RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 HEATR9A2RTY3 570 aa14.91□□□□□ -0.02
NCKIPSD-204ENST00000416649 PRORSD1PA6NEY8 169 aa14.91□□□□□ -0.02
NCKIPSD-204ENST00000416649 TCAF2A6NFQ2 919 aa14.91□□□□□ -0.02
NCKIPSD-204ENST00000416649 KPNA7A9QM74 516 aa14.91□□□□□ -0.02
NCKIPSD-204ENST00000416649 TMEM233B4DJY2 109 aa14.91□□□□□ -0.02
NCKIPSD-204ENST00000416649 PSMD11O00231 422 aa14.91□□□□□ -0.02
NCKIPSD-204ENST00000416649 TOR1BO14657 336 aa14.91□□□□□ -0.02
NCKIPSD-204ENST00000416649 APOL1O14791 398 aa14.91□□□□□ -0.02
NCKIPSD-204ENST00000416649 SNAP91O60641 907 aa14.91□□□□□ -0.02
NCKIPSD-204ENST00000416649 CLASP2O75122 1294 aaKnown RBP14.91□□□□□ -0.02
NCKIPSD-204ENST00000416649 MYO1DO94832 1006 aa14.91□□□□□ -0.02
NCKIPSD-204ENST00000416649 CAPNS1P04632 268 aa14.91□□□□□ -0.02
NCKIPSD-204ENST00000416649 RPL14P50914 215 aaKnown RBP14.91□□□□□ -0.02
NCKIPSD-204ENST00000416649 RAD23AP54725 363 aa14.91□□□□□ -0.02
NCKIPSD-204ENST00000416649 NAGLUP54802 743 aa14.91□□□□□ -0.02
NCKIPSD-204ENST00000416649 MTERF2Q49AM1 385 aa14.91□□□□□ -0.02
NCKIPSD-204ENST00000416649 SMUG1Q53HV7 270 aa14.91□□□□□ -0.02
NCKIPSD-204ENST00000416649 MAMDC4Q6UXC1 1216 aa14.91□□□□□ -0.02
NCKIPSD-204ENST00000416649 TAS1R3Q7RTX0 852 aa14.91□□□□□ -0.02
NCKIPSD-204ENST00000416649 RNF157Q96PX1 679 aa14.91□□□□□ -0.02
NCKIPSD-204ENST00000416649 ZBTB26Q9HCK0 441 aa14.91□□□□□ -0.02
NCKIPSD-204ENST00000416649 WARS2Q9UGM6 360 aaKnown RBP14.91□□□□□ -0.02
NCKIPSD-204ENST00000416649 FAM47E-STBD1D6RA91 191 aa14.9□□□□□ -0.02
NCKIPSD-204ENST00000416649 H0YJX3 145 aa14.9□□□□□ -0.02
NCKIPSD-204ENST00000416649 B4GAT1O43505 415 aa14.9□□□□□ -0.02
NCKIPSD-204ENST00000416649 IDUAP35475 653 aa14.9□□□□□ -0.02
NCKIPSD-204ENST00000416649 OPRL1P41146 370 aa14.9□□□□□ -0.02
NCKIPSD-204ENST00000416649 NME5P56597 212 aa14.9□□□□□ -0.02
NCKIPSD-204ENST00000416649 SP2Q02086 613 aa14.9□□□□□ -0.02
NCKIPSD-204ENST00000416649 MERTKQ12866 999 aa14.9□□□□□ -0.02
NCKIPSD-204ENST00000416649 TAZQ16635 292 aa14.9□□□□□ -0.02
NCKIPSD-204ENST00000416649 DGKDQ16760 1214 aa14.9□□□□□ -0.02
NCKIPSD-204ENST00000416649 CCNYL1Q8N7R7 359 aa14.9□□□□□ -0.02
NCKIPSD-204ENST00000416649 REPS2Q8NFH8 660 aa14.9□□□□□ -0.02
NCKIPSD-204ENST00000416649 CXorf38Q8TB03 319 aa14.9□□□□□ -0.02
NCKIPSD-204ENST00000416649 SLC7A3Q8WY07 619 aa14.9□□□□□ -0.02
NCKIPSD-204ENST00000416649 SCYL1Q96KG9 808 aa14.9□□□□□ -0.02
NCKIPSD-204ENST00000416649 TSPAN18Q96SJ8 248 aa14.9□□□□□ -0.02
NCKIPSD-204ENST00000416649 ADPGKQ9BRR6 497 aa14.9□□□□□ -0.02
NCKIPSD-204ENST00000416649 TARS2Q9BW92 718 aaKnown RBP14.9□□□□□ -0.02
NCKIPSD-204ENST00000416649 ACAD9Q9H845 621 aa14.9□□□□□ -0.02
NCKIPSD-204ENST00000416649 VTA1Q9NP79 307 aa14.9□□□□□ -0.02
NCKIPSD-204ENST00000416649 RIC8BQ9NVN3 520 aa14.9□□□□□ -0.02
NCKIPSD-204ENST00000416649 CCDC167Q9P0B6 97 aa14.9□□□□□ -0.02
NCKIPSD-204ENST00000416649 ZDHHC2Q9UIJ5 367 aa14.9□□□□□ -0.02
NCKIPSD-204ENST00000416649 A0A096LPK6 155 aa14.9□□□□□ -0.02
NCKIPSD-204ENST00000416649 TK2O00142 265 aa14.9□□□□□ -0.02
NCKIPSD-204ENST00000416649 RAP1GAPP47736 663 aa14.9□□□□□ -0.02
NCKIPSD-204ENST00000416649 NEK2P51955 445 aa14.9□□□□□ -0.02
NCKIPSD-204ENST00000416649 TIGD2Q4W5G0 525 aa14.9□□□□□ -0.02
NCKIPSD-204ENST00000416649 RNF19BQ6ZMZ0 732 aa14.9□□□□□ -0.02
NCKIPSD-204ENST00000416649 PIWIL3Q7Z3Z3 882 aaKnown RBP14.9□□□□□ -0.02
NCKIPSD-204ENST00000416649 VSIG10LQ86VR7 867 aa14.9□□□□□ -0.02
NCKIPSD-204ENST00000416649 NSUN6Q8TEA1 469 aaKnown RBP14.9□□□□□ -0.02
NCKIPSD-204ENST00000416649 CLIP3Q96DZ5 547 aa14.9□□□□□ -0.02
NCKIPSD-204ENST00000416649 TCF12Q99081 682 aa14.9□□□□□ -0.02
NCKIPSD-204ENST00000416649 MTMR12Q9C0I1 747 aa14.9□□□□□ -0.02
NCKIPSD-204ENST00000416649 UPF3AQ9H1J1 476 aaKnown RBP14.9□□□□□ -0.02
NCKIPSD-204ENST00000416649 IL1RL2Q9HB29 575 aa14.9□□□□□ -0.02
NCKIPSD-204ENST00000416649 FANCEQ9HB96 536 aa14.9□□□□□ -0.02
NCKIPSD-204ENST00000416649 SCHIP1Q9P0W5 487 aaPredicted RBP14.9□□□□□ -0.02
NCKIPSD-204ENST00000416649 LRRIQ4A6NIV6 560 aa14.89□□□□□ -0.03
NCKIPSD-204ENST00000416649 C19orf81C9J6K1 198 aa14.89□□□□□ -0.03
NCKIPSD-204ENST00000416649 GPR25O00155 361 aa14.89□□□□□ -0.03
NCKIPSD-204ENST00000416649 CLPXO76031 633 aa14.89□□□□□ -0.03
NCKIPSD-204ENST00000416649 CCND2P30279 289 aa14.89□□□□□ -0.03
NCKIPSD-204ENST00000416649 SLC7A1P30825 629 aa14.89□□□□□ -0.03
NCKIPSD-204ENST00000416649 GARSP41250 739 aaKnown RBP14.89□□□□□ -0.03
NCKIPSD-204ENST00000416649 GRIA4P48058 902 aa14.89□□□□□ -0.03
NCKIPSD-204ENST00000416649 TBCELQ5QJ74 424 aa14.89□□□□□ -0.03
NCKIPSD-204ENST00000416649 C4orf19Q8IY42 314 aa14.89□□□□□ -0.03
NCKIPSD-204ENST00000416649 HGH1Q9BTY7 390 aa14.89□□□□□ -0.03
NCKIPSD-204ENST00000416649 CEP44Q9C0F1 390 aa14.89□□□□□ -0.03
NCKIPSD-204ENST00000416649 DOCK5Q9H7D0 1870 aa14.89□□□□□ -0.03
NCKIPSD-204ENST00000416649 POLE4Q9NR33 117 aa14.89□□□□□ -0.03
NCKIPSD-204ENST00000416649 HOXC10Q9NYD6 342 aa14.89□□□□□ -0.03
NCKIPSD-204ENST00000416649 SEPT9Q9UHD8 586 aaPredicted RBP14.89□□□□□ -0.03
NCKIPSD-204ENST00000416649 PCDHGA7Q9Y5G6 932 aa14.89□□□□□ -0.03
NCKIPSD-204ENST00000416649 TTKP33981 857 aa14.89□□□□□ -0.03
NCKIPSD-204ENST00000416649 ADAM17P78536 824 aa14.89□□□□□ -0.03
NCKIPSD-204ENST00000416649 PPP4R4Q6NUP7 873 aa14.89□□□□□ -0.03
NCKIPSD-204ENST00000416649 VASH1Q7L8A9 365 aaPredicted RBP14.89□□□□□ -0.03
NCKIPSD-204ENST00000416649 DSG4Q86SJ6 1040 aa14.89□□□□□ -0.03
NCKIPSD-204ENST00000416649 ALPK1Q96QP1 1244 aa14.89□□□□□ -0.03
NCKIPSD-204ENST00000416649 OLFM1Q99784 485 aa14.89□□□□□ -0.03
NCKIPSD-204ENST00000416649 HAPLN2Q9GZV7 340 aa14.89□□□□□ -0.03
NCKIPSD-204ENST00000416649 POLR3FQ9H1D9 316 aaPredicted RBP14.89□□□□□ -0.03
NCKIPSD-204ENST00000416649 SMARCAD1Q9H4L7 1026 aa14.89□□□□□ -0.03
NCKIPSD-204ENST00000416649 PALMDQ9NP74 551 aa14.89□□□□□ -0.03
NCKIPSD-204ENST00000416649 ASNSD1Q9NWL6 643 aa14.89□□□□□ -0.03
NCKIPSD-204ENST00000416649 IPO11Q9UI26 975 aaKnown RBP14.89□□□□□ -0.03
NCKIPSD-204ENST00000416649 COL11A1P12107 1806 aaPredicted RBP14.89□□□□□ -0.03
NCKIPSD-204ENST00000416649 G3V2L1 256 aa14.89□□□□□ -0.03
NCKIPSD-204ENST00000416649 MT-CO1P00395 513 aa14.89□□□□□ -0.03
NCKIPSD-204ENST00000416649 PDGFRAP16234 1089 aa14.89□□□□□ -0.03
NCKIPSD-204ENST00000416649 ZNF132P52740 706 aa14.89□□□□□ -0.03
NCKIPSD-204ENST00000416649 ARPC4P59998 168 aa14.89□□□□□ -0.03
NCKIPSD-204ENST00000416649 KCNC4Q03721 635 aa14.89□□□□□ -0.03
NCKIPSD-204ENST00000416649 MAP1SQ66K74 1059 aaPredicted RBP14.89□□□□□ -0.03
NCKIPSD-204ENST00000416649 BEGAINQ9BUH8 593 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms