RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 CREG2Q8IUH2 290 aa8.61□□□□□ -1.03
TRIM48-201ENST00000417545 SFTPA1Q8IWL2 248 aa8.61□□□□□ -1.03
TRIM48-201ENST00000417545 CTAGE4Q8IX94 777 aa8.61□□□□□ -1.03
TRIM48-201ENST00000417545 KDM1BQ8NB78 822 aa8.61□□□□□ -1.03
TRIM48-201ENST00000417545 OR8D1Q8WZ84 308 aa8.61□□□□□ -1.03
TRIM48-201ENST00000417545 ERLEC1Q96DZ1 483 aa8.61□□□□□ -1.03
TRIM48-201ENST00000417545 ALG14Q96F25 216 aa8.61□□□□□ -1.03
TRIM48-201ENST00000417545 EXOC2Q96KP1 924 aa8.61□□□□□ -1.03
TRIM48-201ENST00000417545 LMLNQ96KR4 655 aa8.61□□□□□ -1.03
TRIM48-201ENST00000417545 AGAP3Q96P47 875 aa8.61□□□□□ -1.03
TRIM48-201ENST00000417545 OLFM3Q96PB7 478 aa8.61□□□□□ -1.03
TRIM48-201ENST00000417545 TSGA13Q96PP4 275 aa8.61□□□□□ -1.03
TRIM48-201ENST00000417545 VAT1Q99536 393 aa8.61□□□□□ -1.03
TRIM48-201ENST00000417545 TMEM121Q9BTD3 319 aa8.61□□□□□ -1.03
TRIM48-201ENST00000417545 KRTAP3-3Q9BYR6 98 aa8.61□□□□□ -1.03
TRIM48-201ENST00000417545 KRTAP3-2Q9BYR7 98 aa8.61□□□□□ -1.03
TRIM48-201ENST00000417545 CEP41Q9BYV8 373 aa8.61□□□□□ -1.03
TRIM48-201ENST00000417545 OSBPL6Q9BZF3 934 aa8.61□□□□□ -1.03
TRIM48-201ENST00000417545 ZDHHC6Q9H6R6 413 aa8.61□□□□□ -1.03
TRIM48-201ENST00000417545 DYRK4Q9NR20 520 aa8.61□□□□□ -1.03
TRIM48-201ENST00000417545 THAP10Q9P2Z0 257 aaPredicted RBP8.61□□□□□ -1.03
TRIM48-201ENST00000417545 HS3ST2Q9Y278 367 aa8.61□□□□□ -1.03
TRIM48-201ENST00000417545 STARD13Q9Y3M8 1113 aa8.61□□□□□ -1.03
TRIM48-201ENST00000417545 MUC22E2RYF6 1773 aaPredicted RBP8.6□□□□□ -1.03
TRIM48-201ENST00000417545 CXorf51AA0A1B0GTR3 108 aa8.6□□□□□ -1.03
TRIM48-201ENST00000417545 E7EVH7 732 aa8.6□□□□□ -1.03
TRIM48-201ENST00000417545 C1QTNF3-AMACRE9PGA6 284 aa8.6□□□□□ -1.03
TRIM48-201ENST00000417545 K7ERQ8 282 aa8.6□□□□□ -1.03
TRIM48-201ENST00000417545 ZMPSTE24O75844 475 aa8.6□□□□□ -1.03
TRIM48-201ENST00000417545 ALDH1A2O94788 518 aa8.6□□□□□ -1.03
TRIM48-201ENST00000417545 ECEL1O95672 775 aa8.6□□□□□ -1.03
TRIM48-201ENST00000417545 GSRP00390 522 aa8.6□□□□□ -1.03
TRIM48-201ENST00000417545 ITGAVP06756 1048 aa8.6□□□□□ -1.03
TRIM48-201ENST00000417545 ACADMP11310 421 aa8.6□□□□□ -1.03
TRIM48-201ENST00000417545 HNRNPLP14866 589 aaKnown RBP eCLIP8.6□□□□□ -1.03
TRIM48-201ENST00000417545 VAV1P15498 845 aa8.6□□□□□ -1.03
TRIM48-201ENST00000417545 XPAP23025 273 aaPredicted RBP8.6□□□□□ -1.03
TRIM48-201ENST00000417545 PRKCHP24723 683 aa8.6□□□□□ -1.03
TRIM48-201ENST00000417545 STIP1P31948 543 aaKnown RBP8.6□□□□□ -1.03
TRIM48-201ENST00000417545 COILP38432 576 aaPredicted RBP8.6□□□□□ -1.03
TRIM48-201ENST00000417545 IL12RB1P42701 662 aa8.6□□□□□ -1.03
TRIM48-201ENST00000417545 MAPK8P45983 427 aa8.6□□□□□ -1.03
TRIM48-201ENST00000417545 FNTAP49354 379 aa8.6□□□□□ -1.03
TRIM48-201ENST00000417545 SCNN1BP51168 640 aa8.6□□□□□ -1.03
TRIM48-201ENST00000417545 IFI35P80217 286 aaPredicted RBP8.6□□□□□ -1.03
TRIM48-201ENST00000417545 SLC10A7Q0GE19 358 aa8.6□□□□□ -1.03
TRIM48-201ENST00000417545 CCINQ13939 588 aa8.6□□□□□ -1.03
TRIM48-201ENST00000417545 HNRNPA1L2Q32P51 320 aaKnown RBP8.6□□□□□ -1.03
TRIM48-201ENST00000417545 CARD16Q5EG05 197 aa8.6□□□□□ -1.03
TRIM48-201ENST00000417545 ARTNQ5T4W7 220 aa8.6□□□□□ -1.03
TRIM48-201ENST00000417545 FAM71DQ8N9W8 422 aa8.6□□□□□ -1.03
TRIM48-201ENST00000417545 OR2AP1Q8NGE2 309 aa8.6□□□□□ -1.03
TRIM48-201ENST00000417545 ATL2Q8NHH9 583 aa8.6□□□□□ -1.03
TRIM48-201ENST00000417545 SLC35B2Q8TB61 432 aa8.6□□□□□ -1.03
TRIM48-201ENST00000417545 GANCQ8TET4 914 aa8.6□□□□□ -1.03
TRIM48-201ENST00000417545 PDCD6IPQ8WUM4 868 aaKnown RBP8.6□□□□□ -1.03
TRIM48-201ENST00000417545 PBXIP1Q96AQ6 731 aa8.6□□□□□ -1.03
TRIM48-201ENST00000417545 ISG20Q96AZ6 181 aaKnown RBP8.6□□□□□ -1.03
TRIM48-201ENST00000417545 PPP1R2P1Q96PQ5 205 aa8.6□□□□□ -1.03
TRIM48-201ENST00000417545 IER2Q9BTL4 223 aa8.6□□□□□ -1.03
TRIM48-201ENST00000417545 DDX47Q9H0S4 455 aaKnown RBP8.6□□□□□ -1.03
TRIM48-201ENST00000417545 C10orf88Q9H8K7 445 aa8.6□□□□□ -1.03
TRIM48-201ENST00000417545 PDFQ9HBH1 243 aa8.6□□□□□ -1.03
TRIM48-201ENST00000417545 AMACRQ9UHK6 382 aa8.6□□□□□ -1.03
TRIM48-201ENST00000417545 SLCO3A1Q9UIG8 710 aa8.6□□□□□ -1.03
TRIM48-201ENST00000417545 TRHDEQ9UKU6 1024 aa8.6□□□□□ -1.03
TRIM48-201ENST00000417545 MMP17Q9ULZ9 603 aa8.6□□□□□ -1.03
TRIM48-201ENST00000417545 MRFAP1Q9Y605 127 aa8.6□□□□□ -1.03
TRIM48-201ENST00000417545 ACTL7AQ9Y615 435 aa8.6□□□□□ -1.03
TRIM48-201ENST00000417545 COL6A3P12111 3177 aa8.6□□□□□ -1.03
TRIM48-201ENST00000417545 ATG2BQ96BY7 2078 aa8.59□□□□□ -1.03
TRIM48-201ENST00000417545 A0A0A0MRY4 1105 aa8.59□□□□□ -1.03
TRIM48-201ENST00000417545 TARSL2A2RTX5 802 aaKnown RBP8.59□□□□□ -1.03
TRIM48-201ENST00000417545 F5H423 210 aaPredicted RBP8.59□□□□□ -1.03
TRIM48-201ENST00000417545 FANCGO15287 622 aa8.59□□□□□ -1.03
TRIM48-201ENST00000417545 SMAD6O43541 496 aaKnown RBP8.59□□□□□ -1.03
TRIM48-201ENST00000417545 ATP9BO43861 1147 aa8.59□□□□□ -1.03
TRIM48-201ENST00000417545 OPHN1O60890 802 aa8.59□□□□□ -1.03
TRIM48-201ENST00000417545 SIN3BO75182 1162 aa8.59□□□□□ -1.03
TRIM48-201ENST00000417545 MT-CO1P00395 513 aa8.59□□□□□ -1.03
TRIM48-201ENST00000417545 IL1BP01584 269 aa8.59□□□□□ -1.03
TRIM48-201ENST00000417545 KRT14P02533 472 aa8.59□□□□□ -1.03
TRIM48-201ENST00000417545 DNTTP04053 509 aa8.59□□□□□ -1.03
TRIM48-201ENST00000417545 PRNPP04156 253 aa8.59□□□□□ -1.03
TRIM48-201ENST00000417545 HLA-DQB2P05538 268 aa8.59□□□□□ -1.03
TRIM48-201ENST00000417545 DCNP07585 359 aaKnown RBP8.59□□□□□ -1.03
TRIM48-201ENST00000417545 SERPINF2P08697 491 aa8.59□□□□□ -1.03
TRIM48-201ENST00000417545 CHRNB1P11230 501 aa8.59□□□□□ -1.03
TRIM48-201ENST00000417545 CES1P23141 567 aa8.59□□□□□ -1.03
TRIM48-201ENST00000417545 NFKBIAP25963 317 aa8.59□□□□□ -1.03
TRIM48-201ENST00000417545 PTPN3P26045 913 aa8.59□□□□□ -1.03
TRIM48-201ENST00000417545 SERPINA4P29622 427 aa8.59□□□□□ -1.03
TRIM48-201ENST00000417545 KIR2DL1P43626 348 aaPredicted RBP8.59□□□□□ -1.03
TRIM48-201ENST00000417545 KCNJ1P48048 391 aa8.59□□□□□ -1.03
TRIM48-201ENST00000417545 VPS41P49754 854 aa8.59□□□□□ -1.03
TRIM48-201ENST00000417545 CCNHP51946 323 aaPredicted RBP8.59□□□□□ -1.03
TRIM48-201ENST00000417545 MAXP61244 160 aa8.59□□□□□ -1.03
TRIM48-201ENST00000417545 AP1S1P61966 158 aa8.59□□□□□ -1.03
TRIM48-201ENST00000417545 BASP1P80723 227 aaKnown RBP8.59□□□□□ -1.03
TRIM48-201ENST00000417545 DR1Q01658 176 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms