RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 CATSPERZQ9NTU4 200 aa13.11□□□□□ -0.31
RNF43-201ENST00000407977 MAGEL2Q9UJ55 1249 aa13.11□□□□□ -0.31
RNF43-201ENST00000407977 FAM47E-STBD1D6RA91 191 aa13.11□□□□□ -0.31
RNF43-201ENST00000407977 MATN2O00339 956 aa13.11□□□□□ -0.31
RNF43-201ENST00000407977 STK25O00506 426 aa13.11□□□□□ -0.31
RNF43-201ENST00000407977 ZBTB14O43829 449 aa13.11□□□□□ -0.31
RNF43-201ENST00000407977 GLRA2P23416 452 aa13.11□□□□□ -0.31
RNF43-201ENST00000407977 PLK1P53350 603 aa13.11□□□□□ -0.31
RNF43-201ENST00000407977 TAF1CQ15572 869 aaPredicted RBP13.11□□□□□ -0.31
RNF43-201ENST00000407977 UNC5AQ6ZN44 842 aa13.11□□□□□ -0.31
RNF43-201ENST00000407977 HIPK1Q86Z02 1210 aa13.11□□□□□ -0.31
RNF43-201ENST00000407977 BTBD9Q96Q07 612 aa13.11□□□□□ -0.31
RNF43-201ENST00000407977 SLC38A2Q96QD8 506 aa13.11□□□□□ -0.31
RNF43-201ENST00000407977 TMEM109Q9BVC6 243 aa13.11□□□□□ -0.31
RNF43-201ENST00000407977 CEP41Q9BYV8 373 aa13.11□□□□□ -0.31
RNF43-201ENST00000407977 DDX43Q9NXZ2 648 aaKnown RBP13.11□□□□□ -0.31
RNF43-201ENST00000407977 STOML2Q9UJZ1 356 aa13.11□□□□□ -0.31
RNF43-201ENST00000407977 TM7SF2O76062 418 aa13.11□□□□□ -0.31
RNF43-201ENST00000407977 CAPGP40121 348 aa13.11□□□□□ -0.31
RNF43-201ENST00000407977 ALDH9A1P49189 494 aa13.11□□□□□ -0.31
RNF43-201ENST00000407977 STARD3Q14849 445 aa13.11□□□□□ -0.31
RNF43-201ENST00000407977 C5orf22Q49AR2 442 aa13.11□□□□□ -0.31
RNF43-201ENST00000407977 ANGEL2Q5VTE6 544 aaKnown RBP13.11□□□□□ -0.31
RNF43-201ENST00000407977 METTL21CQ5VZV1 264 aa13.11□□□□□ -0.31
RNF43-201ENST00000407977 FAM180AQ6UWF9 173 aa13.11□□□□□ -0.31
RNF43-201ENST00000407977 CLNKQ7Z7G1 428 aa13.11□□□□□ -0.31
RNF43-201ENST00000407977 UNC93AQ86WB7 457 aa13.11□□□□□ -0.31
RNF43-201ENST00000407977 LENG9Q96B70 501 aa13.11□□□□□ -0.31
RNF43-201ENST00000407977 SERAC1Q96JX3 654 aa13.11□□□□□ -0.31
RNF43-201ENST00000407977 ZNF670Q9BS34 389 aa13.11□□□□□ -0.31
RNF43-201ENST00000407977 TMEM39BQ9GZU3 492 aa13.11□□□□□ -0.31
RNF43-201ENST00000407977 AAASQ9NRG9 546 aa13.11□□□□□ -0.31
RNF43-201ENST00000407977 GSAPA4D1B5 854 aa13.11□□□□□ -0.31
RNF43-201ENST00000407977 BTN3A3O00478 584 aa13.11□□□□□ -0.31
RNF43-201ENST00000407977 FARP2O94887 1054 aaPredicted RBP13.11□□□□□ -0.31
RNF43-201ENST00000407977 OR6B1O95007 311 aa13.11□□□□□ -0.31
RNF43-201ENST00000407977 LTFP02788 710 aa13.11□□□□□ -0.31
RNF43-201ENST00000407977 CETPP11597 493 aa13.11□□□□□ -0.31
RNF43-201ENST00000407977 AXLP30530 894 aa13.11□□□□□ -0.31
RNF43-201ENST00000407977 NOS2P35228 1153 aa13.11□□□□□ -0.31
RNF43-201ENST00000407977 CTXN3Q4LDR2 81 aa13.11□□□□□ -0.31
RNF43-201ENST00000407977 C3orf67Q6ZVT6 689 aa13.11□□□□□ -0.31
RNF43-201ENST00000407977 RASGEF1CQ8N431 466 aa13.11□□□□□ -0.31
RNF43-201ENST00000407977 ZNF513Q8N8E2 541 aaPredicted RBP13.11□□□□□ -0.31
RNF43-201ENST00000407977 RCN3Q96D15 328 aa13.11□□□□□ -0.31
RNF43-201ENST00000407977 POLR1EQ9GZS1 481 aaKnown RBP13.11□□□□□ -0.31
RNF43-201ENST00000407977 PNPLA8Q9NP80 782 aa13.11□□□□□ -0.31
RNF43-201ENST00000407977 IRGMA1A4Y4 181 aa13.1□□□□□ -0.31
RNF43-201ENST00000407977 MTRF1O75570 445 aaKnown RBP13.1□□□□□ -0.31
RNF43-201ENST00000407977 TRMUO75648 421 aaKnown RBP13.1□□□□□ -0.31
RNF43-201ENST00000407977 RAB10P61026 200 aa13.1□□□□□ -0.31
RNF43-201ENST00000407977 CDH19Q9H159 772 aa13.1□□□□□ -0.31
RNF43-201ENST00000407977 CAPN10Q9HC96 672 aa13.1□□□□□ -0.31
RNF43-201ENST00000407977 MKL2Q9ULH7 1088 aa13.1□□□□□ -0.31
RNF43-201ENST00000407977 SSR3Q9UNL2 185 aa13.1□□□□□ -0.31
RNF43-201ENST00000407977 NADKO95544 446 aaPredicted RBP13.1□□□□□ -0.31
RNF43-201ENST00000407977 ITGA2BP08514 1039 aa13.1□□□□□ -0.31
RNF43-201ENST00000407977 PPIBP23284 216 aaKnown RBP13.1□□□□□ -0.31
RNF43-201ENST00000407977 FSCN1Q16658 493 aaKnown RBP13.1□□□□□ -0.31
RNF43-201ENST00000407977 GNASQ5JWF2 1037 aa13.1□□□□□ -0.31
RNF43-201ENST00000407977 LNX1Q8TBB1 728 aaPredicted RBP13.1□□□□□ -0.31
RNF43-201ENST00000407977 ACER1Q8TDN7 264 aa13.1□□□□□ -0.31
RNF43-201ENST00000407977 COX4I2Q96KJ9 171 aa13.1□□□□□ -0.31
RNF43-201ENST00000407977 RNF157Q96PX1 679 aa13.1□□□□□ -0.31
RNF43-201ENST00000407977 MYOZ2Q9NPC6 264 aa13.1□□□□□ -0.31
RNF43-201ENST00000407977 SLCO1B3Q9NPD5 702 aa13.1□□□□□ -0.31
RNF43-201ENST00000407977 ZNF112Q9UJU3 913 aa13.1□□□□□ -0.31
RNF43-201ENST00000407977 SYNPO2Q9UMS6 1093 aa13.1□□□□□ -0.31
RNF43-201ENST00000407977 A0A087WZ62 844 aa13.1□□□□□ -0.31
RNF43-201ENST00000407977 SLC28A1O00337 649 aa13.1□□□□□ -0.31
RNF43-201ENST00000407977 SGTAO43765 313 aa13.1□□□□□ -0.31
RNF43-201ENST00000407977 CST1P01037 141 aa13.1□□□□□ -0.31
RNF43-201ENST00000407977 ANXA5P08758 320 aa13.1□□□□□ -0.31
RNF43-201ENST00000407977 UBAP2LQ14157 1087 aaKnown RBP13.1□□□□□ -0.31
RNF43-201ENST00000407977 CYP2A13Q16696 494 aa13.1□□□□□ -0.31
RNF43-201ENST00000407977 PFKFB4Q16877 469 aa13.1□□□□□ -0.31
RNF43-201ENST00000407977 STXBP5Q5T5C0 1151 aa13.1□□□□□ -0.31
RNF43-201ENST00000407977 ANKRD13AQ8IZ07 590 aa13.1□□□□□ -0.31
RNF43-201ENST00000407977 PTGR2Q8N8N7 351 aaPredicted RBP13.1□□□□□ -0.31
RNF43-201ENST00000407977 SHC3Q92529 594 aa13.1□□□□□ -0.31
RNF43-201ENST00000407977 VPS35Q96QK1 796 aa13.1□□□□□ -0.31
RNF43-201ENST00000407977 BBS4Q96RK4 519 aa13.1□□□□□ -0.31
RNF43-201ENST00000407977 ELOVL4Q9GZR5 314 aa13.1□□□□□ -0.31
RNF43-201ENST00000407977 DEFB129Q9H1M3 183 aa13.1□□□□□ -0.31
RNF43-201ENST00000407977 ALG9Q9H6U8 611 aa13.1□□□□□ -0.31
RNF43-201ENST00000407977 VPS45Q9NRW7 570 aa13.1□□□□□ -0.31
RNF43-201ENST00000407977 CIDEBQ9UHD4 219 aa13.1□□□□□ -0.31
RNF43-201ENST00000407977 NKRFO15226 690 aaKnown RBP eCLIP13.1□□□□□ -0.31
RNF43-201ENST00000407977 RNASEH1O60930 286 aaKnown RBP13.1□□□□□ -0.31
RNF43-201ENST00000407977 HOXC6P09630 235 aa13.1□□□□□ -0.31
RNF43-201ENST00000407977 CCDC166P0CW27 439 aa13.1□□□□□ -0.31
RNF43-201ENST00000407977 OR1E1P30953 314 aa13.1□□□□□ -0.31
RNF43-201ENST00000407977 ZIK1Q3SY52 487 aaPredicted RBP13.1□□□□□ -0.31
RNF43-201ENST00000407977 PYDC2Q56P42 97 aa13.1□□□□□ -0.31
RNF43-201ENST00000407977 KLHL23Q8NBE8 558 aa13.1□□□□□ -0.31
RNF43-201ENST00000407977 ATL1Q8WXF7 558 aa13.1□□□□□ -0.31
RNF43-201ENST00000407977 WNT8BQ93098 351 aa13.1□□□□□ -0.31
RNF43-201ENST00000407977 PPP1R14AQ96A00 147 aa13.1□□□□□ -0.31
RNF43-201ENST00000407977 TMEM169Q96HH4 297 aa13.1□□□□□ -0.31
RNF43-201ENST00000407977 SAE1Q9UBE0 346 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms