RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 MAGEA3P43357 314 aa6.06□□□□□ -1.44
HMGB3-202ENST00000419110 MAPK8P45983 427 aa6.06□□□□□ -1.44
HMGB3-202ENST00000419110 ITKQ08881 620 aa6.06□□□□□ -1.44
HMGB3-202ENST00000419110 ZNF844Q08AG5 666 aa6.06□□□□□ -1.44
HMGB3-202ENST00000419110 CDH17Q12864 832 aa6.06□□□□□ -1.44
HMGB3-202ENST00000419110 SLC12A1Q13621 1099 aa6.06□□□□□ -1.44
HMGB3-202ENST00000419110 LBRQ14739 615 aaKnown RBP6.06□□□□□ -1.44
HMGB3-202ENST00000419110 STAT4Q14765 748 aa6.06□□□□□ -1.44
HMGB3-202ENST00000419110 FASTKD3Q14CZ7 662 aaKnown RBP6.06□□□□□ -1.44
HMGB3-202ENST00000419110 TCEAL5Q5H9L2 206 aa6.06□□□□□ -1.44
HMGB3-202ENST00000419110 SYCP2LQ5T4T6 812 aa6.06□□□□□ -1.44
HMGB3-202ENST00000419110 ARMC3Q5W041 872 aa6.06□□□□□ -1.44
HMGB3-202ENST00000419110 RNF219Q5W0B1 726 aaPredicted RBP6.06□□□□□ -1.44
HMGB3-202ENST00000419110 CXorf57Q6NSI4 855 aaKnown RBP6.06□□□□□ -1.44
HMGB3-202ENST00000419110 CES5AQ6NT32 575 aa6.06□□□□□ -1.44
HMGB3-202ENST00000419110 RETSATQ6NUM9 610 aa6.06□□□□□ -1.44
HMGB3-202ENST00000419110 ANKRD54Q6NXT1 300 aa6.06□□□□□ -1.44
HMGB3-202ENST00000419110 LRRC8BQ6P9F7 803 aa6.06□□□□□ -1.44
HMGB3-202ENST00000419110 CAPN12Q6ZSI9 719 aa6.06□□□□□ -1.44
HMGB3-202ENST00000419110 ZNF534Q76KX8 674 aa6.06□□□□□ -1.44
HMGB3-202ENST00000419110 CCNJLQ8IV13 435 aa6.06□□□□□ -1.44
HMGB3-202ENST00000419110 ANKMY2Q8IV38 441 aa6.06□□□□□ -1.44
HMGB3-202ENST00000419110 NPAS3Q8IXF0 933 aa6.06□□□□□ -1.44
HMGB3-202ENST00000419110 CNPY4Q8N129 248 aa6.06□□□□□ -1.44
HMGB3-202ENST00000419110 CELF5Q8N6W0 485 aaKnown RBP6.06□□□□□ -1.44
HMGB3-202ENST00000419110 DNAAF3Q8N9W5 541 aa6.06□□□□□ -1.44
HMGB3-202ENST00000419110 PPHLN1Q8NEY8 458 aaKnown RBP6.06□□□□□ -1.44
HMGB3-202ENST00000419110 VN1R2Q8NFZ6 395 aa6.06□□□□□ -1.44
HMGB3-202ENST00000419110 OR7D4Q8NG98 312 aa6.06□□□□□ -1.44
HMGB3-202ENST00000419110 ADAMTS19Q8TE59 1207 aa6.06□□□□□ -1.44
HMGB3-202ENST00000419110 USP13Q92995 863 aaPredicted RBP6.06□□□□□ -1.44
HMGB3-202ENST00000419110 BHMTQ93088 406 aa6.06□□□□□ -1.44
HMGB3-202ENST00000419110 WBP2Q969T9 261 aa6.06□□□□□ -1.44
HMGB3-202ENST00000419110 TMA16Q96EY4 203 aaKnown RBP6.06□□□□□ -1.44
HMGB3-202ENST00000419110 MYEOVQ96EZ4 313 aa6.06□□□□□ -1.44
HMGB3-202ENST00000419110 STAMBPL1Q96FJ0 436 aa6.06□□□□□ -1.44
HMGB3-202ENST00000419110 RIPOR3Q96MK2 946 aa6.06□□□□□ -1.44
HMGB3-202ENST00000419110 FCRL5Q96RD9 977 aa6.06□□□□□ -1.44
HMGB3-202ENST00000419110 CYP2S1Q96SQ9 504 aa6.06□□□□□ -1.44
HMGB3-202ENST00000419110 SPON2Q9BUD6 331 aa6.06□□□□□ -1.44
HMGB3-202ENST00000419110 FICDQ9BVA6 458 aa6.06□□□□□ -1.44
HMGB3-202ENST00000419110 SLC46A2Q9BY10 475 aa6.06□□□□□ -1.44
HMGB3-202ENST00000419110 SMG9Q9H0W8 520 aaKnown RBP6.06□□□□□ -1.44
HMGB3-202ENST00000419110 SLC25A51Q9H1U9 297 aa6.06□□□□□ -1.44
HMGB3-202ENST00000419110 SEMA4AQ9H3S1 761 aa6.06□□□□□ -1.44
HMGB3-202ENST00000419110 IGFLR1Q9H665 355 aa6.06□□□□□ -1.44
HMGB3-202ENST00000419110 PDFQ9HBH1 243 aa6.06□□□□□ -1.44
HMGB3-202ENST00000419110 RBM22Q9NW64 420 aaKnown RBP eCLIP6.06□□□□□ -1.44
HMGB3-202ENST00000419110 GDE1Q9NZC3 331 aa6.06□□□□□ -1.44
HMGB3-202ENST00000419110 BFARQ9NZS9 450 aa6.06□□□□□ -1.44
HMGB3-202ENST00000419110 OGFRQ9NZT2 677 aa6.06□□□□□ -1.44
HMGB3-202ENST00000419110 PSMC3IPQ9P2W1 217 aaPredicted RBP6.06□□□□□ -1.44
HMGB3-202ENST00000419110 ZC3H7BQ9UGR2 993 aaKnown RBP6.06□□□□□ -1.44
HMGB3-202ENST00000419110 SLC25A13Q9UJS0 675 aa6.06□□□□□ -1.44
HMGB3-202ENST00000419110 TBC1D30Q9Y2I9 924 aa6.06□□□□□ -1.44
HMGB3-202ENST00000419110 MAD1L1Q9Y6D9 718 aa6.06□□□□□ -1.44
HMGB3-202ENST00000419110 IKBKGQ9Y6K9 419 aa6.06□□□□□ -1.44
HMGB3-202ENST00000419110 SMIM23A6NLE4 172 aa6.05□□□□□ -1.44
HMGB3-202ENST00000419110 NEDD8-MDP1E9PL57 170 aa6.05□□□□□ -1.44
HMGB3-202ENST00000419110 H3BQF6 201 aa6.05□□□□□ -1.44
HMGB3-202ENST00000419110 J3KR12 359 aa6.05□□□□□ -1.44
HMGB3-202ENST00000419110 TNFRSF10AO00220 468 aa6.05□□□□□ -1.44
HMGB3-202ENST00000419110 GFRA2O00451 464 aa6.05□□□□□ -1.44
HMGB3-202ENST00000419110 RASGRF2O14827 1237 aa6.05□□□□□ -1.44
HMGB3-202ENST00000419110 RGS16O15492 202 aaPredicted RBP6.05□□□□□ -1.44
HMGB3-202ENST00000419110 KDELR3O43731 214 aa6.05□□□□□ -1.44
HMGB3-202ENST00000419110 GREM1O60565 184 aa6.05□□□□□ -1.44
HMGB3-202ENST00000419110 CDH16O75309 829 aa6.05□□□□□ -1.44
HMGB3-202ENST00000419110 BANF1O75531 89 aa6.05□□□□□ -1.44
HMGB3-202ENST00000419110 TMCC1O94876 653 aa6.05□□□□□ -1.44
HMGB3-202ENST00000419110 GLP2RO95838 553 aa6.05□□□□□ -1.44
HMGB3-202ENST00000419110 IGSF6O95976 241 aa6.05□□□□□ -1.44
HMGB3-202ENST00000419110 FGF1P05230 155 aa6.05□□□□□ -1.44
HMGB3-202ENST00000419110 SERPINF2P08697 491 aa6.05□□□□□ -1.44
HMGB3-202ENST00000419110 ADH5P11766 374 aa6.05□□□□□ -1.44
HMGB3-202ENST00000419110 HLA-DPA1P20036 260 aa6.05□□□□□ -1.44
HMGB3-202ENST00000419110 WEE1P30291 646 aa6.05□□□□□ -1.44
HMGB3-202ENST00000419110 CD68P34810 354 aaPredicted RBP6.05□□□□□ -1.44
HMGB3-202ENST00000419110 ELK3P41970 407 aa6.05□□□□□ -1.44
HMGB3-202ENST00000419110 CD86P42081 329 aa6.05□□□□□ -1.44
HMGB3-202ENST00000419110 MTHFRP42898 656 aa6.05□□□□□ -1.44
HMGB3-202ENST00000419110 SERPINH1P50454 418 aaKnown RBP6.05□□□□□ -1.44
HMGB3-202ENST00000419110 SESN2P58004 480 aaPredicted RBP6.05□□□□□ -1.44
HMGB3-202ENST00000419110 RHOAP61586 193 aa6.05□□□□□ -1.44
HMGB3-202ENST00000419110 GAD2Q05329 585 aa6.05□□□□□ -1.44
HMGB3-202ENST00000419110 TNK2Q07912 1038 aa6.05□□□□□ -1.44
HMGB3-202ENST00000419110 HYAL1Q12794 435 aa6.05□□□□□ -1.44
HMGB3-202ENST00000419110 NR1H3Q13133 447 aa6.05□□□□□ -1.44
HMGB3-202ENST00000419110 NAB1Q13506 487 aa6.05□□□□□ -1.44
HMGB3-202ENST00000419110 SEPT6Q14141 434 aa6.05□□□□□ -1.44
HMGB3-202ENST00000419110 SLC29A2Q14542 456 aa6.05□□□□□ -1.44
HMGB3-202ENST00000419110 DMC1Q14565 340 aa6.05□□□□□ -1.44
HMGB3-202ENST00000419110 TMED2Q15363 201 aa6.05□□□□□ -1.44
HMGB3-202ENST00000419110 PCSK7Q16549 785 aa6.05□□□□□ -1.44
HMGB3-202ENST00000419110 KYNUQ16719 465 aa6.05□□□□□ -1.44
HMGB3-202ENST00000419110 RALGPS1Q5JS13 557 aa6.05□□□□□ -1.44
HMGB3-202ENST00000419110 FNBP1LQ5T0N5 605 aa6.05□□□□□ -1.44
HMGB3-202ENST00000419110 ARTNQ5T4W7 220 aa6.05□□□□□ -1.44
HMGB3-202ENST00000419110 AGBL2Q5U5Z8 902 aa6.05□□□□□ -1.44
HMGB3-202ENST00000419110 RNF43Q68DV7 783 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms