RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 DUS2Q9NX74 493 aaKnown RBP8.51□□□□□ -1.05
SCN9A-203ENST00000409672 PHTF1Q9UMS5 762 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 LIN7AO14910 233 aaPredicted RBP8.51□□□□□ -1.05
SCN9A-203ENST00000409672 STATHP02808 62 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 CCNYL3P0C7X3 344 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 ELOAQ14241 798 aaKnown RBP8.51□□□□□ -1.05
SCN9A-203ENST00000409672 POTEAQ6S8J7 498 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 ZNF677Q86XU0 584 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 DNERQ8NFT8 737 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 RUBCNQ92622 972 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 CDHR5Q9HBB8 845 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 KLC4Q9NSK0 619 aa8.51□□□□□ -1.05
SCN9A-203ENST00000409672 TRIM64BA6NI03 449 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 GIMD1P0DJR0 217 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 MDH1P40925 334 aaKnown RBP8.5□□□□□ -1.05
SCN9A-203ENST00000409672 CD151P48509 253 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 TAS2R41P59536 307 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 PDK2Q15119 407 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 PEG10Q86TG7 708 aaKnown RBP8.5□□□□□ -1.05
SCN9A-203ENST00000409672 CFAP206Q8IYR0 622 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 TNS4Q8IZW8 715 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 VANGL1Q8TAA9 524 aaPredicted RBP8.5□□□□□ -1.05
SCN9A-203ENST00000409672 FAM126AQ9BYI3 521 aaPredicted RBP8.5□□□□□ -1.05
SCN9A-203ENST00000409672 GOLGA2P5Q9HBQ8 144 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 WASF2Q9Y6W5 498 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 NFASCO94856 1347 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 BCLAF3A2AJT9 711 aaKnown RBP8.5□□□□□ -1.05
SCN9A-203ENST00000409672 TPST2O60704 377 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 HOXA7P31268 230 aaPredicted RBP8.5□□□□□ -1.05
SCN9A-203ENST00000409672 ITGA7Q13683 1181 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 ARMCX4Q5H9R4 360 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 DNAJA3Q96EY1 480 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 CAPNS2Q96L46 248 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 TMEM79Q9BSE2 394 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 MYH11P35749 1972 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 ZNF839A8K0R7 811 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 MYL12BO14950 172 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 ATP5F1P24539 256 aaPredicted RBP8.5□□□□□ -1.05
SCN9A-203ENST00000409672 CBX2Q14781 532 aaPredicted RBP8.5□□□□□ -1.05
SCN9A-203ENST00000409672 SGCBQ16585 318 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 PPP1R15BQ5SWA1 713 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 APTXQ7Z2E3 356 aaKnown RBP8.5□□□□□ -1.05
SCN9A-203ENST00000409672 TMPRSS11BQ86T26 416 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 POLR1EQ9GZS1 481 aaKnown RBP8.5□□□□□ -1.05
SCN9A-203ENST00000409672 ABCC13Q9NSE7 274 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 FAM153AQ9UHL3 310 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 DISP1Q96F81 1524 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 CDH3P22223 829 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 PPM1AP35813 382 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 BRCC3P46736 316 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 GIT2Q14161 759 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 FASTKQ14296 549 aaKnown RBP8.5□□□□□ -1.05
SCN9A-203ENST00000409672 CIR1Q86X95 450 aaPredicted RBP8.5□□□□□ -1.05
SCN9A-203ENST00000409672 ANKFN1Q8N957 763 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 OLFM3Q96PB7 478 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 PNO1Q9NRX1 252 aaKnown RBP8.5□□□□□ -1.05
SCN9A-203ENST00000409672 BTBD3Q9Y2F9 522 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 SNPHO15079 494 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 RGS14O43566 566 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 CCNOP22674 350 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 PSMB4P28070 264 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 SLC20A2Q08357 652 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 PLEKHA7Q6IQ23 1121 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 REPS1Q96D71 796 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 PANX3Q96QZ0 392 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 MCMBPQ9BTE3 642 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 NRDE2Q9H7Z3 1164 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 SESN1Q9Y6P5 492 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 B4DGG1 531 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 PER2O15055 1255 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 GNRH1P01148 92 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 SEC24CP53992 1094 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 STX5Q13190 355 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 DEF8Q6ZN54 512 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 B3GALT6Q96L58 329 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 SPATA9Q9BWV2 254 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 DGCR6LQ9BY27 220 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 PSME2Q9UL46 239 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 ACOT9Q9Y305 439 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 PSIP1O75475 530 aaKnown RBP8.5□□□□□ -1.05
SCN9A-203ENST00000409672 ETS1P14921 441 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 CPA3P15088 417 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 ALOX12P18054 663 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 SMAD3P84022 425 aaKnown RBP8.5□□□□□ -1.05
SCN9A-203ENST00000409672 HYIQ5T013 277 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 ARHGEF19Q8IW93 802 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 CD302Q8IX05 232 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 CCDC126Q96EE4 140 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 TMX2Q9Y320 296 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 ALKQ9UM73 1620 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 IL6P05231 212 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 PDX1P52945 283 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 GRB10Q13322 594 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 TSNQ15631 228 aaKnown RBP8.5□□□□□ -1.05
SCN9A-203ENST00000409672 SATL1Q86VE3 508 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 ARMC8Q8IUR7 673 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 FAM126BQ8IXS8 530 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 ADSSL1Q8N142 457 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 OR2L5Q8NG80 312 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 OR4A15Q8NGL6 344 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms