RNA–Protein interactions for RNA: ENST00000415886.2

CTHRC1-202, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 2 BASIC

Gene CTHRC1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-202ENST00000415886 DAB1O75553 588 aa13.53□□□□□ -0.24
CTHRC1-202ENST00000415886 CTSLP07711 333 aa13.53□□□□□ -0.24
CTHRC1-202ENST00000415886 ALPPL2P10696 532 aa13.53□□□□□ -0.24
CTHRC1-202ENST00000415886 CDH5P33151 784 aaPredicted RBP13.53□□□□□ -0.24
CTHRC1-202ENST00000415886 GABRB2P47870 512 aa13.53□□□□□ -0.24
CTHRC1-202ENST00000415886 SULT1E1P49888 294 aa13.53□□□□□ -0.24
CTHRC1-202ENST00000415886 VASPP50552 380 aaPredicted RBP13.53□□□□□ -0.24
CTHRC1-202ENST00000415886 CLDN2P57739 230 aa13.53□□□□□ -0.24
CTHRC1-202ENST00000415886 DEUP1Q05D60 604 aa13.53□□□□□ -0.24
CTHRC1-202ENST00000415886 VAC14Q08AM6 782 aa13.53□□□□□ -0.24
CTHRC1-202ENST00000415886 DLG2Q15700 870 aa13.53□□□□□ -0.24
CTHRC1-202ENST00000415886 ZNF284Q2VY69 593 aa13.53□□□□□ -0.24
CTHRC1-202ENST00000415886 ZNF542PQ5EBM4 170 aa13.53□□□□□ -0.24
CTHRC1-202ENST00000415886 C3orf38Q5JPI3 329 aa13.53□□□□□ -0.24
CTHRC1-202ENST00000415886 NAA35Q5VZE5 725 aa13.53□□□□□ -0.24
CTHRC1-202ENST00000415886 TRIM72Q6ZMU5 477 aa13.53□□□□□ -0.24
CTHRC1-202ENST00000415886 GCNT7Q6ZNI0 430 aa13.53□□□□□ -0.24
CTHRC1-202ENST00000415886 SLC22A18ASQ8N1D0 253 aa13.53□□□□□ -0.24
CTHRC1-202ENST00000415886 ZNF397Q8NF99 534 aaPredicted RBP13.53□□□□□ -0.24
CTHRC1-202ENST00000415886 BPIFA3Q9BQP9 254 aa13.53□□□□□ -0.24
CTHRC1-202ENST00000415886 SIK2Q9H0K1 926 aa13.53□□□□□ -0.24
CTHRC1-202ENST00000415886 NLGN3Q9NZ94 848 aa13.53□□□□□ -0.24
CTHRC1-202ENST00000415886 SATB2Q9UPW6 733 aa13.53□□□□□ -0.24
CTHRC1-202ENST00000415886 ZNF462Q96JM2 2506 aa13.52□□□□□ -0.24
CTHRC1-202ENST00000415886 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.52□□□□□ -0.25
CTHRC1-202ENST00000415886 A0A1W2PNU3 283 aaPredicted RBP13.52□□□□□ -0.25
CTHRC1-202ENST00000415886 RNF103O00237 685 aa13.52□□□□□ -0.25
CTHRC1-202ENST00000415886 NEBLO76041 1014 aa13.52□□□□□ -0.25
CTHRC1-202ENST00000415886 SERPINC1P01008 464 aa13.52□□□□□ -0.25
CTHRC1-202ENST00000415886 GP1BAP07359 652 aa13.52□□□□□ -0.25
CTHRC1-202ENST00000415886 C6P13671 934 aa13.52□□□□□ -0.25
CTHRC1-202ENST00000415886 AKT2P31751 481 aa13.52□□□□□ -0.25
CTHRC1-202ENST00000415886 SCNN1AP37088 669 aa13.52□□□□□ -0.25
CTHRC1-202ENST00000415886 NSFP46459 744 aaKnown RBP13.52□□□□□ -0.25
CTHRC1-202ENST00000415886 ZNF177Q13360 481 aaPredicted RBP13.52□□□□□ -0.25
CTHRC1-202ENST00000415886 EIF4EBP2Q13542 120 aaPredicted RBP13.52□□□□□ -0.25
CTHRC1-202ENST00000415886 NCAPHQ15003 741 aa13.52□□□□□ -0.25
CTHRC1-202ENST00000415886 TTC39BQ5VTQ0 682 aaPredicted RBP13.52□□□□□ -0.25
CTHRC1-202ENST00000415886 FBXL22Q6P050 247 aa13.52□□□□□ -0.25
CTHRC1-202ENST00000415886 LRRC31Q6UY01 552 aa13.52□□□□□ -0.25
CTHRC1-202ENST00000415886 HORMAD1Q86X24 394 aa13.52□□□□□ -0.25
CTHRC1-202ENST00000415886 SH2D3CQ8N5H7 860 aa13.52□□□□□ -0.25
CTHRC1-202ENST00000415886 IFI44Q8TCB0 444 aa13.52□□□□□ -0.25
CTHRC1-202ENST00000415886 MAPK15Q8TD08 544 aa13.52□□□□□ -0.25
CTHRC1-202ENST00000415886 EPS8L1Q8TE68 723 aa13.52□□□□□ -0.25
CTHRC1-202ENST00000415886 SNRNP27Q8WVK2 155 aaKnown RBP13.52□□□□□ -0.25
CTHRC1-202ENST00000415886 ARRDC3Q96B67 414 aa13.52□□□□□ -0.25
CTHRC1-202ENST00000415886 RPRD1AQ96P16 312 aaPredicted RBP13.52□□□□□ -0.25
CTHRC1-202ENST00000415886 ERGIC2Q96RQ1 377 aa13.52□□□□□ -0.25
CTHRC1-202ENST00000415886 FEM1AQ9BSK4 669 aa13.52□□□□□ -0.25
CTHRC1-202ENST00000415886 DPH1Q9BZG8 443 aa13.52□□□□□ -0.25
CTHRC1-202ENST00000415886 ABCG4Q9H172 646 aa13.52□□□□□ -0.25
CTHRC1-202ENST00000415886 CLMPQ9H6B4 373 aa13.52□□□□□ -0.25
CTHRC1-202ENST00000415886 THSD1Q9NS62 852 aa13.52□□□□□ -0.25
CTHRC1-202ENST00000415886 DNAJC28Q9NX36 388 aa13.52□□□□□ -0.25
CTHRC1-202ENST00000415886 ZFR2Q9UPR6 939 aaKnown RBP13.52□□□□□ -0.25
CTHRC1-202ENST00000415886 SIK3Q9Y2K2 1263 aa13.52□□□□□ -0.25
CTHRC1-202ENST00000415886 COL27A1Q8IZC6 1860 aaPredicted RBP13.52□□□□□ -0.25
CTHRC1-202ENST00000415886 K7ESM1 405 aa13.51□□□□□ -0.25
CTHRC1-202ENST00000415886 KPNA3O00505 521 aaPredicted RBP13.51□□□□□ -0.25
CTHRC1-202ENST00000415886 PAGE1O75459 146 aa13.51□□□□□ -0.25
CTHRC1-202ENST00000415886 TGM2P21980 687 aa13.51□□□□□ -0.25
CTHRC1-202ENST00000415886 HNRNPA2B1P22626 353 aaKnown RBP13.51□□□□□ -0.25
CTHRC1-202ENST00000415886 GGCXP38435 758 aa13.51□□□□□ -0.25
CTHRC1-202ENST00000415886 ISXQ2M1V0 245 aa13.51□□□□□ -0.25
CTHRC1-202ENST00000415886 SLC25A52Q3SY17 297 aa13.51□□□□□ -0.25
CTHRC1-202ENST00000415886 C2CD6Q53TS8 623 aa13.51□□□□□ -0.25
CTHRC1-202ENST00000415886 BRMS1LQ5PSV4 323 aa13.51□□□□□ -0.25
CTHRC1-202ENST00000415886 ACBD5Q5T8D3 534 aaPredicted RBP13.51□□□□□ -0.25
CTHRC1-202ENST00000415886 KIAA1614Q5VZ46 1190 aa13.51□□□□□ -0.25
CTHRC1-202ENST00000415886 SEL1L3Q68CR1 1132 aa13.51□□□□□ -0.25
CTHRC1-202ENST00000415886 PTAR1Q7Z6K3 402 aaPredicted RBP13.51□□□□□ -0.25
CTHRC1-202ENST00000415886 XYLT1Q86Y38 959 aa13.51□□□□□ -0.25
CTHRC1-202ENST00000415886 SLC20A1Q8WUM9 679 aa13.51□□□□□ -0.25
CTHRC1-202ENST00000415886 NPY6RQ99463 290 aa13.51□□□□□ -0.25
CTHRC1-202ENST00000415886 TKTL2Q9H0I9 626 aa13.51□□□□□ -0.25
CTHRC1-202ENST00000415886 VPS28Q9UK41 221 aa13.51□□□□□ -0.25
CTHRC1-202ENST00000415886 VANGL2Q9ULK5 521 aa13.51□□□□□ -0.25
CTHRC1-202ENST00000415886 OR51B4Q9Y5P0 310 aa13.51□□□□□ -0.25
CTHRC1-202ENST00000415886 PMS2P1A4D2B8 440 aa13.5□□□□□ -0.25
CTHRC1-202ENST00000415886 ANKRD62A6NC57 917 aa13.5□□□□□ -0.25
CTHRC1-202ENST00000415886 GOLGA6L19H0YKK7 550 aa13.5□□□□□ -0.25
CTHRC1-202ENST00000415886 K7ERQ8 282 aa13.5□□□□□ -0.25
CTHRC1-202ENST00000415886 SCAMP1O15126 338 aa13.5□□□□□ -0.25
CTHRC1-202ENST00000415886 SLC28A2O43868 658 aa13.5□□□□□ -0.25
CTHRC1-202ENST00000415886 LZTS3O60299 673 aaPredicted RBP13.5□□□□□ -0.25
CTHRC1-202ENST00000415886 PCDH8O95206 1070 aa13.5□□□□□ -0.25
CTHRC1-202ENST00000415886 MT-CO1P00395 513 aa13.5□□□□□ -0.25
CTHRC1-202ENST00000415886 CYP1A1P04798 512 aaPredicted RBP13.5□□□□□ -0.25
CTHRC1-202ENST00000415886 SRCP12931 536 aa13.5□□□□□ -0.25
CTHRC1-202ENST00000415886 ATP1A3P13637 1013 aa13.5□□□□□ -0.25
CTHRC1-202ENST00000415886 FERP16591 822 aa13.5□□□□□ -0.25
CTHRC1-202ENST00000415886 TNFAIP3P21580 790 aa13.5□□□□□ -0.25
CTHRC1-202ENST00000415886 CHRNA3P32297 505 aa13.5□□□□□ -0.25
CTHRC1-202ENST00000415886 DUSP3P51452 185 aaPredicted RBP13.5□□□□□ -0.25
CTHRC1-202ENST00000415886 JAM2P57087 298 aa13.5□□□□□ -0.25
CTHRC1-202ENST00000415886 NOMO3P69849 1222 aa13.5□□□□□ -0.25
CTHRC1-202ENST00000415886 AUHQ13825 339 aaKnown RBP13.5□□□□□ -0.25
CTHRC1-202ENST00000415886 CDKN3Q16667 212 aa13.5□□□□□ -0.25
CTHRC1-202ENST00000415886 KLHL40Q2TBA0 621 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms