RNA–Protein interactions for RNA: ENST00000408061.1

SNORD88C-201, Transcript of small nucleolar RNA, C/D box 88C, humanhuman

BASIC

Gene SNORD88C, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88C-201ENST00000408061 RIMKLBQ9ULI2 386 aa10.48□□□□□ -0.73
SNORD88C-201ENST00000408061 SOX13Q9UN79 622 aa10.48□□□□□ -0.73
SNORD88C-201ENST00000408061 SMG5Q9UPR3 1016 aaKnown RBP10.48□□□□□ -0.73
SNORD88C-201ENST00000408061 YBX2Q9Y2T7 364 aaKnown RBP10.48□□□□□ -0.73
SNORD88C-201ENST00000408061 LOC285095A0A1B0GVY8 99 aa10.47□□□□□ -0.73
SNORD88C-201ENST00000408061 POC1B-GALNT4F8VUJ3 575 aa10.47□□□□□ -0.73
SNORD88C-201ENST00000408061 RFPL2O75678 378 aa10.47□□□□□ -0.73
SNORD88C-201ENST00000408061 PAPSS2O95340 614 aaPredicted RBP10.47□□□□□ -0.73
SNORD88C-201ENST00000408061 SNRPAP09012 282 aaKnown RBP10.47□□□□□ -0.73
SNORD88C-201ENST00000408061 ALADP13716 330 aa10.47□□□□□ -0.73
SNORD88C-201ENST00000408061 HOXB8P17481 243 aaPredicted RBP10.47□□□□□ -0.73
SNORD88C-201ENST00000408061 PAMP19021 973 aa10.47□□□□□ -0.73
SNORD88C-201ENST00000408061 MGAT1P26572 445 aa10.47□□□□□ -0.73
SNORD88C-201ENST00000408061 GBP2P32456 591 aaPredicted RBP10.47□□□□□ -0.73
SNORD88C-201ENST00000408061 ACVRL1P37023 503 aa10.47□□□□□ -0.73
SNORD88C-201ENST00000408061 HADHAP40939 763 aa10.47□□□□□ -0.73
SNORD88C-201ENST00000408061 WNT3AP56704 352 aa10.47□□□□□ -0.73
SNORD88C-201ENST00000408061 SESN2P58004 480 aaPredicted RBP10.47□□□□□ -0.73
SNORD88C-201ENST00000408061 SULT2A1Q06520 285 aa10.47□□□□□ -0.73
SNORD88C-201ENST00000408061 ITKQ08881 620 aa10.47□□□□□ -0.73
SNORD88C-201ENST00000408061 MGAT5Q09328 741 aa10.47□□□□□ -0.73
SNORD88C-201ENST00000408061 CDH18Q13634 790 aa10.47□□□□□ -0.73
SNORD88C-201ENST00000408061 TERF2Q15554 542 aa10.47□□□□□ -0.73
SNORD88C-201ENST00000408061 RNF219Q5W0B1 726 aaPredicted RBP10.47□□□□□ -0.73
SNORD88C-201ENST00000408061 KDELC1Q6UW63 502 aa10.47□□□□□ -0.73
SNORD88C-201ENST00000408061 MARK2Q7KZI7 788 aaKnown RBP10.47□□□□□ -0.73
SNORD88C-201ENST00000408061 PRPF39Q86UA1 669 aaKnown RBP10.47□□□□□ -0.73
SNORD88C-201ENST00000408061 EXOC3L1Q86VI1 746 aa10.47□□□□□ -0.73
SNORD88C-201ENST00000408061 IGDCC3Q8IVU1 814 aa10.47□□□□□ -0.73
SNORD88C-201ENST00000408061 LMNTD2Q8IXW0 634 aa10.47□□□□□ -0.73
SNORD88C-201ENST00000408061 CELF5Q8N6W0 485 aaKnown RBP10.47□□□□□ -0.73
SNORD88C-201ENST00000408061 NETO2Q8NC67 525 aa10.47□□□□□ -0.73
SNORD88C-201ENST00000408061 VN1R2Q8NFZ6 395 aa10.47□□□□□ -0.73
SNORD88C-201ENST00000408061 ARRDC2Q8TBH0 407 aa10.47□□□□□ -0.73
SNORD88C-201ENST00000408061 USP33Q8TEY7 942 aa10.47□□□□□ -0.73
SNORD88C-201ENST00000408061 DDI1Q8WTU0 396 aa10.47□□□□□ -0.73
SNORD88C-201ENST00000408061 SMG7Q92540 1137 aaKnown RBP10.47□□□□□ -0.73
SNORD88C-201ENST00000408061 ZNF707Q96C28 371 aaPredicted RBP10.47□□□□□ -0.73
SNORD88C-201ENST00000408061 PAFAH2Q99487 392 aa10.47□□□□□ -0.73
SNORD88C-201ENST00000408061 C19orf43Q9BQ61 176 aa10.47□□□□□ -0.73
SNORD88C-201ENST00000408061 WDR83Q9BRX9 315 aaKnown RBP10.47□□□□□ -0.73
SNORD88C-201ENST00000408061 SPON2Q9BUD6 331 aa10.47□□□□□ -0.73
SNORD88C-201ENST00000408061 CINPQ9BW66 212 aaPredicted RBP10.47□□□□□ -0.73
SNORD88C-201ENST00000408061 CAPS2Q9BXY5 557 aa10.47□□□□□ -0.73
SNORD88C-201ENST00000408061 MUC3BQ9H195 1237 aa10.47□□□□□ -0.73
SNORD88C-201ENST00000408061 GDE1Q9NZC3 331 aa10.47□□□□□ -0.73
SNORD88C-201ENST00000408061 MARK1Q9P0L2 795 aa10.47□□□□□ -0.73
SNORD88C-201ENST00000408061 PRKAG3Q9UGI9 489 aa10.47□□□□□ -0.73
SNORD88C-201ENST00000408061 MRPS23Q9Y3D9 190 aaKnown RBP10.47□□□□□ -0.73
SNORD88C-201ENST00000408061 TTLL3Q9Y4R7 772 aa10.47□□□□□ -0.73
SNORD88C-201ENST00000408061 OR51B4Q9Y5P0 310 aa10.47□□□□□ -0.73
SNORD88C-201ENST00000408061 NOTCH4Q99466 2003 aa10.46□□□□□ -0.73
SNORD88C-201ENST00000408061 A0A0D9SEW6 157 aa10.46□□□□□ -0.73
SNORD88C-201ENST00000408061 HEATR9A2RTY3 570 aa10.46□□□□□ -0.73
SNORD88C-201ENST00000408061 CCDC85CA6NKD9 419 aa10.46□□□□□ -0.73
SNORD88C-201ENST00000408061 TSPAN3O60637 253 aa10.46□□□□□ -0.73
SNORD88C-201ENST00000408061 SHOX2O60902 331 aaPredicted RBP10.46□□□□□ -0.73
SNORD88C-201ENST00000408061 ZMPSTE24O75844 475 aa10.46□□□□□ -0.73
SNORD88C-201ENST00000408061 ARHGEF15O94989 841 aa10.46□□□□□ -0.73
SNORD88C-201ENST00000408061 PENKP01210 267 aaPredicted RBP10.46□□□□□ -0.73
SNORD88C-201ENST00000408061 FGF1P05230 155 aa10.46□□□□□ -0.73
SNORD88C-201ENST00000408061 KRT15P19012 456 aa10.46□□□□□ -0.73
SNORD88C-201ENST00000408061 GCAP28676 217 aa10.46□□□□□ -0.73
SNORD88C-201ENST00000408061 MDH1P40925 334 aaKnown RBP10.46□□□□□ -0.73
SNORD88C-201ENST00000408061 CCR2P41597 374 aa10.46□□□□□ -0.73
SNORD88C-201ENST00000408061 GRIA1P42261 906 aa10.46□□□□□ -0.73
SNORD88C-201ENST00000408061 SLCO1A2P46721 670 aa10.46□□□□□ -0.73
SNORD88C-201ENST00000408061 POLD2P49005 469 aa10.46□□□□□ -0.73
SNORD88C-201ENST00000408061 VASPP50552 380 aaPredicted RBP10.46□□□□□ -0.73
SNORD88C-201ENST00000408061 ZXDBP98169 803 aa10.46□□□□□ -0.73
SNORD88C-201ENST00000408061 USP4Q13107 963 aa10.46□□□□□ -0.73
SNORD88C-201ENST00000408061 CRYMQ14894 314 aa10.46□□□□□ -0.73
SNORD88C-201ENST00000408061 TEAD2Q15562 447 aa10.46□□□□□ -0.73
SNORD88C-201ENST00000408061 KBTBD12Q3ZCT8 623 aa10.46□□□□□ -0.73
SNORD88C-201ENST00000408061 ANKRD20A4Q4UJ75 823 aa10.46□□□□□ -0.73
SNORD88C-201ENST00000408061 HP1BP3Q5SSJ5 553 aaPredicted RBP10.46□□□□□ -0.73
SNORD88C-201ENST00000408061 PDPK2PQ6A1A2 396 aa10.46□□□□□ -0.73
SNORD88C-201ENST00000408061 FAM109BQ6ICB4 259 aaPredicted RBP10.46□□□□□ -0.73
SNORD88C-201ENST00000408061 DENND5AQ6IQ26 1287 aa10.46□□□□□ -0.73
SNORD88C-201ENST00000408061 PKN3Q6P5Z2 889 aa10.46□□□□□ -0.73
SNORD88C-201ENST00000408061 TIFABQ6ZNK6 161 aa10.46□□□□□ -0.73
SNORD88C-201ENST00000408061 GRASPQ7Z6J2 395 aaPredicted RBP10.46□□□□□ -0.73
SNORD88C-201ENST00000408061 TRABD2AQ86V40 505 aa10.46□□□□□ -0.73
SNORD88C-201ENST00000408061 CIR1Q86X95 450 aaPredicted RBP10.46□□□□□ -0.73
SNORD88C-201ENST00000408061 MFN1Q8IWA4 741 aa10.46□□□□□ -0.73
SNORD88C-201ENST00000408061 BBS7Q8IWZ6 715 aa10.46□□□□□ -0.73
SNORD88C-201ENST00000408061 AGGF1Q8N302 714 aaeCLIP10.46□□□□□ -0.73
SNORD88C-201ENST00000408061 CARNMT1Q8N4J0 409 aa10.46□□□□□ -0.73
SNORD88C-201ENST00000408061 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.46□□□□□ -0.73
SNORD88C-201ENST00000408061 PPHLN1Q8NEY8 458 aaKnown RBP10.46□□□□□ -0.73
SNORD88C-201ENST00000408061 OR7D4Q8NG98 312 aa10.46□□□□□ -0.73
SNORD88C-201ENST00000408061 DCAKDQ8WVC6 231 aa10.46□□□□□ -0.73
SNORD88C-201ENST00000408061 SCG3Q8WXD2 468 aaKnown RBP10.46□□□□□ -0.73
SNORD88C-201ENST00000408061 WBP2Q969T9 261 aa10.46□□□□□ -0.73
SNORD88C-201ENST00000408061 ISG20Q96AZ6 181 aaKnown RBP10.46□□□□□ -0.73
SNORD88C-201ENST00000408061 MYEOVQ96EZ4 313 aa10.46□□□□□ -0.73
SNORD88C-201ENST00000408061 ALG14Q96F25 216 aa10.46□□□□□ -0.73
SNORD88C-201ENST00000408061 IFT43Q96FT9 208 aa10.46□□□□□ -0.73
SNORD88C-201ENST00000408061 CFAP36Q96G28 342 aa10.46□□□□□ -0.73
SNORD88C-201ENST00000408061 SGSM3Q96HU1 749 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms