RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 EPS8L1Q8TE68 723 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 COL26A1Q96A83 441 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 CYTH2Q99418 400 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 PKP4Q99569 1192 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 CNPY3Q9BT09 278 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 MENTQ9BUN1 341 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 PITPNM3Q9BZ71 974 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 RANBP3Q9H6Z4 567 aaPredicted RBP5.31□□□□□ -1.56
HERC4-205ENST00000412272 GSN-AS1Q9NRJ2 163 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 PLSCR3Q9NRY6 295 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 ACOXLQ9NUZ1 547 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 GLTPQ9NZD2 209 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 OR6C2Q9NZP2 312 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 TMOD2Q9NZR1 351 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 CYTH4Q9UIA0 394 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 FBXL21Q9UKT6 434 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 COPS3Q9UNS2 423 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 BOLA1Q9Y3E2 137 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 AUP1Q9Y679 476 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 NT5C1B-RDH14C9J2C7 533 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 GMDSO60547 372 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 EIF1BO60739 113 aaKnown RBP5.3□□□□□ -1.56
HERC4-205ENST00000412272 ENO3P13929 434 aaPredicted RBP5.3□□□□□ -1.56
HERC4-205ENST00000412272 ITGB6P18564 788 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 DDCP20711 480 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 MMP8P22894 467 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 EIF1P41567 113 aaKnown RBP5.3□□□□□ -1.56
HERC4-205ENST00000412272 GRM5P41594 1212 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 MEOX2P50222 304 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 METAP2P50579 478 aaKnown RBP eCLIP5.3□□□□□ -1.56
HERC4-205ENST00000412272 RIDAP52758 137 aaKnown RBP5.3□□□□□ -1.56
HERC4-205ENST00000412272 UBE2IP63279 158 aaKnown RBP5.3□□□□□ -1.56
HERC4-205ENST00000412272 DNASE1L3Q13609 305 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 SPARCL1Q14515 664 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 CBX2Q14781 532 aaPredicted RBP5.3□□□□□ -1.56
HERC4-205ENST00000412272 DDR2Q16832 855 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 KIAA1755Q5JYT7 1200 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 ARL6IP4Q66PJ3 421 aaKnown RBP5.3□□□□□ -1.56
HERC4-205ENST00000412272 PLEKHG7Q6ZR37 379 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 HAUS6Q7Z4H7 955 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 PRSS42Q7Z5A4 293 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 SLC9B2Q86UD5 537 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 LIX1Q8N485 282 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 POU5F2Q8N7G0 328 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 NSL1Q96IY1 281 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 FRMD8P1Q9BZ68 369 aaPredicted RBP5.3□□□□□ -1.56
HERC4-205ENST00000412272 C6orf62Q9GZU0 229 aaPredicted RBP5.3□□□□□ -1.56
HERC4-205ENST00000412272 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.3□□□□□ -1.562e-7■■□□□ 11.7
HERC4-205ENST00000412272 RIMS4Q9H426 269 aaPredicted RBP5.3□□□□□ -1.56
HERC4-205ENST00000412272 GOLPH3Q9H4A6 298 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 GJB4Q9NTQ9 266 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 PARVAQ9NVD7 372 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 C5P01031 1676 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 ZMYM2Q9UBW7 1377 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 NUP188Q5SRE5 1749 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 H3BMQ9 156 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 SGK1O00141 431 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 SLC22A2O15244 555 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 ULK1O75385 1050 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 PROS1P07225 676 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 CSF2RAP15509 400 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 UQCRC1P31930 480 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 FOXN2P32314 431 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 ATP5C1P36542 298 aaKnown RBP5.3□□□□□ -1.56
HERC4-205ENST00000412272 GRIA1P42261 906 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 MLLT10P55197 1068 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 TBCCQ15814 346 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 LRRC36Q1X8D7 754 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 OGFRL1Q5TC84 451 aaPredicted RBP5.3□□□□□ -1.56
HERC4-205ENST00000412272 RIPOR1Q6ZS17 1223 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 UTS2BQ765I0 119 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 P3H2Q8IVL5 708 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 SETD7Q8WTS6 366 aaKnown RBP5.3□□□□□ -1.56
HERC4-205ENST00000412272 PTP4A1Q93096 173 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 C18orf8Q96DM3 657 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 ZNF512Q96ME7 567 aaPredicted RBP5.3□□□□□ -1.56
HERC4-205ENST00000412272 FOPNLQ96NB1 174 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 CSRNP1Q96S65 589 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 DCLK3Q9C098 648 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 TNKS2Q9H2K2 1166 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 KCNH7Q9NS40 1196 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 CPA4Q9UI42 421 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 CNOT11Q9UKZ1 510 aaKnown RBP5.3□□□□□ -1.56
HERC4-205ENST00000412272 PHTF1Q9UMS5 762 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 CAB39Q9Y376 341 aaPredicted RBP5.3□□□□□ -1.56
HERC4-205ENST00000412272 FARP1Q9Y4F1 1045 aaPredicted RBP5.3□□□□□ -1.56
HERC4-205ENST00000412272 NCANO14594 1321 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 A0A1W2PPW3 197 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 ZNF487B1APH4 448 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 PSMA7O14818 248 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 TM7SF2O76062 418 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 PGRP06401 933 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 ABHD2P08910 425 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 IFIT1P09914 478 aaKnown RBP5.3□□□□□ -1.56
HERC4-205ENST00000412272 PMS1P54277 932 aaKnown RBP5.3□□□□□ -1.56
HERC4-205ENST00000412272 DSC2Q02487 901 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 LIPEQ05469 1076 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 CUL2Q13617 745 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 GRB7Q14451 532 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 PFKFB4Q16877 469 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms