RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 CCDC110Q8TBZ0 833 aa13.5□□□□□ -0.25
CNN3-203ENST00000415017 SORCS1Q8WY21 1168 aa13.5□□□□□ -0.25
CNN3-203ENST00000415017 SPOCK2Q92563 424 aa13.5□□□□□ -0.25
CNN3-203ENST00000415017 IMP4Q96G21 291 aaKnown RBP13.5□□□□□ -0.25
CNN3-203ENST00000415017 RPL10LQ96L21 214 aaKnown RBP13.5□□□□□ -0.25
CNN3-203ENST00000415017 FCRL5Q96RD9 977 aa13.5□□□□□ -0.25
CNN3-203ENST00000415017 FERMT1Q9BQL6 677 aa13.5□□□□□ -0.25
CNN3-203ENST00000415017 SLC25A51Q9H1U9 297 aa13.5□□□□□ -0.25
CNN3-203ENST00000415017 GLOD4Q9HC38 313 aa13.5□□□□□ -0.25
CNN3-203ENST00000415017 CD248Q9HCU0 757 aa13.5□□□□□ -0.25
CNN3-203ENST00000415017 ARHGEF3Q9NR81 526 aa13.5□□□□□ -0.25
CNN3-203ENST00000415017 SLC25A13Q9UJS0 675 aa13.5□□□□□ -0.25
CNN3-203ENST00000415017 MUC3AQ02505 3323 aa13.5□□□□□ -0.25
CNN3-203ENST00000415017 EFCAB8A8MWE9 144 aa13.49□□□□□ -0.25
CNN3-203ENST00000415017 WASH3PC4AMC7 463 aa13.49□□□□□ -0.25
CNN3-203ENST00000415017 SGK1O00141 431 aa13.49□□□□□ -0.25
CNN3-203ENST00000415017 METTL18O95568 372 aa13.49□□□□□ -0.25
CNN3-203ENST00000415017 EGFP01133 1207 aa13.49□□□□□ -0.25
CNN3-203ENST00000415017 KRT14P02533 472 aa13.49□□□□□ -0.25
CNN3-203ENST00000415017 ZSCAN5DPP0CG00 497 aa13.49□□□□□ -0.25
CNN3-203ENST00000415017 CHRNB1P11230 501 aa13.49□□□□□ -0.25
CNN3-203ENST00000415017 CES1P23141 567 aa13.49□□□□□ -0.25
CNN3-203ENST00000415017 NIPAL4Q0D2K0 466 aa13.49□□□□□ -0.25
CNN3-203ENST00000415017 SEMA5AQ13591 1074 aa13.49□□□□□ -0.25
CNN3-203ENST00000415017 ZNF234Q14588 700 aa13.49□□□□□ -0.25
CNN3-203ENST00000415017 DLG2Q15700 870 aa13.49□□□□□ -0.25
CNN3-203ENST00000415017 PARP6Q2NL67 630 aa13.49□□□□□ -0.25
CNN3-203ENST00000415017 HNRNPA1L2Q32P51 320 aaKnown RBP13.49□□□□□ -0.25
CNN3-203ENST00000415017 FBXO43Q4G163 708 aa13.49□□□□□ -0.25
CNN3-203ENST00000415017 EMC10Q5UCC4 262 aa13.49□□□□□ -0.25
CNN3-203ENST00000415017 KCTD11Q693B1 232 aa13.49□□□□□ -0.25
CNN3-203ENST00000415017 C22orf39Q6P5X5 142 aa13.49□□□□□ -0.25
CNN3-203ENST00000415017 LEKR1Q6ZMV7 388 aa13.49□□□□□ -0.25
CNN3-203ENST00000415017 PRUNE1Q86TP1 453 aa13.49□□□□□ -0.25
CNN3-203ENST00000415017 PRPF39Q86UA1 669 aaKnown RBP13.49□□□□□ -0.25
CNN3-203ENST00000415017 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.49□□□□□ -0.25
CNN3-203ENST00000415017 PCDH20Q8N6Y1 951 aaKnown RBP13.49□□□□□ -0.25
CNN3-203ENST00000415017 CCDC89Q8N998 374 aa13.49□□□□□ -0.25
CNN3-203ENST00000415017 CYB5D2Q8WUJ1 264 aa13.49□□□□□ -0.25
CNN3-203ENST00000415017 NSMCE1Q8WV22 266 aa13.49□□□□□ -0.25
CNN3-203ENST00000415017 UCMAQ8WVF2 138 aa13.49□□□□□ -0.25
CNN3-203ENST00000415017 FAM3CQ92520 227 aa13.49□□□□□ -0.25
CNN3-203ENST00000415017 PTPRN2Q92932 1015 aa13.49□□□□□ -0.25
CNN3-203ENST00000415017 NUDCD1Q96RS6 583 aa13.49□□□□□ -0.25
CNN3-203ENST00000415017 GABRG3Q99928 467 aa13.49□□□□□ -0.25
CNN3-203ENST00000415017 ERP44Q9BS26 406 aa13.49□□□□□ -0.25
CNN3-203ENST00000415017 OSBPL6Q9BZF3 934 aa13.49□□□□□ -0.25
CNN3-203ENST00000415017 CIPCQ9C0C6 399 aa13.49□□□□□ -0.25
CNN3-203ENST00000415017 GBA3Q9H227 469 aa13.49□□□□□ -0.25
CNN3-203ENST00000415017 PAK5Q9P286 719 aa13.49□□□□□ -0.25
CNN3-203ENST00000415017 DMGDHQ9UI17 866 aaKnown RBP13.49□□□□□ -0.25
CNN3-203ENST00000415017 TECTAO75443 2155 aa13.49□□□□□ -0.25
CNN3-203ENST00000415017 TTC28Q96AY4 2481 aa13.49□□□□□ -0.25
CNN3-203ENST00000415017 TARSL2A2RTX5 802 aaKnown RBP13.48□□□□□ -0.25
CNN3-203ENST00000415017 STK10O94804 968 aaKnown RBP13.48□□□□□ -0.25
CNN3-203ENST00000415017 NFKB1P19838 968 aa13.48□□□□□ -0.25
CNN3-203ENST00000415017 NUMBP49757 651 aa13.48□□□□□ -0.25
CNN3-203ENST00000415017 MRPS21P82921 87 aaKnown RBP13.48□□□□□ -0.25
CNN3-203ENST00000415017 ZXDAP98168 799 aa13.48□□□□□ -0.25
CNN3-203ENST00000415017 GRSF1Q12849 480 aaKnown RBP eCLIP13.48□□□□□ -0.25
CNN3-203ENST00000415017 HSF5Q4G112 596 aaPredicted RBP13.48□□□□□ -0.25
CNN3-203ENST00000415017 FAM182AQ5T1J6 154 aa13.48□□□□□ -0.25
CNN3-203ENST00000415017 EGFLAMQ63HQ2 1017 aa13.48□□□□□ -0.25
CNN3-203ENST00000415017 C8orf74Q6P047 294 aa13.48□□□□□ -0.25
CNN3-203ENST00000415017 ZNF852Q6ZMS4 543 aa13.48□□□□□ -0.25
CNN3-203ENST00000415017 PID1Q7Z2X4 250 aa13.48□□□□□ -0.25
CNN3-203ENST00000415017 ZNF354CQ86Y25 554 aa13.48□□□□□ -0.25
CNN3-203ENST00000415017 SYNPOQ8N3V7 929 aa13.48□□□□□ -0.25
CNN3-203ENST00000415017 ATP11CQ8NB49 1132 aa13.48□□□□□ -0.25
CNN3-203ENST00000415017 OR2AP1Q8NGE2 309 aa13.48□□□□□ -0.25
CNN3-203ENST00000415017 OR2A12Q8NGT7 310 aa13.48□□□□□ -0.25
CNN3-203ENST00000415017 CCHCR1Q8TD31 782 aa13.48□□□□□ -0.25
CNN3-203ENST00000415017 USP33Q8TEY7 942 aa13.48□□□□□ -0.25
CNN3-203ENST00000415017 SHDQ96IW2 340 aa13.48□□□□□ -0.25
CNN3-203ENST00000415017 CCDC114Q96M63 670 aa13.48□□□□□ -0.25
CNN3-203ENST00000415017 NELL2Q99435 816 aa13.48□□□□□ -0.25
CNN3-203ENST00000415017 CEP41Q9BYV8 373 aa13.48□□□□□ -0.25
CNN3-203ENST00000415017 CPEB1Q9BZB8 566 aaKnown RBP13.48□□□□□ -0.25
CNN3-203ENST00000415017 POLR1EQ9GZS1 481 aaKnown RBP13.48□□□□□ -0.25
CNN3-203ENST00000415017 NT5MQ9NPB1 228 aa13.48□□□□□ -0.25
CNN3-203ENST00000415017 MUTYHQ9UIF7 546 aa13.48□□□□□ -0.25
CNN3-203ENST00000415017 PLA2G4CQ9UP65 541 aa13.48□□□□□ -0.25
CNN3-203ENST00000415017 FCF1Q9Y324 198 aaKnown RBP13.48□□□□□ -0.25
CNN3-203ENST00000415017 FARP1Q9Y4F1 1045 aaPredicted RBP13.48□□□□□ -0.25
CNN3-203ENST00000415017 A0A0C4DFX4 3053 aa13.48□□□□□ -0.25
CNN3-203ENST00000415017 KANSL1LA0AUZ9 987 aa13.47□□□□□ -0.25
CNN3-203ENST00000415017 TTC34A8MYJ7 566 aa13.47□□□□□ -0.25
CNN3-203ENST00000415017 CHURC1-FNTBB4DL54 471 aa13.47□□□□□ -0.25
CNN3-203ENST00000415017 SUN1O94901 812 aa13.47□□□□□ -0.25
CNN3-203ENST00000415017 IFNB1P01574 187 aa13.47□□□□□ -0.25
CNN3-203ENST00000415017 FDFT1P37268 417 aa13.47□□□□□ -0.25
CNN3-203ENST00000415017 IL12RB1P42701 662 aa13.47□□□□□ -0.25
CNN3-203ENST00000415017 SKOR1P84550 965 aa13.47□□□□□ -0.25
CNN3-203ENST00000415017 ZNF235Q14590 738 aa13.47□□□□□ -0.25
CNN3-203ENST00000415017 CARD16Q5EG05 197 aa13.47□□□□□ -0.25
CNN3-203ENST00000415017 C9orf64Q5T6V5 341 aa13.47□□□□□ -0.25
CNN3-203ENST00000415017 ITPRIPL1Q6GPH6 555 aa13.47□□□□□ -0.25
CNN3-203ENST00000415017 NCEH1Q6PIU2 408 aa13.47□□□□□ -0.25
CNN3-203ENST00000415017 KDELC1Q6UW63 502 aa13.47□□□□□ -0.25
CNN3-203ENST00000415017 GSTA5Q7RTV2 222 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms