RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 ALADP13716 330 aa17.04■□□□□ 0.32
SSBP3-205ENST00000417664 ADRA1DP25100 572 aa17.04■□□□□ 0.32
SSBP3-205ENST00000417664 ACVRL1P37023 503 aa17.04■□□□□ 0.32
SSBP3-205ENST00000417664 RPS24P62847 133 aaKnown RBP17.04■□□□□ 0.32
SSBP3-205ENST00000417664 ITKQ08881 620 aa17.04■□□□□ 0.32
SSBP3-205ENST00000417664 ZNF235Q14590 738 aa17.04■□□□□ 0.32
SSBP3-205ENST00000417664 SLC1A5Q15758 541 aa17.04■□□□□ 0.32
SSBP3-205ENST00000417664 ANKS4BQ8N8V4 417 aa17.04■□□□□ 0.32
SSBP3-205ENST00000417664 KREMEN2Q8NCW0 462 aa17.04■□□□□ 0.32
SSBP3-205ENST00000417664 SEC16BQ96JE7 1060 aa17.04■□□□□ 0.32
SSBP3-205ENST00000417664 PAIP2Q9BPZ3 127 aaKnown RBP17.04■□□□□ 0.32
SSBP3-205ENST00000417664 UGT1A7Q9HAW7 530 aa17.04■□□□□ 0.32
SSBP3-205ENST00000417664 UGT1A10Q9HAW8 530 aa17.04■□□□□ 0.32
SSBP3-205ENST00000417664 UGT1A8Q9HAW9 530 aa17.04■□□□□ 0.32
SSBP3-205ENST00000417664 CHRAC1Q9NRG0 131 aa17.04■□□□□ 0.32
SSBP3-205ENST00000417664 SEPT3Q9UH03 358 aa17.04■□□□□ 0.32
SSBP3-205ENST00000417664 HMX2A2RU54 273 aa17.03■□□□□ 0.32
SSBP3-205ENST00000417664 GOLGA8RI6L899 631 aa17.03■□□□□ 0.32
SSBP3-205ENST00000417664 FGF19O95750 216 aa17.03■□□□□ 0.32
SSBP3-205ENST00000417664 GLUD1P00367 558 aa17.03■□□□□ 0.32
SSBP3-205ENST00000417664 EPOP01588 193 aa17.03■□□□□ 0.32
SSBP3-205ENST00000417664 RHOCP08134 193 aa17.03■□□□□ 0.32
SSBP3-205ENST00000417664 DHRS4L1P0CG22 281 aa17.03■□□□□ 0.32
SSBP3-205ENST00000417664 ERVK-10P10266 1014 aa17.03■□□□□ 0.32
SSBP3-205ENST00000417664 TPH1P17752 444 aa17.03■□□□□ 0.32
SSBP3-205ENST00000417664 PAMP19021 973 aa17.03■□□□□ 0.32
SSBP3-205ENST00000417664 EN2P19622 333 aaPredicted RBP17.03■□□□□ 0.32
SSBP3-205ENST00000417664 TAC1P20366 129 aa17.03■□□□□ 0.32
SSBP3-205ENST00000417664 CES1P23141 567 aa17.03■□□□□ 0.32
SSBP3-205ENST00000417664 HOXD9P28356 352 aaPredicted RBP17.03■□□□□ 0.32
SSBP3-205ENST00000417664 GABRR2P28476 465 aa17.03■□□□□ 0.32
SSBP3-205ENST00000417664 SPRP35270 261 aaPredicted RBP17.03■□□□□ 0.32
SSBP3-205ENST00000417664 CSE1LP55060 971 aaKnown RBP17.03■□□□□ 0.32
SSBP3-205ENST00000417664 SLC7A9P82251 487 aa17.03■□□□□ 0.32
SSBP3-205ENST00000417664 QPCTQ16769 361 aa17.03■□□□□ 0.32
SSBP3-205ENST00000417664 STXBP5Q5T5C0 1151 aa17.03■□□□□ 0.32
SSBP3-205ENST00000417664 TEDDM1Q5T9Z0 273 aa17.03■□□□□ 0.32
SSBP3-205ENST00000417664 MROH9Q5TGP6 573 aa17.03■□□□□ 0.32
SSBP3-205ENST00000417664 IL31Q6EBC2 164 aa17.03■□□□□ 0.32
SSBP3-205ENST00000417664 KCNMB4Q86W47 210 aa17.03■□□□□ 0.32
SSBP3-205ENST00000417664 FAM217AQ8IXS0 508 aa17.03■□□□□ 0.32
SSBP3-205ENST00000417664 UNC5BQ8IZJ1 945 aa17.03■□□□□ 0.32
SSBP3-205ENST00000417664 MRPL43Q8N983 215 aaKnown RBP17.03■□□□□ 0.32
SSBP3-205ENST00000417664 MFSD3Q96ES6 412 aa17.03■□□□□ 0.32
SSBP3-205ENST00000417664 GCNAQ96QF7 691 aa17.03■□□□□ 0.32
SSBP3-205ENST00000417664 RANBP9Q96S59 729 aa17.03■□□□□ 0.32
SSBP3-205ENST00000417664 TCF25Q9BQ70 676 aa17.03■□□□□ 0.32
SSBP3-205ENST00000417664 TRPC7Q9HCX4 862 aa17.03■□□□□ 0.32
SSBP3-205ENST00000417664 LSM7Q9UK45 103 aaKnown RBP17.03■□□□□ 0.32
SSBP3-205ENST00000417664 TCAF1Q9Y4C2 921 aa17.03■□□□□ 0.32
SSBP3-205ENST00000417664 PLXNA4Q9HCM2 1894 aa17.02■□□□□ 0.32
SSBP3-205ENST00000417664 HEATR9A2RTY3 570 aa17.02■□□□□ 0.32
SSBP3-205ENST00000417664 IRF1P10914 325 aa17.02■□□□□ 0.32
SSBP3-205ENST00000417664 CRHR1P34998 444 aa17.02■□□□□ 0.32
SSBP3-205ENST00000417664 HADHAP40939 763 aa17.02■□□□□ 0.32
SSBP3-205ENST00000417664 CD86P42081 329 aa17.02■□□□□ 0.32
SSBP3-205ENST00000417664 OXCT1P55809 520 aa17.02■□□□□ 0.32
SSBP3-205ENST00000417664 LAMB3Q13751 1172 aa17.02■□□□□ 0.32
SSBP3-205ENST00000417664 CES3Q6UWW8 571 aa17.02■□□□□ 0.32
SSBP3-205ENST00000417664 Q6ZNB5 142 aa17.02■□□□□ 0.32
SSBP3-205ENST00000417664 YTHDF3Q7Z739 585 aaKnown RBP17.02■□□□□ 0.32
SSBP3-205ENST00000417664 TMC8Q8IU68 726 aa17.02■□□□□ 0.32
SSBP3-205ENST00000417664 ARL14EPQ8N8R7 260 aaPredicted RBP17.02■□□□□ 0.32
SSBP3-205ENST00000417664 HJURPQ8NCD3 748 aaPredicted RBP17.02■□□□□ 0.32
SSBP3-205ENST00000417664 CCDC197Q8NCU1 140 aa17.02■□□□□ 0.32
SSBP3-205ENST00000417664 GABPB2Q8TAK5 448 aaPredicted RBP17.02■□□□□ 0.32
SSBP3-205ENST00000417664 ARRDC2Q8TBH0 407 aa17.02■□□□□ 0.32
SSBP3-205ENST00000417664 LRRC8CQ8TDW0 803 aa17.02■□□□□ 0.32
SSBP3-205ENST00000417664 ATP2A3Q93084 1043 aa17.02■□□□□ 0.32
SSBP3-205ENST00000417664 SRPK1Q96SB4 655 aaKnown RBP17.02■□□□□ 0.32
SSBP3-205ENST00000417664 KLF6Q99612 283 aaPredicted RBP17.02■□□□□ 0.32
SSBP3-205ENST00000417664 LRRC3Q9BY71 257 aa17.02■□□□□ 0.32
SSBP3-205ENST00000417664 ACE2Q9BYF1 805 aaPredicted RBP17.02■□□□□ 0.32
SSBP3-205ENST00000417664 C20orf96Q9NUD7 363 aaPredicted RBP17.02■□□□□ 0.32
SSBP3-205ENST00000417664 A0A0D9SEW6 157 aa17.01■□□□□ 0.31
SSBP3-205ENST00000417664 TIMM44O43615 452 aa17.01■□□□□ 0.31
SSBP3-205ENST00000417664 PAPSS2O95340 614 aaPredicted RBP17.01■□□□□ 0.31
SSBP3-205ENST00000417664 MMP2P08253 660 aa17.01■□□□□ 0.31
SSBP3-205ENST00000417664 ITGA2BP08514 1039 aa17.01■□□□□ 0.31
SSBP3-205ENST00000417664 SPATA31D3P0C874 917 aa17.01■□□□□ 0.31
SSBP3-205ENST00000417664 CTNNB1P35222 781 aa17.01■□□□□ 0.31
SSBP3-205ENST00000417664 ETV4P43268 484 aa17.01■□□□□ 0.31
SSBP3-205ENST00000417664 ITIH4Q14624 930 aa17.01■□□□□ 0.31
SSBP3-205ENST00000417664 SPATA31D4Q6ZUB0 917 aa17.01■□□□□ 0.31
SSBP3-205ENST00000417664 GAREM2Q75VX8 874 aa17.01■□□□□ 0.31
SSBP3-205ENST00000417664 NLRP9Q7RTR0 991 aa17.01■□□□□ 0.31
SSBP3-205ENST00000417664 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.01■□□□□ 0.31
SSBP3-205ENST00000417664 ISL2Q96A47 359 aa17.01■□□□□ 0.31
SSBP3-205ENST00000417664 CABS1Q96KC9 395 aa17.01■□□□□ 0.31
SSBP3-205ENST00000417664 PSKH2Q96QS6 385 aa17.01■□□□□ 0.31
SSBP3-205ENST00000417664 MGME1Q9BQP7 344 aa17.01■□□□□ 0.31
SSBP3-205ENST00000417664 PLCD4Q9BRC7 762 aa17.01■□□□□ 0.31
SSBP3-205ENST00000417664 UBA2Q9UBT2 640 aaPredicted RBP17.01■□□□□ 0.31
SSBP3-205ENST00000417664 PLLPQ9Y342 182 aa17.01■□□□□ 0.31
SSBP3-205ENST00000417664 CPQQ9Y646 472 aa17.01■□□□□ 0.31
SSBP3-205ENST00000417664 LOC285095A0A1B0GVY8 99 aa17.01■□□□□ 0.31
SSBP3-205ENST00000417664 C2orf71A6NGG8 1288 aa17.01■□□□□ 0.31
SSBP3-205ENST00000417664 GFRA2O00451 464 aa17.01■□□□□ 0.31
SSBP3-205ENST00000417664 SNX3O60493 162 aa17.01■□□□□ 0.31
SSBP3-205ENST00000417664 GREM1O60565 184 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms