48□□□□□ -0.41
CLCN4-203ENST00000421085 GMCL1P1Q8NEA9 526 aa12.48□□□□□ -0.41
CLCN4-203ENST00000421085 STAG3L4Q8TBR4 150 aa12.48□□□□□ -0.41
CLCN4-203ENST00000421085 STARD8Q92502 1023 aa12.48□□□□□ -0.41
CLCN4-203ENST00000421085 GMCL1Q96IK5 515 aa12.48□□□□□ -0.41
CLCN4-203ENST00000421085 Q96MT0 163 aa12.48□□□□□ -0.41
CLCN4-203ENST00000421085 VAT1Q99536 393 aa12.48□□□□□ -0.41
CLCN4-203ENST00000421085 NMUR2Q9GZQ4 415 aa12.48□□□□□ -0.41
CLCN4-203ENST00000421085 SIGLEC16A6NMB1 481 aa12.48□□□□□ -0.41
CLCN4-203ENST00000421085 G3V2T6 193 aa12.48□□□□□ -0.41
CLCN4-203ENST00000421085 PLCL1Q15111 1095 aa12.48□□□□□ -0.41
CLCN4-203ENST00000421085 MED22Q15528 200 aa12.48□□□□□ -0.41
CLCN4-203ENST00000421085 ACE2Q9BYF1 805 aaPredicted RBP12.48□□□□□ -0.41
CLCN4-203ENST00000421085 PCDH12Q9NPG4 1184 aa12.48□□□□□ -0.41
CLCN4-203ENST00000421085 PTGFRNQ9P2B2 879 aa12.48□□□□□ -0.41
CLCN4-203ENST00000421085 RAPGEFL1Q9UHV5 662 aa12.48□□□□□ -0.41
CLCN4-203ENST00000421085 TIMM13Q9Y5L4 95 aaPredicted RBP12.48□□□□□ -0.41
CLCN4-203ENST00000421085 TCRBV9S1A1TA0A576 114 aa12.47□□□□□ -0.41
CLCN4-203ENST00000421085 CCDC162PA2VCL2 907 aa12.47□□□□□ -0.41
CLCN4-203ENST00000421085 ACLYP53396 1101 aa12.47□□□□□ -0.41
CLCN4-203ENST00000421085 IL2P60568 153 aa12.47□□□□□ -0.41
CLCN4-203ENST00000421085 GALNT18Q6P9A2 607 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms