RNA–Protein interactions for RNA: ENST00000419500.1

HMGN1P4-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 4, humanhuman

BASIC

Gene HMGN1P4, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P4-201ENST00000419500 HLA-BQ31612 363 aa12.96□□□□□ -0.33
HMGN1P4-201ENST00000419500 SLC45A4Q5BKX6 768 aa12.96□□□□□ -0.33
HMGN1P4-201ENST00000419500 ARSIQ5FYB1 569 aa12.96□□□□□ -0.33
HMGN1P4-201ENST00000419500 PPP6R3Q5H9R7 873 aaPredicted RBP12.96□□□□□ -0.33
HMGN1P4-201ENST00000419500 CCDC122Q5T0U0 273 aa12.96□□□□□ -0.33
HMGN1P4-201ENST00000419500 LAYNQ6UX15 382 aa12.96□□□□□ -0.33
HMGN1P4-201ENST00000419500 PRPF39Q86UA1 669 aaKnown RBP12.96□□□□□ -0.33
HMGN1P4-201ENST00000419500 PSTKQ8IV42 348 aaKnown RBP12.96□□□□□ -0.33
HMGN1P4-201ENST00000419500 OR2AP1Q8NGE2 309 aa12.96□□□□□ -0.33
HMGN1P4-201ENST00000419500 SERAC1Q96JX3 654 aa12.96□□□□□ -0.33
HMGN1P4-201ENST00000419500 PEBP4Q96S96 227 aa12.96□□□□□ -0.33
HMGN1P4-201ENST00000419500 HEPHQ9BQS7 1158 aa12.96□□□□□ -0.33
HMGN1P4-201ENST00000419500 NUP85Q9BW27 656 aa12.96□□□□□ -0.33
HMGN1P4-201ENST00000419500 ARHGAP20Q9P2F6 1191 aa12.96□□□□□ -0.33
HMGN1P4-201ENST00000419500 ANKRD6Q9Y2G4 727 aa12.96□□□□□ -0.33
HMGN1P4-201ENST00000419500 ACTL7AQ9Y615 435 aa12.96□□□□□ -0.33
HMGN1P4-201ENST00000419500 KRIT1O00522 736 aa12.95□□□□□ -0.34
HMGN1P4-201ENST00000419500 GIPC1O14908 333 aa12.95□□□□□ -0.34
HMGN1P4-201ENST00000419500 ZNF821O75541 412 aaPredicted RBP12.95□□□□□ -0.34
HMGN1P4-201ENST00000419500 GJB3O75712 270 aa12.95□□□□□ -0.34
HMGN1P4-201ENST00000419500 TMCC1O94876 653 aa12.95□□□□□ -0.34
HMGN1P4-201ENST00000419500 CD160O95971 181 aa12.95□□□□□ -0.34
HMGN1P4-201ENST00000419500 ITGB7P26010 798 aa12.95□□□□□ -0.34
HMGN1P4-201ENST00000419500 CD38P28907 300 aa12.95□□□□□ -0.34
HMGN1P4-201ENST00000419500 HNRNPH3P31942 346 aaKnown RBP12.95□□□□□ -0.34
HMGN1P4-201ENST00000419500 PCK1P35558 622 aa12.95□□□□□ -0.34
HMGN1P4-201ENST00000419500 NUDT1P36639 197 aa12.95□□□□□ -0.34
HMGN1P4-201ENST00000419500 NEK3P51956 506 aa12.95□□□□□ -0.34
HMGN1P4-201ENST00000419500 ZNF135P52742 658 aaPredicted RBP12.95□□□□□ -0.34
HMGN1P4-201ENST00000419500 NDST2P52849 883 aa12.95□□□□□ -0.34
HMGN1P4-201ENST00000419500 SNRPD1P62314 119 aaKnown RBP12.95□□□□□ -0.34
HMGN1P4-201ENST00000419500 PIGHQ14442 188 aaPredicted RBP12.95□□□□□ -0.34
HMGN1P4-201ENST00000419500 CA9Q16790 459 aa12.95□□□□□ -0.34
HMGN1P4-201ENST00000419500 KIF19Q2TAC6 998 aa12.95□□□□□ -0.34
HMGN1P4-201ENST00000419500 SETMARQ53H47 684 aaPredicted RBP12.95□□□□□ -0.34
HMGN1P4-201ENST00000419500 PIP5KL1Q5T9C9 394 aa12.95□□□□□ -0.34
HMGN1P4-201ENST00000419500 N4BP2L1Q5TBK1 243 aaPredicted RBP12.95□□□□□ -0.34
HMGN1P4-201ENST00000419500 FBXL19Q6PCT2 694 aa12.95□□□□□ -0.34
HMGN1P4-201ENST00000419500 RFX8Q6ZV50 586 aa12.95□□□□□ -0.34
HMGN1P4-201ENST00000419500 ERN2Q76MJ5 926 aaKnown RBP12.95□□□□□ -0.34
HMGN1P4-201ENST00000419500 TRIM69Q86WT6 500 aa12.95□□□□□ -0.34
HMGN1P4-201ENST00000419500 NAXDQ8IW45 347 aa12.95□□□□□ -0.34
HMGN1P4-201ENST00000419500 UMODL1-AS1Q8N2C9 162 aa12.95□□□□□ -0.34
HMGN1P4-201ENST00000419500 ARFGAP1Q8N6T3 406 aa12.95□□□□□ -0.34
HMGN1P4-201ENST00000419500 OR8K1Q8NGG5 319 aa12.95□□□□□ -0.34
HMGN1P4-201ENST00000419500 OR6K2Q8NGY2 324 aa12.95□□□□□ -0.34
HMGN1P4-201ENST00000419500 CASKIN2Q8WXE0 1202 aa12.95□□□□□ -0.34
HMGN1P4-201ENST00000419500 ARRDC3Q96B67 414 aa12.95□□□□□ -0.34
HMGN1P4-201ENST00000419500 HMCESQ96FZ2 354 aa12.95□□□□□ -0.34
HMGN1P4-201ENST00000419500 GDAP1L1Q96MZ0 367 aa12.95□□□□□ -0.34
HMGN1P4-201ENST00000419500 KCTD15Q96SI1 283 aaPredicted RBP12.95□□□□□ -0.34
HMGN1P4-201ENST00000419500 ORAI3Q9BRQ5 295 aa12.95□□□□□ -0.34
HMGN1P4-201ENST00000419500 HDAC8Q9BY41 377 aa12.95□□□□□ -0.34
HMGN1P4-201ENST00000419500 NOL6Q9H6R4 1146 aaKnown RBP12.95□□□□□ -0.34
HMGN1P4-201ENST00000419500 ZWILCHQ9H900 591 aa12.95□□□□□ -0.34
HMGN1P4-201ENST00000419500 IL21RQ9HBE5 538 aa12.95□□□□□ -0.34
HMGN1P4-201ENST00000419500 TM7SF3Q9NS93 570 aa12.95□□□□□ -0.34
HMGN1P4-201ENST00000419500 IP6K2Q9UHH9 426 aa12.95□□□□□ -0.34
HMGN1P4-201ENST00000419500 DMTF1Q9Y222 760 aa12.95□□□□□ -0.34
HMGN1P4-201ENST00000419500 FNDC3AQ9Y2H6 1198 aaKnown RBP12.95□□□□□ -0.34
HMGN1P4-201ENST00000419500 SNX11Q9Y5W9 270 aa12.95□□□□□ -0.34
HMGN1P4-201ENST00000419500 CACNA1EQ15878 2313 aa12.94□□□□□ -0.34
HMGN1P4-201ENST00000419500 VILLO15195 856 aa12.94□□□□□ -0.34
HMGN1P4-201ENST00000419500 LATO43561 262 aa12.94□□□□□ -0.34
HMGN1P4-201ENST00000419500 RNGTTO60942 597 aaKnown RBP12.94□□□□□ -0.34
HMGN1P4-201ENST00000419500 IGSF6O95976 241 aa12.94□□□□□ -0.34
HMGN1P4-201ENST00000419500 GSRP00390 522 aa12.94□□□□□ -0.34
HMGN1P4-201ENST00000419500 CYP1A2P05177 515 aa12.94□□□□□ -0.34
HMGN1P4-201ENST00000419500 ZNF883P0CG24 379 aa12.94□□□□□ -0.34
HMGN1P4-201ENST00000419500 CD59P13987 128 aa12.94□□□□□ -0.34
HMGN1P4-201ENST00000419500 EIF4A3P38919 411 aaKnown RBP12.94□□□□□ -0.34
HMGN1P4-201ENST00000419500 ARL4AP40617 200 aa12.94□□□□□ -0.34
HMGN1P4-201ENST00000419500 SSR1P43307 286 aaKnown RBP12.94□□□□□ -0.34
HMGN1P4-201ENST00000419500 CCT8P50990 548 aa12.94□□□□□ -0.34
HMGN1P4-201ENST00000419500 TAS2R38P59533 333 aa12.94□□□□□ -0.34
HMGN1P4-201ENST00000419500 RHOAP61586 193 aa12.94□□□□□ -0.34
HMGN1P4-201ENST00000419500 BNC1Q01954 994 aa12.94□□□□□ -0.34
HMGN1P4-201ENST00000419500 SERINC3Q13530 473 aa12.94□□□□□ -0.34
HMGN1P4-201ENST00000419500 HNRNPDQ14103 355 aaKnown RBP12.94□□□□□ -0.34
HMGN1P4-201ENST00000419500 SMTNL2Q2TAL5 461 aa12.94□□□□□ -0.34
HMGN1P4-201ENST00000419500 INO80DQ53TQ3 878 aaPredicted RBP12.94□□□□□ -0.34
HMGN1P4-201ENST00000419500 NAPEPLDQ6IQ20 393 aa12.94□□□□□ -0.34
HMGN1P4-201ENST00000419500 PIP4P1Q86T03 277 aa12.94□□□□□ -0.34
HMGN1P4-201ENST00000419500 VSTM4Q8IW00 320 aa12.94□□□□□ -0.34
HMGN1P4-201ENST00000419500 PLPP6Q8IY26 295 aa12.94□□□□□ -0.34
HMGN1P4-201ENST00000419500 CTNNBL1Q8WYA6 563 aaPredicted RBP12.94□□□□□ -0.34
HMGN1P4-201ENST00000419500 HSPH1Q92598 858 aa12.94□□□□□ -0.34
HMGN1P4-201ENST00000419500 CELF6Q96J87 481 aaKnown RBP12.94□□□□□ -0.34
HMGN1P4-201ENST00000419500 LRIG1Q96JA1 1093 aa12.94□□□□□ -0.34
HMGN1P4-201ENST00000419500 DNAJC7Q99615 494 aa12.94□□□□□ -0.34
HMGN1P4-201ENST00000419500 OSBPL1AQ9BXW6 950 aa12.94□□□□□ -0.34
HMGN1P4-201ENST00000419500 EBF2Q9HAK2 575 aa12.94□□□□□ -0.34
HMGN1P4-201ENST00000419500 ABHD10Q9NUJ1 306 aa12.94□□□□□ -0.34
HMGN1P4-201ENST00000419500 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.94□□□□□ -0.34
HMGN1P4-201ENST00000419500 PCDHB9Q9Y5E1 797 aa12.94□□□□□ -0.34
HMGN1P4-201ENST00000419500 WASF2Q9Y6W5 498 aa12.94□□□□□ -0.34
HMGN1P4-201ENST00000419500 CHD5Q8TDI0 1954 aa12.94□□□□□ -0.34
HMGN1P4-201ENST00000419500 SPTBN2O15020 2390 aa12.93□□□□□ -0.34
HMGN1P4-201ENST00000419500 A0A1W2PQU0 124 aa12.93□□□□□ -0.34
HMGN1P4-201ENST00000419500 ARHGAP42A6NI28 874 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms