RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 GYS2P54840 703 aa12.65□□□□□ -0.38
CHMP3-204ENST00000409727 GEMP55040 296 aa12.65□□□□□ -0.38
CHMP3-204ENST00000409727 CBX1P83916 185 aa12.65□□□□□ -0.38
CHMP3-204ENST00000409727 PPARDQ03181 441 aa12.65□□□□□ -0.38
CHMP3-204ENST00000409727 LMAN2Q12907 356 aa12.65□□□□□ -0.38
CHMP3-204ENST00000409727 LY6G5CQ5SRR4 150 aa12.65□□□□□ -0.38
CHMP3-204ENST00000409727 TRIM68Q6AZZ1 485 aa12.65□□□□□ -0.38
CHMP3-204ENST00000409727 NAPEPLDQ6IQ20 393 aa12.65□□□□□ -0.38
CHMP3-204ENST00000409727 PRPF39Q86UA1 669 aaKnown RBP12.65□□□□□ -0.38
CHMP3-204ENST00000409727 SLC25A41Q8N5S1 370 aa12.65□□□□□ -0.38
CHMP3-204ENST00000409727 NAT16Q8N8M0 369 aa12.65□□□□□ -0.38
CHMP3-204ENST00000409727 FBF1Q8TES7 1133 aa12.65□□□□□ -0.38
CHMP3-204ENST00000409727 STAMBPL1Q96FJ0 436 aa12.65□□□□□ -0.38
CHMP3-204ENST00000409727 IMP4Q96G21 291 aaKnown RBP12.65□□□□□ -0.38
CHMP3-204ENST00000409727 SEMA3CQ99985 751 aa12.65□□□□□ -0.38
CHMP3-204ENST00000409727 TBL1YQ9BQ87 522 aa12.65□□□□□ -0.38
CHMP3-204ENST00000409727 POLR1EQ9GZS1 481 aaKnown RBP12.65□□□□□ -0.38
CHMP3-204ENST00000409727 SLC25A51Q9H1U9 297 aa12.65□□□□□ -0.38
CHMP3-204ENST00000409727 TMBIM4Q9HC24 238 aa12.65□□□□□ -0.38
CHMP3-204ENST00000409727 ABCB8Q9NUT2 735 aa12.65□□□□□ -0.38
CHMP3-204ENST00000409727 VPS51Q9UID3 782 aa12.65□□□□□ -0.38
CHMP3-204ENST00000409727 ZMYM5Q9UJ78 669 aa12.65□□□□□ -0.38
CHMP3-204ENST00000409727 SZT2Q5T011 3432 aa12.64□□□□□ -0.39
CHMP3-204ENST00000409727 GOLGA8KD6RF30 607 aa12.64□□□□□ -0.39
CHMP3-204ENST00000409727 ATP9BO43861 1147 aa12.64□□□□□ -0.39
CHMP3-204ENST00000409727 ABHD2P08910 425 aa12.64□□□□□ -0.39
CHMP3-204ENST00000409727 MLNP12872 115 aa12.64□□□□□ -0.39
CHMP3-204ENST00000409727 WNT3AP56704 352 aa12.64□□□□□ -0.39
CHMP3-204ENST00000409727 DLX2Q07687 328 aaPredicted RBP12.64□□□□□ -0.39
CHMP3-204ENST00000409727 MPP7Q5T2T1 576 aa12.64□□□□□ -0.39
CHMP3-204ENST00000409727 CERCAMQ5T4B2 595 aa12.64□□□□□ -0.39
CHMP3-204ENST00000409727 CES3Q6UWW8 571 aa12.64□□□□□ -0.39
CHMP3-204ENST00000409727 ZNF783Q6ZMS7 281 aa12.64□□□□□ -0.39
CHMP3-204ENST00000409727 UNC5AQ6ZN44 842 aa12.64□□□□□ -0.39
CHMP3-204ENST00000409727 MICALL1Q8N3F8 863 aa12.64□□□□□ -0.39
CHMP3-204ENST00000409727 BBS5Q8N3I7 341 aa12.64□□□□□ -0.39
CHMP3-204ENST00000409727 IRF7Q92985 503 aa12.64□□□□□ -0.39
CHMP3-204ENST00000409727 ZFYVE19Q96K21 471 aa12.64□□□□□ -0.39
CHMP3-204ENST00000409727 MRGPRX2Q96LB1 330 aa12.64□□□□□ -0.39
CHMP3-204ENST00000409727 ZNF599Q96NL3 588 aa12.64□□□□□ -0.39
CHMP3-204ENST00000409727 XPO6Q96QU8 1125 aaKnown RBP12.64□□□□□ -0.39
CHMP3-204ENST00000409727 EBNA1BP2Q99848 306 aaKnown RBP12.64□□□□□ -0.39
CHMP3-204ENST00000409727 CCDC77Q9BR77 488 aa12.64□□□□□ -0.39
CHMP3-204ENST00000409727 CASS4Q9NQ75 786 aa12.64□□□□□ -0.39
CHMP3-204ENST00000409727 SPHK2Q9NRA0 654 aa12.64□□□□□ -0.39
CHMP3-204ENST00000409727 DUS2Q9NX74 493 aaKnown RBP12.64□□□□□ -0.39
CHMP3-204ENST00000409727 TBC1D14Q9P2M4 693 aa12.64□□□□□ -0.39
CHMP3-204ENST00000409727 SEPT3Q9UH03 358 aa12.64□□□□□ -0.39
CHMP3-204ENST00000409727 TBK1Q9UHD2 729 aa12.64□□□□□ -0.39
CHMP3-204ENST00000409727 FCF1Q9Y324 198 aaKnown RBP12.64□□□□□ -0.39
CHMP3-204ENST00000409727 OR51B4Q9Y5P0 310 aa12.64□□□□□ -0.39
CHMP3-204ENST00000409727 TCRBV9S1A1TA0A576 114 aa12.63□□□□□ -0.39
CHMP3-204ENST00000409727 CCDC78A2IDD5 438 aa12.63□□□□□ -0.39
CHMP3-204ENST00000409727 K7ERQ8 282 aa12.63□□□□□ -0.39
CHMP3-204ENST00000409727 PSMD3O43242 534 aa12.63□□□□□ -0.39
CHMP3-204ENST00000409727 TMCC1O94876 653 aa12.63□□□□□ -0.39
CHMP3-204ENST00000409727 MT-CO1P00395 513 aa12.63□□□□□ -0.39
CHMP3-204ENST00000409727 MMP2P08253 660 aa12.63□□□□□ -0.39
CHMP3-204ENST00000409727 TYRP14679 529 aa12.63□□□□□ -0.39
CHMP3-204ENST00000409727 WEE1P30291 646 aa12.63□□□□□ -0.39
CHMP3-204ENST00000409727 CHRNA4P43681 627 aa12.63□□□□□ -0.39
CHMP3-204ENST00000409727 RGRP47804 291 aa12.63□□□□□ -0.39
CHMP3-204ENST00000409727 IFNAR2P48551 515 aa12.63□□□□□ -0.39
CHMP3-204ENST00000409727 SCNN1BP51168 640 aa12.63□□□□□ -0.39
CHMP3-204ENST00000409727 IHHQ14623 411 aa12.63□□□□□ -0.39
CHMP3-204ENST00000409727 CYTH1Q15438 398 aa12.63□□□□□ -0.39
CHMP3-204ENST00000409727 TMEM184AQ6ZMB5 413 aa12.63□□□□□ -0.39
CHMP3-204ENST00000409727 ADGRG2Q8IZP9 1017 aa12.63□□□□□ -0.39
CHMP3-204ENST00000409727 FIBINQ8TAL6 211 aa12.63□□□□□ -0.39
CHMP3-204ENST00000409727 ARRDC2Q8TBH0 407 aa12.63□□□□□ -0.39
CHMP3-204ENST00000409727 LRRC39Q96DD0 335 aa12.63□□□□□ -0.39
CHMP3-204ENST00000409727 ALG14Q96F25 216 aa12.63□□□□□ -0.39
CHMP3-204ENST00000409727 ASB16Q96NS5 453 aa12.63□□□□□ -0.39
CHMP3-204ENST00000409727 CLDND1Q9NY35 253 aa12.63□□□□□ -0.39
CHMP3-204ENST00000409727 SAMD15Q9P1V8 674 aa12.63□□□□□ -0.39
CHMP3-204ENST00000409727 KIAA1522Q9P206 1035 aaPredicted RBP12.63□□□□□ -0.39
CHMP3-204ENST00000409727 RABGEF1Q9UJ41 708 aa12.63□□□□□ -0.39
CHMP3-204ENST00000409727 CHD5Q8TDI0 1954 aa12.63□□□□□ -0.39
CHMP3-204ENST00000409727 MYOFQ9NZM1 2061 aa12.63□□□□□ -0.39
CHMP3-204ENST00000409727 REV3LO60673 3130 aa12.63□□□□□ -0.39
CHMP3-204ENST00000409727 FOXO6A8MYZ6 492 aa12.63□□□□□ -0.39
CHMP3-204ENST00000409727 RGS16O15492 202 aaPredicted RBP12.63□□□□□ -0.39
CHMP3-204ENST00000409727 TBX10O75333 385 aa12.63□□□□□ -0.39
CHMP3-204ENST00000409727 ZMPSTE24O75844 475 aa12.63□□□□□ -0.39
CHMP3-204ENST00000409727 IGFBP4P22692 258 aa12.63□□□□□ -0.39
CHMP3-204ENST00000409727 HLA-FP30511 346 aa12.63□□□□□ -0.39
CHMP3-204ENST00000409727 CDH17Q12864 832 aa12.63□□□□□ -0.39
CHMP3-204ENST00000409727 MPP3Q13368 585 aa12.63□□□□□ -0.39
CHMP3-204ENST00000409727 ADAM15Q13444 863 aa12.63□□□□□ -0.39
CHMP3-204ENST00000409727 STAT4Q14765 748 aa12.63□□□□□ -0.39
CHMP3-204ENST00000409727 GRIN2CQ14957 1233 aa12.63□□□□□ -0.39
CHMP3-204ENST00000409727 KDELC1Q6UW63 502 aa12.63□□□□□ -0.39
CHMP3-204ENST00000409727 LINC00523Q86TU6 105 aa12.63□□□□□ -0.39
CHMP3-204ENST00000409727 DCAF4L2Q8NA75 395 aa12.63□□□□□ -0.39
CHMP3-204ENST00000409727 SMARCD2Q92925 531 aa12.63□□□□□ -0.39
CHMP3-204ENST00000409727 ATP6V1G3Q96LB4 118 aa12.63□□□□□ -0.39
CHMP3-204ENST00000409727 FAM161BQ96MY7 647 aa12.63□□□□□ -0.39
CHMP3-204ENST00000409727 C2orf49Q9BVC5 232 aaPredicted RBP12.63□□□□□ -0.39
CHMP3-204ENST00000409727 PRO3102Q9H379 93 aa12.63□□□□□ -0.39
CHMP3-204ENST00000409727 PLAC1Q9HBJ0 212 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms