RNA–Protein interactions for RNA: ENST00000415691.2

HNF4A-204, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 2,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-204ENST00000415691 SCINQ9Y6U3 715 aa13.47□□□□□ -0.25
HNF4A-204ENST00000415691 CDH23Q9H251 3354 aa13.47□□□□□ -0.25
HNF4A-204ENST00000415691 ARHGEF37A1IGU5 675 aa13.46□□□□□ -0.25
HNF4A-204ENST00000415691 MEI4A8MW99 385 aa13.46□□□□□ -0.25
HNF4A-204ENST00000415691 H3BSA7 217 aa13.46□□□□□ -0.25
HNF4A-204ENST00000415691 ZNF701M0R085 212 aaPredicted RBP13.46□□□□□ -0.25
HNF4A-204ENST00000415691 TBC1D4O60343 1298 aa13.46□□□□□ -0.25
HNF4A-204ENST00000415691 ATP6V1B1P15313 513 aa13.46□□□□□ -0.25
HNF4A-204ENST00000415691 ALOX15P16050 662 aaPredicted RBP13.46□□□□□ -0.25
HNF4A-204ENST00000415691 ZNF12P17014 697 aa13.46□□□□□ -0.25
HNF4A-204ENST00000415691 PCSK1P29120 753 aa13.46□□□□□ -0.25
HNF4A-204ENST00000415691 PPM1AP35813 382 aa13.46□□□□□ -0.25
HNF4A-204ENST00000415691 ERVFC1P60507 584 aa13.46□□□□□ -0.25
HNF4A-204ENST00000415691 MLLT1Q03111 559 aaPredicted RBP13.46□□□□□ -0.25
HNF4A-204ENST00000415691 UBAP2LQ14157 1087 aaKnown RBP13.46□□□□□ -0.25
HNF4A-204ENST00000415691 BCL2A1Q16548 175 aa13.46□□□□□ -0.25
HNF4A-204ENST00000415691 GOLGA7BQ2TAP0 167 aa13.46□□□□□ -0.25
HNF4A-204ENST00000415691 MSS51Q4VC12 460 aa13.46□□□□□ -0.25
HNF4A-204ENST00000415691 INTS6LQ5JSJ4 861 aaKnown RBP13.46□□□□□ -0.25
HNF4A-204ENST00000415691 FNBP1LQ5T0N5 605 aa13.46□□□□□ -0.25
HNF4A-204ENST00000415691 TTC39BQ5VTQ0 682 aaPredicted RBP13.46□□□□□ -0.25
HNF4A-204ENST00000415691 FAM171BQ6P995 826 aa13.46□□□□□ -0.25
HNF4A-204ENST00000415691 PDIK1LQ8N165 341 aa13.46□□□□□ -0.25
HNF4A-204ENST00000415691 SLC35B2Q8TB61 432 aa13.46□□□□□ -0.25
HNF4A-204ENST00000415691 CPT1BQ92523 772 aa13.46□□□□□ -0.25
HNF4A-204ENST00000415691 CMTM5Q96DZ9 223 aa13.46□□□□□ -0.25
HNF4A-204ENST00000415691 SGF29Q96ES7 293 aa13.46□□□□□ -0.25
HNF4A-204ENST00000415691 CCDC97Q96F63 343 aaPredicted RBP13.46□□□□□ -0.25
HNF4A-204ENST00000415691 PCED1BQ96HM7 432 aa13.46□□□□□ -0.25
HNF4A-204ENST00000415691 PNPLA8Q9NP80 782 aa13.46□□□□□ -0.25
HNF4A-204ENST00000415691 RRN3Q9NYV6 651 aa13.46□□□□□ -0.25
HNF4A-204ENST00000415691 CYTH4Q9UIA0 394 aa13.46□□□□□ -0.25
HNF4A-204ENST00000415691 CNOT11Q9UKZ1 510 aaKnown RBP13.46□□□□□ -0.25
HNF4A-204ENST00000415691 KIAA1257Q9ULG3 409 aa13.46□□□□□ -0.25
HNF4A-204ENST00000415691 VWA8A3KMH1 1905 aa13.46□□□□□ -0.25
HNF4A-204ENST00000415691 KIAA1671Q9BY89 1806 aa13.46□□□□□ -0.25
HNF4A-204ENST00000415691 NSFP46459 744 aaKnown RBP13.46□□□□□ -0.26
HNF4A-204ENST00000415691 SLC39A12Q504Y0 691 aa13.46□□□□□ -0.26
HNF4A-204ENST00000415691 C2CD6Q53TS8 623 aa13.46□□□□□ -0.26
HNF4A-204ENST00000415691 TTC30AQ86WT1 665 aa13.46□□□□□ -0.26
HNF4A-204ENST00000415691 WDR75Q8IWA0 830 aaKnown RBP13.46□□□□□ -0.26
HNF4A-204ENST00000415691 SPATA18Q8TC71 538 aa13.46□□□□□ -0.26
HNF4A-204ENST00000415691 SPPL3Q8TCT6 385 aa13.46□□□□□ -0.26
HNF4A-204ENST00000415691 PRO3102Q9H379 93 aa13.46□□□□□ -0.26
HNF4A-204ENST00000415691 THAP1Q9NVV9 213 aa13.46□□□□□ -0.26
HNF4A-204ENST00000415691 SUN2Q9UH99 717 aa13.46□□□□□ -0.26
HNF4A-204ENST00000415691 H0YJX3 145 aa13.45□□□□□ -0.26
HNF4A-204ENST00000415691 GRM6O15303 877 aa13.45□□□□□ -0.26
HNF4A-204ENST00000415691 BANF1O75531 89 aa13.45□□□□□ -0.26
HNF4A-204ENST00000415691 BEST1O76090 585 aa13.45□□□□□ -0.26
HNF4A-204ENST00000415691 PPARGP37231 505 aaPredicted RBP13.45□□□□□ -0.26
HNF4A-204ENST00000415691 HALP42357 657 aa13.45□□□□□ -0.26
HNF4A-204ENST00000415691 EPHB1P54762 984 aa13.45□□□□□ -0.26
HNF4A-204ENST00000415691 CHI3L2Q15782 390 aa13.45□□□□□ -0.26
HNF4A-204ENST00000415691 RALGPS1Q5JS13 557 aa13.45□□□□□ -0.26
HNF4A-204ENST00000415691 ARHGAP17Q68EM7 881 aa13.45□□□□□ -0.26
HNF4A-204ENST00000415691 PLEKHA7Q6IQ23 1121 aa13.45□□□□□ -0.26
HNF4A-204ENST00000415691 LCLAT1Q6UWP7 414 aa13.45□□□□□ -0.26
HNF4A-204ENST00000415691 TRIM72Q6ZMU5 477 aa13.45□□□□□ -0.26
HNF4A-204ENST00000415691 ANKS3Q6ZW76 656 aa13.45□□□□□ -0.26
HNF4A-204ENST00000415691 SLC26A11Q86WA9 606 aa13.45□□□□□ -0.26
HNF4A-204ENST00000415691 RIN3Q8TB24 985 aa13.45□□□□□ -0.26
HNF4A-204ENST00000415691 SHKBP1Q8TBC3 707 aa13.45□□□□□ -0.26
HNF4A-204ENST00000415691 MYLPFQ96A32 169 aa13.45□□□□□ -0.26
HNF4A-204ENST00000415691 PGLYRP2Q96PD5 576 aa13.45□□□□□ -0.26
HNF4A-204ENST00000415691 CLSTN3Q9BQT9 956 aa13.45□□□□□ -0.26
HNF4A-204ENST00000415691 MED10Q9BTT4 135 aa13.45□□□□□ -0.26
HNF4A-204ENST00000415691 HERC2P3Q9BVR0 1158 aa13.45□□□□□ -0.26
HNF4A-204ENST00000415691 ZNF518BQ9C0D4 1074 aa13.45□□□□□ -0.26
HNF4A-204ENST00000415691 TMEM30AQ9NV96 361 aa13.45□□□□□ -0.26
HNF4A-204ENST00000415691 IGSF9Q9P2J2 1179 aa13.45□□□□□ -0.26
HNF4A-204ENST00000415691 PCDHGC3Q9UN70 934 aa13.45□□□□□ -0.26
HNF4A-204ENST00000415691 EFR3BQ9Y2G0 817 aa13.45□□□□□ -0.26
HNF4A-204ENST00000415691 TDRKHQ9Y2W6 561 aaKnown RBP13.45□□□□□ -0.26
HNF4A-204ENST00000415691 CDY1Q9Y6F8 540 aa13.45□□□□□ -0.26
HNF4A-204ENST00000415691 TSC2P49815 1807 aa13.45□□□□□ -0.26
HNF4A-204ENST00000415691 M0QYV0 167 aa13.45□□□□□ -0.26
HNF4A-204ENST00000415691 MED7O43513 233 aa13.45□□□□□ -0.26
HNF4A-204ENST00000415691 OR1D2P34982 312 aa13.45□□□□□ -0.26
HNF4A-204ENST00000415691 GLUD2P49448 558 aa13.45□□□□□ -0.26
HNF4A-204ENST00000415691 TUBA4AP68366 448 aa13.45□□□□□ -0.26
HNF4A-204ENST00000415691 ADGRE1Q14246 886 aa13.45□□□□□ -0.26
HNF4A-204ENST00000415691 PSMD5Q16401 504 aa13.45□□□□□ -0.26
HNF4A-204ENST00000415691 ZNF280DQ6N043 979 aa13.45□□□□□ -0.26
HNF4A-204ENST00000415691 TMEM53Q6P2H8 277 aa13.45□□□□□ -0.26
HNF4A-204ENST00000415691 TMEM110Q86TL2 294 aa13.45□□□□□ -0.26
HNF4A-204ENST00000415691 NUDCD3Q8IVD9 361 aa13.45□□□□□ -0.26
HNF4A-204ENST00000415691 FBXO22Q8NEZ5 403 aa13.45□□□□□ -0.26
HNF4A-204ENST00000415691 GIPC3Q8TF64 312 aa13.45□□□□□ -0.26
HNF4A-204ENST00000415691 POF1BQ8WVV4 589 aa13.45□□□□□ -0.26
HNF4A-204ENST00000415691 MSRAQ9UJ68 235 aa13.45□□□□□ -0.26
HNF4A-204ENST00000415691 TMEM98Q9Y2Y6 226 aa13.45□□□□□ -0.26
HNF4A-204ENST00000415691 H7C4K7 107 aa13.44□□□□□ -0.26
HNF4A-204ENST00000415691 SGK1O00141 431 aa13.44□□□□□ -0.26
HNF4A-204ENST00000415691 KRT37O76014 449 aa13.44□□□□□ -0.26
HNF4A-204ENST00000415691 FBXO21O94952 628 aa13.44□□□□□ -0.26
HNF4A-204ENST00000415691 PROCP04070 461 aa13.44□□□□□ -0.26
HNF4A-204ENST00000415691 SNRPAP09012 282 aaKnown RBP13.44□□□□□ -0.26
HNF4A-204ENST00000415691 ITGAXP20702 1163 aa13.44□□□□□ -0.26
HNF4A-204ENST00000415691 CA8P35219 290 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms