RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 SARDHQ9UL12 918 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 PCDHA1Q9Y5I3 950 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 DOCK5Q9H7D0 1870 aa10.78□□□□□ -0.68
NIF3L1-204ENST00000409357 TMEM191CA6NGB0 347 aa10.78□□□□□ -0.68
NIF3L1-204ENST00000409357 FAM159BA6NKW6 160 aa10.78□□□□□ -0.68
NIF3L1-204ENST00000409357 TMEM191BP0C7N4 346 aa10.78□□□□□ -0.68
NIF3L1-204ENST00000409357 CD58P19256 250 aa10.78□□□□□ -0.68
NIF3L1-204ENST00000409357 CD247P20963 164 aa10.78□□□□□ -0.68
NIF3L1-204ENST00000409357 TCEA1P23193 301 aaKnown RBP10.78□□□□□ -0.68
NIF3L1-204ENST00000409357 PIK3R1P27986 724 aa10.78□□□□□ -0.68
NIF3L1-204ENST00000409357 GCLMP48507 274 aa10.78□□□□□ -0.68
NIF3L1-204ENST00000409357 CSE1LP55060 971 aaKnown RBP10.78□□□□□ -0.68
NIF3L1-204ENST00000409357 ABCE1P61221 599 aaKnown RBP10.78□□□□□ -0.68
NIF3L1-204ENST00000409357 MPP1Q00013 466 aa10.78□□□□□ -0.68
NIF3L1-204ENST00000409357 PMS2P3Q13401 168 aa10.78□□□□□ -0.68
NIF3L1-204ENST00000409357 PDE1CQ14123 709 aaPredicted RBP10.78□□□□□ -0.68
NIF3L1-204ENST00000409357 TRIM25Q14258 630 aaKnown RBP10.78□□□□□ -0.68
NIF3L1-204ENST00000409357 PIGHQ14442 188 aaPredicted RBP10.78□□□□□ -0.68
NIF3L1-204ENST00000409357 KCNJ11Q14654 390 aa10.78□□□□□ -0.68
NIF3L1-204ENST00000409357 LLGL1Q15334 1064 aa10.78□□□□□ -0.68
NIF3L1-204ENST00000409357 FSCN1Q16658 493 aaKnown RBP10.78□□□□□ -0.68
NIF3L1-204ENST00000409357 UBE2SQ16763 222 aa10.78□□□□□ -0.68
NIF3L1-204ENST00000409357 SLC36A3Q495N2 470 aa10.78□□□□□ -0.68
NIF3L1-204ENST00000409357 ZNF394Q53GI3 561 aa10.78□□□□□ -0.68
NIF3L1-204ENST00000409357 C1orf53Q5VUE5 145 aa10.78□□□□□ -0.68
NIF3L1-204ENST00000409357 CAMK1DQ8IU85 385 aa10.78□□□□□ -0.68
NIF3L1-204ENST00000409357 EXOC8Q8IYI6 725 aa10.78□□□□□ -0.68
NIF3L1-204ENST00000409357 NDUFAF2Q8N183 169 aa10.78□□□□□ -0.68
NIF3L1-204ENST00000409357 PHTF2Q8N3S3 785 aa10.78□□□□□ -0.68
NIF3L1-204ENST00000409357 PDZD8Q8NEN9 1154 aa10.78□□□□□ -0.68
NIF3L1-204ENST00000409357 DNERQ8NFT8 737 aa10.78□□□□□ -0.68
NIF3L1-204ENST00000409357 PPP1R13LQ8WUF5 828 aa10.78□□□□□ -0.68
NIF3L1-204ENST00000409357 AFG1LQ8WV93 481 aa10.78□□□□□ -0.68
NIF3L1-204ENST00000409357 KLHL32Q96NJ5 620 aa10.78□□□□□ -0.68
NIF3L1-204ENST00000409357 LENG8Q96PV6 779 aaPredicted RBP10.78□□□□□ -0.68
NIF3L1-204ENST00000409357 ACCSQ96QU6 501 aa10.78□□□□□ -0.68
NIF3L1-204ENST00000409357 SNX18Q96RF0 628 aa10.78□□□□□ -0.68
NIF3L1-204ENST00000409357 TSEN34Q9BSV6 310 aaKnown RBP10.78□□□□□ -0.68
NIF3L1-204ENST00000409357 WDR11Q9BZH6 1224 aa10.78□□□□□ -0.68
NIF3L1-204ENST00000409357 OR2B2Q9GZK3 357 aa10.78□□□□□ -0.68
NIF3L1-204ENST00000409357 ZNF395Q9H8N7 513 aaPredicted RBP10.78□□□□□ -0.68
NIF3L1-204ENST00000409357 STARD7Q9NQZ5 370 aa10.78□□□□□ -0.68
NIF3L1-204ENST00000409357 GDAP2Q9NXN4 497 aa10.78□□□□□ -0.68
NIF3L1-204ENST00000409357 CHD7Q9P2D1 2997 aa10.78□□□□□ -0.68
NIF3L1-204ENST00000409357 COPG2Q9UBF2 871 aa10.78□□□□□ -0.68
NIF3L1-204ENST00000409357 NXF1Q9UBU9 619 aaKnown RBP10.78□□□□□ -0.68
NIF3L1-204ENST00000409357 UGT2A1Q9Y4X1 527 aa10.78□□□□□ -0.68
NIF3L1-204ENST00000409357 VCANP13611 3396 aa10.78□□□□□ -0.68
NIF3L1-204ENST00000409357 MN1Q10571 1320 aaPredicted RBP10.77□□□□□ -0.68
NIF3L1-204ENST00000409357 SCN10AQ9Y5Y9 1956 aa10.77□□□□□ -0.69
NIF3L1-204ENST00000409357 MOXD2PA6NHM9 499 aa10.77□□□□□ -0.69
NIF3L1-204ENST00000409357 CYB561D2O14569 222 aa10.77□□□□□ -0.69
NIF3L1-204ENST00000409357 ZBTB14O43829 449 aa10.77□□□□□ -0.69
NIF3L1-204ENST00000409357 PLIN3O60664 434 aa10.77□□□□□ -0.69
NIF3L1-204ENST00000409357 GMNNO75496 209 aa10.77□□□□□ -0.69
NIF3L1-204ENST00000409357 BANF1O75531 89 aa10.77□□□□□ -0.69
NIF3L1-204ENST00000409357 MTRF1O75570 445 aaKnown RBP10.77□□□□□ -0.69
NIF3L1-204ENST00000409357 STAM2O75886 525 aa10.77□□□□□ -0.69
NIF3L1-204ENST00000409357 FKBP9O95302 570 aa10.77□□□□□ -0.69
NIF3L1-204ENST00000409357 KRT1P04264 644 aa10.77□□□□□ -0.69
NIF3L1-204ENST00000409357 MAP4P27816 1152 aaKnown RBP10.77□□□□□ -0.69
NIF3L1-204ENST00000409357 SREBF1P36956 1147 aa10.77□□□□□ -0.69
NIF3L1-204ENST00000409357 GRIK1P39086 918 aa10.77□□□□□ -0.69
NIF3L1-204ENST00000409357 PRKAA2P54646 552 aa10.77□□□□□ -0.69
NIF3L1-204ENST00000409357 STX1BP61266 288 aa10.77□□□□□ -0.69
NIF3L1-204ENST00000409357 NKX3-2P78367 333 aa10.77□□□□□ -0.69
NIF3L1-204ENST00000409357 DPYSL3Q14195 570 aa10.77□□□□□ -0.69
NIF3L1-204ENST00000409357 DUSP28Q4G0W2 176 aa10.77□□□□□ -0.69
NIF3L1-204ENST00000409357 AASDHQ4L235 1098 aaPredicted RBP10.77□□□□□ -0.69
NIF3L1-204ENST00000409357 WDR45BQ5MNZ6 344 aa10.77□□□□□ -0.69
NIF3L1-204ENST00000409357 PPM1LQ5SGD2 360 aa10.77□□□□□ -0.69
NIF3L1-204ENST00000409357 GPR107Q5VW38 600 aa10.77□□□□□ -0.69
NIF3L1-204ENST00000409357 ZNF280DQ6N043 979 aa10.77□□□□□ -0.69
NIF3L1-204ENST00000409357 GALNT18Q6P9A2 607 aa10.77□□□□□ -0.69
NIF3L1-204ENST00000409357 ABRAXAS1Q6UWZ7 409 aa10.77□□□□□ -0.69
NIF3L1-204ENST00000409357 PLEKHG7Q6ZR37 379 aa10.77□□□□□ -0.69
NIF3L1-204ENST00000409357 USP43Q70EL4 1123 aa10.77□□□□□ -0.69
NIF3L1-204ENST00000409357 IGDCC3Q8IVU1 814 aa10.77□□□□□ -0.69
NIF3L1-204ENST00000409357 PARP8Q8N3A8 854 aa10.77□□□□□ -0.69
NIF3L1-204ENST00000409357 FAM47BQ8NA70 645 aa10.77□□□□□ -0.69
NIF3L1-204ENST00000409357 RNF169Q8NCN4 708 aa10.77□□□□□ -0.69
NIF3L1-204ENST00000409357 MCUQ8NE86 351 aa10.77□□□□□ -0.69
NIF3L1-204ENST00000409357 PIK3C3Q8NEB9 887 aa10.77□□□□□ -0.69
NIF3L1-204ENST00000409357 IL31RAQ8NI17 732 aa10.77□□□□□ -0.69
NIF3L1-204ENST00000409357 GRIN3AQ8TCU5 1115 aa10.77□□□□□ -0.69
NIF3L1-204ENST00000409357 RSAD2Q8WXG1 361 aa10.77□□□□□ -0.69
NIF3L1-204ENST00000409357 LRCH3Q96II8 777 aa10.77□□□□□ -0.69
NIF3L1-204ENST00000409357 TMEM121Q9BTD3 319 aa10.77□□□□□ -0.69
NIF3L1-204ENST00000409357 SLC4A5Q9BY07 1137 aa10.77□□□□□ -0.69
NIF3L1-204ENST00000409357 ADAM33Q9BZ11 813 aa10.77□□□□□ -0.69
NIF3L1-204ENST00000409357 FAM117AQ9C073 453 aa10.77□□□□□ -0.69
NIF3L1-204ENST00000409357 RAD21L1Q9H4I0 556 aa10.77□□□□□ -0.69
NIF3L1-204ENST00000409357 RETREG1Q9H6L5 497 aa10.77□□□□□ -0.69
NIF3L1-204ENST00000409357 ANKHQ9HCJ1 492 aa10.77□□□□□ -0.69
NIF3L1-204ENST00000409357 FBXO8Q9NRD0 319 aa10.77□□□□□ -0.69
NIF3L1-204ENST00000409357 PCDHGC3Q9UN70 934 aa10.77□□□□□ -0.69
NIF3L1-204ENST00000409357 ITM2BQ9Y287 266 aa10.77□□□□□ -0.69
NIF3L1-204ENST00000409357 MRPL11Q9Y3B7 192 aaKnown RBP10.77□□□□□ -0.69
NIF3L1-204ENST00000409357 LOC100653049A0A140TA62 436 aa10.76□□□□□ -0.69
NIF3L1-204ENST00000409357 SYCE1LA8MT33 242 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms