RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 IPMKQ8NFU5 416 aa15.39■□□□□ 0.05
SEMA3B-203ENST00000419007 DTNBP1Q96EV8 351 aa15.39■□□□□ 0.05
SEMA3B-203ENST00000419007 CNDP1Q96KN2 507 aa15.39■□□□□ 0.05
SEMA3B-203ENST00000419007 ZNF560Q96MR9 790 aa15.39■□□□□ 0.05
SEMA3B-203ENST00000419007 GBA3Q9H227 469 aa15.39■□□□□ 0.05
SEMA3B-203ENST00000419007 ZBTB26Q9HCK0 441 aa15.39■□□□□ 0.05
SEMA3B-203ENST00000419007 EPS15L1Q9UBC2 864 aa15.39■□□□□ 0.05
SEMA3B-203ENST00000419007 HNRNPRO43390 633 aaKnown RBP15.38■□□□□ 0.05
SEMA3B-203ENST00000419007 HDCP19113 662 aa15.38■□□□□ 0.05
SEMA3B-203ENST00000419007 SOX4Q06945 474 aaPredicted RBP15.38■□□□□ 0.05
SEMA3B-203ENST00000419007 SLC12A1Q13621 1099 aa15.38■□□□□ 0.05
SEMA3B-203ENST00000419007 MYLK3Q32MK0 819 aa15.38■□□□□ 0.05
SEMA3B-203ENST00000419007 MARCH8Q5T0T0 291 aa15.38■□□□□ 0.05
SEMA3B-203ENST00000419007 IL23RQ5VWK5 629 aa15.38■□□□□ 0.05
SEMA3B-203ENST00000419007 LRRC8EQ6NSJ5 796 aa15.38■□□□□ 0.05
SEMA3B-203ENST00000419007 CYP2R1Q6VVX0 501 aa15.38■□□□□ 0.05
SEMA3B-203ENST00000419007 B3GNT6Q6ZMB0 384 aa15.38■□□□□ 0.05
SEMA3B-203ENST00000419007 ZFP28Q8NHY6 868 aa15.38■□□□□ 0.05
SEMA3B-203ENST00000419007 DNAI2Q9GZS0 605 aa15.38■□□□□ 0.05
SEMA3B-203ENST00000419007 TRPV6Q9H1D0 765 aa15.38■□□□□ 0.05
SEMA3B-203ENST00000419007 RHOJQ9H4E5 214 aa15.38■□□□□ 0.05
SEMA3B-203ENST00000419007 CHST12Q9NRB3 414 aa15.38■□□□□ 0.05
SEMA3B-203ENST00000419007 CENPFP49454 3210 aa15.38■□□□□ 0.05
SEMA3B-203ENST00000419007 A0A0G2JLL6 359 aaPredicted RBP15.38■□□□□ 0.05
SEMA3B-203ENST00000419007 A0A1B0GTW7 788 aa15.38■□□□□ 0.05
SEMA3B-203ENST00000419007 RNASEH2AO75792 299 aaKnown RBP15.38■□□□□ 0.05
SEMA3B-203ENST00000419007 MT-CYBP00156 380 aaPredicted RBP15.38■□□□□ 0.05
SEMA3B-203ENST00000419007 PYGLP06737 847 aa15.38■□□□□ 0.05
SEMA3B-203ENST00000419007 USP17L7P0C7H9 530 aa15.38■□□□□ 0.05
SEMA3B-203ENST00000419007 PIM1P11309 404 aaPredicted RBP15.38■□□□□ 0.05
SEMA3B-203ENST00000419007 NPY2RP49146 381 aa15.38■□□□□ 0.05
SEMA3B-203ENST00000419007 NUMBP49757 651 aa15.38■□□□□ 0.05
SEMA3B-203ENST00000419007 PLK1P53350 603 aa15.38■□□□□ 0.05
SEMA3B-203ENST00000419007 CCNA1P78396 465 aa15.38■□□□□ 0.05
SEMA3B-203ENST00000419007 CDH17Q12864 832 aa15.38■□□□□ 0.05
SEMA3B-203ENST00000419007 RALGDSQ12967 914 aa15.38■□□□□ 0.05
SEMA3B-203ENST00000419007 PDAP1Q13442 181 aaKnown RBP15.38■□□□□ 0.05
SEMA3B-203ENST00000419007 PRRT2Q7Z6L0 340 aaPredicted RBP15.38■□□□□ 0.05
SEMA3B-203ENST00000419007 ADCY4Q8NFM4 1077 aa15.38■□□□□ 0.05
SEMA3B-203ENST00000419007 GPR22Q99680 433 aa15.38■□□□□ 0.05
SEMA3B-203ENST00000419007 ATXN3LQ9H3M9 355 aa15.38■□□□□ 0.05
SEMA3B-203ENST00000419007 DERAQ9Y315 318 aa15.38■□□□□ 0.05
SEMA3B-203ENST00000419007 BRCA1P38398 1863 aaKnown RBP15.38■□□□□ 0.05
SEMA3B-203ENST00000419007 DFFAO00273 331 aa15.37■□□□□ 0.05
SEMA3B-203ENST00000419007 CD4P01730 458 aa15.37■□□□□ 0.05
SEMA3B-203ENST00000419007 PTPN1P18031 435 aaKnown RBP15.37■□□□□ 0.05
SEMA3B-203ENST00000419007 IGFBP6P24592 240 aaPredicted RBP15.37■□□□□ 0.05
SEMA3B-203ENST00000419007 SH3BGRP55822 239 aaPredicted RBP15.37■□□□□ 0.05
SEMA3B-203ENST00000419007 PPIDQ08752 370 aaKnown RBP15.37■□□□□ 0.05
SEMA3B-203ENST00000419007 PRPSAP1Q14558 356 aa15.37■□□□□ 0.05
SEMA3B-203ENST00000419007 WSCD1Q658N2 575 aa15.37■□□□□ 0.05
SEMA3B-203ENST00000419007 ZNF280DQ6N043 979 aa15.37■□□□□ 0.05
SEMA3B-203ENST00000419007 CEP97Q8IW35 865 aa15.37■□□□□ 0.05
SEMA3B-203ENST00000419007 CENPLQ8N0S6 344 aaPredicted RBP15.37■□□□□ 0.05
SEMA3B-203ENST00000419007 LSMEM2Q8N112 164 aa15.37■□□□□ 0.05
SEMA3B-203ENST00000419007 PPTC7Q8NI37 304 aa15.37■□□□□ 0.05
SEMA3B-203ENST00000419007 FAM81AQ8TBF8 368 aa15.37■□□□□ 0.05
SEMA3B-203ENST00000419007 ELMO2Q96JJ3 720 aa15.37■□□□□ 0.05
SEMA3B-203ENST00000419007 SIK2Q9H0K1 926 aa15.37■□□□□ 0.05
SEMA3B-203ENST00000419007 CCDC167Q9P0B6 97 aa15.37■□□□□ 0.05
SEMA3B-203ENST00000419007 ATXN10Q9UBB4 475 aa15.37■□□□□ 0.05
SEMA3B-203ENST00000419007 TIMM13Q9Y5L4 95 aaPredicted RBP15.37■□□□□ 0.05
SEMA3B-203ENST00000419007 PPP2R3BQ9Y5P8 575 aa15.37■□□□□ 0.05
SEMA3B-203ENST00000419007 MAGEB16A2A368 324 aa15.37■□□□□ 0.05
SEMA3B-203ENST00000419007 ASLP04424 464 aa15.37■□□□□ 0.05
SEMA3B-203ENST00000419007 GABRB3P28472 473 aa15.37■□□□□ 0.05
SEMA3B-203ENST00000419007 SEPT6Q14141 434 aa15.37■□□□□ 0.05
SEMA3B-203ENST00000419007 IL31Q6EBC2 164 aa15.37■□□□□ 0.05
SEMA3B-203ENST00000419007 CLEC20AQ6ZU45 233 aa15.37■□□□□ 0.05
SEMA3B-203ENST00000419007 CEP70Q8NHQ1 597 aa15.37■□□□□ 0.05
SEMA3B-203ENST00000419007 PPWD1Q96BP3 646 aaKnown RBP15.37■□□□□ 0.05
SEMA3B-203ENST00000419007 TRPC7Q9HCX4 862 aa15.37■□□□□ 0.05
SEMA3B-203ENST00000419007 VTI1BQ9UEU0 232 aa15.37■□□□□ 0.05
SEMA3B-203ENST00000419007 SNX13Q9Y5W8 968 aa15.37■□□□□ 0.05
SEMA3B-203ENST00000419007 PIRO00625 290 aa15.37■□□□□ 0.05
SEMA3B-203ENST00000419007 AP1G1O43747 822 aa15.37■□□□□ 0.05
SEMA3B-203ENST00000419007 STMN1P16949 149 aa15.37■□□□□ 0.05
SEMA3B-203ENST00000419007 SLC12A2P55011 1212 aa15.37■□□□□ 0.05
SEMA3B-203ENST00000419007 USP46P62068 366 aa15.37■□□□□ 0.05
SEMA3B-203ENST00000419007 FAM219BQ5XKK7 198 aa15.37■□□□□ 0.05
SEMA3B-203ENST00000419007 KCTD11Q693B1 232 aa15.37■□□□□ 0.05
SEMA3B-203ENST00000419007 NAPEPLDQ6IQ20 393 aa15.37■□□□□ 0.05
SEMA3B-203ENST00000419007 TAPT1Q6NXT6 567 aa15.37■□□□□ 0.05
SEMA3B-203ENST00000419007 ZNF410Q86VK4 478 aa15.37■□□□□ 0.05
SEMA3B-203ENST00000419007 TMEM151AQ8N4L1 468 aa15.37■□□□□ 0.05
SEMA3B-203ENST00000419007 STYXQ8WUJ0 223 aa15.37■□□□□ 0.05
SEMA3B-203ENST00000419007 C1QTNF1Q9BXJ1 281 aa15.37■□□□□ 0.05
SEMA3B-203ENST00000419007 MRPS26Q9BYN8 205 aaKnown RBP15.37■□□□□ 0.05
SEMA3B-203ENST00000419007 POMKQ9H5K3 350 aa15.37■□□□□ 0.05
SEMA3B-203ENST00000419007 ZNF408Q9H9D4 720 aa15.37■□□□□ 0.05
SEMA3B-203ENST00000419007 PTTG2Q9NZH5 202 aa15.37■□□□□ 0.05
SEMA3B-203ENST00000419007 OR12D3Q9UGF7 316 aa15.37■□□□□ 0.05
SEMA3B-203ENST00000419007 FAM95CA0A1B0GW59 222 aa15.36■□□□□ 0.05
SEMA3B-203ENST00000419007 TCAF2A6NFQ2 919 aa15.36■□□□□ 0.05
SEMA3B-203ENST00000419007 BCAS2O75934 225 aaPredicted RBP15.36■□□□□ 0.05
SEMA3B-203ENST00000419007 PSMC3P17980 439 aa15.36■□□□□ 0.05
SEMA3B-203ENST00000419007 RPL26P61254 145 aaKnown RBP15.36■□□□□ 0.05
SEMA3B-203ENST00000419007 ESRP1Q6NXG1 681 aaKnown RBP15.36■□□□□ 0.05
SEMA3B-203ENST00000419007 TRIML2Q8N7C3 387 aa15.36■□□□□ 0.05
SEMA3B-203ENST00000419007 PNPLA1Q8N8W4 532 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms