RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 NKAPQ8N5F7 415 aaKnown RBP12.28□□□□□ -0.44
SHANK2-203ENST00000409161 ERMAPQ96PL5 475 aaPredicted RBP12.28□□□□□ -0.44
SHANK2-203ENST00000409161 TCF12Q99081 682 aa12.28□□□□□ -0.44
SHANK2-203ENST00000409161 PTGFRNQ9P2B2 879 aa12.28□□□□□ -0.44
SHANK2-203ENST00000409161 PCDHA11Q9Y5I1 949 aa12.28□□□□□ -0.44
SHANK2-203ENST00000409161 MBD5Q9P267 1494 aa12.28□□□□□ -0.44
SHANK2-203ENST00000409161 FGFR3P22607 806 aa12.28□□□□□ -0.44
SHANK2-203ENST00000409161 PSMA1P25786 263 aaKnown RBP12.28□□□□□ -0.44
SHANK2-203ENST00000409161 TTI2Q6NXR4 508 aa12.28□□□□□ -0.44
SHANK2-203ENST00000409161 ILDR2Q71H61 639 aa12.28□□□□□ -0.44
SHANK2-203ENST00000409161 GPALPP1Q8IXQ4 340 aa12.28□□□□□ -0.44
SHANK2-203ENST00000409161 VPS35Q96QK1 796 aa12.28□□□□□ -0.44
SHANK2-203ENST00000409161 RBM4BQ9BQ04 359 aaKnown RBP12.28□□□□□ -0.44
SHANK2-203ENST00000409161 RBM4Q9BWF3 364 aaKnown RBP12.28□□□□□ -0.44
SHANK2-203ENST00000409161 TDRD1Q9BXT4 1180 aaKnown RBP12.28□□□□□ -0.44
SHANK2-203ENST00000409161 GIT1Q9Y2X7 761 aa12.28□□□□□ -0.44
SHANK2-203ENST00000409161 CLTCQ00610 1675 aaKnown RBP12.28□□□□□ -0.44
SHANK2-203ENST00000409161 WDR27A2RRH5 827 aa12.28□□□□□ -0.44
SHANK2-203ENST00000409161 G3V2T6 193 aa12.28□□□□□ -0.44
SHANK2-203ENST00000409161 LSM1O15116 133 aaKnown RBP12.28□□□□□ -0.44
SHANK2-203ENST00000409161 NDUFB10O96000 172 aa12.28□□□□□ -0.44
SHANK2-203ENST00000409161 ANPEPP15144 967 aa12.28□□□□□ -0.44
SHANK2-203ENST00000409161 NR4A1P22736 598 aa12.28□□□□□ -0.44
SHANK2-203ENST00000409161 MAPKAPK3Q16644 382 aa12.28□□□□□ -0.44
SHANK2-203ENST00000409161 PIWIL4Q7Z3Z4 852 aaKnown RBP12.28□□□□□ -0.44
SHANK2-203ENST00000409161 SYT12Q8IV01 421 aa12.28□□□□□ -0.44
SHANK2-203ENST00000409161 SEMA4AQ9H3S1 761 aa12.28□□□□□ -0.44
SHANK2-203ENST00000409161 PRR12Q9ULL5 1215 aa12.28□□□□□ -0.44
SHANK2-203ENST00000409161 FAM196BA6NMK8 535 aa12.28□□□□□ -0.44
SHANK2-203ENST00000409161 TTLL13PA6NNM8 815 aa12.28□□□□□ -0.44
SHANK2-203ENST00000409161 CHURC1-FNTBB4DL54 471 aa12.28□□□□□ -0.44
SHANK2-203ENST00000409161 RBAK-RBAKDNI3L0D1 243 aa12.28□□□□□ -0.44
SHANK2-203ENST00000409161 PAX3P23760 479 aa12.28□□□□□ -0.44
SHANK2-203ENST00000409161 MAGEA2P43356 314 aa12.28□□□□□ -0.44
SHANK2-203ENST00000409161 EPHB3P54753 998 aa12.28□□□□□ -0.44
SHANK2-203ENST00000409161 EFR3AQ14156 821 aa12.28□□□□□ -0.44
SHANK2-203ENST00000409161 ZNF268Q14587 947 aaPredicted RBP12.28□□□□□ -0.44
SHANK2-203ENST00000409161 SWT1Q5T5J6 900 aaKnown RBP12.28□□□□□ -0.44
SHANK2-203ENST00000409161 TMC7Q7Z402 723 aa12.28□□□□□ -0.44
SHANK2-203ENST00000409161 PNPT1Q8TCS8 783 aaKnown RBP12.28□□□□□ -0.44
SHANK2-203ENST00000409161 REXO5Q96IC2 774 aaKnown RBP12.28□□□□□ -0.44
SHANK2-203ENST00000409161 MED28Q9H204 178 aa12.28□□□□□ -0.44
SHANK2-203ENST00000409161 SEMA6AQ9H2E6 1030 aa12.28□□□□□ -0.44
SHANK2-203ENST00000409161 NPHP4O75161 1426 aaPredicted RBP12.28□□□□□ -0.44
SHANK2-203ENST00000409161 PAEPP09466 180 aa12.28□□□□□ -0.44
SHANK2-203ENST00000409161 PDK4Q16654 411 aa12.28□□□□□ -0.44
SHANK2-203ENST00000409161 ABRAQ8N0Z2 381 aa12.28□□□□□ -0.44
SHANK2-203ENST00000409161 LEMD2Q8NC56 503 aa12.28□□□□□ -0.44
SHANK2-203ENST00000409161 HM13Q8TCT9 377 aa12.28□□□□□ -0.44
SHANK2-203ENST00000409161 SERPINB11Q96P15 392 aa12.28□□□□□ -0.44
SHANK2-203ENST00000409161 CISHQ9NSE2 258 aa12.28□□□□□ -0.44
SHANK2-203ENST00000409161 MLXQ9UH92 298 aa12.28□□□□□ -0.44
SHANK2-203ENST00000409161 C17orf102A2RUQ5 167 aa12.28□□□□□ -0.44
SHANK2-203ENST00000409161 CYP7B1O75881 506 aa12.28□□□□□ -0.44
SHANK2-203ENST00000409161 PTPN1P18031 435 aaKnown RBP12.28□□□□□ -0.44
SHANK2-203ENST00000409161 TTPAP49638 278 aa12.28□□□□□ -0.44
SHANK2-203ENST00000409161 HMGCS2P54868 508 aa12.28□□□□□ -0.44
SHANK2-203ENST00000409161 ARPC4P59998 168 aa12.28□□□□□ -0.44
SHANK2-203ENST00000409161 RRP1BQ14684 758 aaKnown RBP12.28□□□□□ -0.44
SHANK2-203ENST00000409161 PARP6Q2NL67 630 aa12.28□□□□□ -0.44
SHANK2-203ENST00000409161 ANKRD13AQ8IZ07 590 aa12.28□□□□□ -0.44
SHANK2-203ENST00000409161 MREGQ8N565 214 aa12.28□□□□□ -0.44
SHANK2-203ENST00000409161 SUN5Q8TC36 379 aa12.28□□□□□ -0.44
SHANK2-203ENST00000409161 EVA1BQ9NVM1 165 aa12.28□□□□□ -0.44
SHANK2-203ENST00000409161 SGPL1O95470 568 aa12.27□□□□□ -0.44
SHANK2-203ENST00000409161 RRM1P23921 792 aa12.27□□□□□ -0.44
SHANK2-203ENST00000409161 CDKAL1Q5VV42 579 aa12.27□□□□□ -0.44
SHANK2-203ENST00000409161 DAW1Q8N136 415 aa12.27□□□□□ -0.44
SHANK2-203ENST00000409161 KAT5Q92993 513 aa12.27□□□□□ -0.44
SHANK2-203ENST00000409161 TARS2Q9BW92 718 aaKnown RBP12.27□□□□□ -0.44
SHANK2-203ENST00000409161 CRISPLD1Q9H336 500 aa12.27□□□□□ -0.44
SHANK2-203ENST00000409161 PNPLA8Q9NP80 782 aa12.27□□□□□ -0.44
SHANK2-203ENST00000409161 DMGDHQ9UI17 866 aaKnown RBP12.27□□□□□ -0.44
SHANK2-203ENST00000409161 DHRS7Q9Y394 339 aa12.27□□□□□ -0.44
SHANK2-203ENST00000409161 GNB5O14775 395 aa12.27□□□□□ -0.44
SHANK2-203ENST00000409161 SLC25A12O75746 678 aa12.27□□□□□ -0.44
SHANK2-203ENST00000409161 CSH1P0DML2 217 aa12.27□□□□□ -0.44
SHANK2-203ENST00000409161 CSH2P0DML3 217 aa12.27□□□□□ -0.44
SHANK2-203ENST00000409161 MAPK8P45983 427 aa12.27□□□□□ -0.44
SHANK2-203ENST00000409161 LSM12Q3MHD2 195 aaKnown RBP12.27□□□□□ -0.44
SHANK2-203ENST00000409161 HYIQ5T013 277 aa12.27□□□□□ -0.44
SHANK2-203ENST00000409161 USP45Q70EL2 814 aa12.27□□□□□ -0.44
SHANK2-203ENST00000409161 PTAR1Q7Z6K3 402 aaPredicted RBP12.27□□□□□ -0.44
SHANK2-203ENST00000409161 PCYOX1Q9UHG3 505 aa12.27□□□□□ -0.44
SHANK2-203ENST00000409161 PPP2R3BQ9Y5P8 575 aa12.27□□□□□ -0.44
SHANK2-203ENST00000409161 TYMPP19971 482 aa12.27□□□□□ -0.44
SHANK2-203ENST00000409161 ITGA3P26006 1051 aa12.27□□□□□ -0.44
SHANK2-203ENST00000409161 EIF5AP63241 154 aaKnown RBP12.27□□□□□ -0.44
SHANK2-203ENST00000409161 MCFD2Q8NI22 146 aa12.27□□□□□ -0.44
SHANK2-203ENST00000409161 LENG9Q96B70 501 aa12.27□□□□□ -0.44
SHANK2-203ENST00000409161 ZNF304Q9HCX3 659 aa12.27□□□□□ -0.44
SHANK2-203ENST00000409161 PNPLA6Q8IY17 1366 aa12.27□□□□□ -0.45
SHANK2-203ENST00000409161 NCOA3Q9Y6Q9 1424 aa12.27□□□□□ -0.45
SHANK2-203ENST00000409161 SLIT1O75093 1534 aa12.27□□□□□ -0.45
SHANK2-203ENST00000409161 MATN2O00339 956 aa12.27□□□□□ -0.45
SHANK2-203ENST00000409161 GATBO75879 557 aaKnown RBP12.27□□□□□ -0.45
SHANK2-203ENST00000409161 ACADMP11310 421 aa12.27□□□□□ -0.45
SHANK2-203ENST00000409161 CDK9P50750 372 aaKnown RBP12.27□□□□□ -0.45
SHANK2-203ENST00000409161 PTPN11Q06124 597 aaPredicted RBP12.27□□□□□ -0.45
SHANK2-203ENST00000409161 CBFBQ13951 182 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms