RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 STXBP5Q5T5C0 1151 aa13.16□□□□□ -0.3
SMARCB1-203ENST00000407082 ITPRIPL1Q6GPH6 555 aa13.16□□□□□ -0.3
SMARCB1-203ENST00000407082 ZNF852Q6ZMS4 543 aa13.16□□□□□ -0.3
SMARCB1-203ENST00000407082 CLEC20AQ6ZU45 233 aa13.16□□□□□ -0.3
SMARCB1-203ENST00000407082 BNIPLQ7Z465 357 aa13.16□□□□□ -0.3
SMARCB1-203ENST00000407082 TCEAL8Q8IYN2 117 aa13.16□□□□□ -0.3
SMARCB1-203ENST00000407082 ITFG1Q8TB96 612 aa13.16□□□□□ -0.3
SMARCB1-203ENST00000407082 SLC7A14Q8TBB6 771 aa13.16□□□□□ -0.3
SMARCB1-203ENST00000407082 CCDC110Q8TBZ0 833 aa13.16□□□□□ -0.3
SMARCB1-203ENST00000407082 MAGEC3Q8TD91 643 aa13.16□□□□□ -0.3
SMARCB1-203ENST00000407082 ACMSDQ8TDX5 336 aa13.16□□□□□ -0.3
SMARCB1-203ENST00000407082 ATP2A3Q93084 1043 aa13.16□□□□□ -0.3
SMARCB1-203ENST00000407082 MYLPFQ96A32 169 aa13.16□□□□□ -0.3
SMARCB1-203ENST00000407082 TTC17Q96AE7 1141 aa13.16□□□□□ -0.3
SMARCB1-203ENST00000407082 MRRFQ96E11 262 aaKnown RBP13.16□□□□□ -0.3
SMARCB1-203ENST00000407082 FUBP3Q96I24 572 aaKnown RBP eCLIP13.16□□□□□ -0.3
SMARCB1-203ENST00000407082 OLFM3Q96PB7 478 aa13.16□□□□□ -0.3
SMARCB1-203ENST00000407082 SEPT5Q99719 369 aaPredicted RBP13.16□□□□□ -0.3
SMARCB1-203ENST00000407082 EPAS1Q99814 870 aa13.16□□□□□ -0.3
SMARCB1-203ENST00000407082 TRIM55Q9BYV6 548 aa13.16□□□□□ -0.3
SMARCB1-203ENST00000407082 CRISPLD1Q9H336 500 aa13.16□□□□□ -0.3
SMARCB1-203ENST00000407082 MANSC1Q9H8J5 431 aa13.16□□□□□ -0.3
SMARCB1-203ENST00000407082 DTLQ9NZJ0 730 aa13.16□□□□□ -0.3
SMARCB1-203ENST00000407082 TRHDEQ9UKU6 1024 aa13.16□□□□□ -0.3
SMARCB1-203ENST00000407082 MRPS17Q9Y2R5 130 aaKnown RBP13.16□□□□□ -0.3
SMARCB1-203ENST00000407082 DOCK6Q96HP0 2047 aa13.16□□□□□ -0.3
SMARCB1-203ENST00000407082 MAGEB16A2A368 324 aa13.15□□□□□ -0.3
SMARCB1-203ENST00000407082 KLF11O14901 512 aa13.15□□□□□ -0.3
SMARCB1-203ENST00000407082 CHUKO15111 745 aa13.15□□□□□ -0.3
SMARCB1-203ENST00000407082 BANF1O75531 89 aa13.15□□□□□ -0.3
SMARCB1-203ENST00000407082 SOAT2O75908 522 aa13.15□□□□□ -0.3
SMARCB1-203ENST00000407082 LTFP02788 710 aa13.15□□□□□ -0.3
SMARCB1-203ENST00000407082 C8AP07357 584 aa13.15□□□□□ -0.3
SMARCB1-203ENST00000407082 GOT1P17174 413 aa13.15□□□□□ -0.3
SMARCB1-203ENST00000407082 ADRA1BP35368 520 aa13.15□□□□□ -0.3
SMARCB1-203ENST00000407082 GARSP41250 739 aaKnown RBP13.15□□□□□ -0.3
SMARCB1-203ENST00000407082 TUFMP49411 452 aaKnown RBP13.15□□□□□ -0.3
SMARCB1-203ENST00000407082 NRLP54845 237 aa13.15□□□□□ -0.3
SMARCB1-203ENST00000407082 MAP3K7CLP57077 242 aa13.15□□□□□ -0.3
SMARCB1-203ENST00000407082 CDK18Q07002 472 aa13.15□□□□□ -0.3
SMARCB1-203ENST00000407082 RIPK1Q13546 671 aa13.15□□□□□ -0.3
SMARCB1-203ENST00000407082 PRKD1Q15139 912 aaPredicted RBP13.15□□□□□ -0.3
SMARCB1-203ENST00000407082 SLC1A5Q15758 541 aa13.15□□□□□ -0.3
SMARCB1-203ENST00000407082 ZKSCAN8Q15776 578 aaPredicted RBP13.15□□□□□ -0.3
SMARCB1-203ENST00000407082 RAB41Q5JT25 222 aa13.15□□□□□ -0.3
SMARCB1-203ENST00000407082 IL31Q6EBC2 164 aa13.15□□□□□ -0.3
SMARCB1-203ENST00000407082 LAIR1Q6GTX8 287 aa13.15□□□□□ -0.3
SMARCB1-203ENST00000407082 TIFABQ6ZNK6 161 aa13.15□□□□□ -0.3
SMARCB1-203ENST00000407082 RTL10Q7L3V2 364 aa13.15□□□□□ -0.3
SMARCB1-203ENST00000407082 FAM35AQ86V20 835 aa13.15□□□□□ -0.3
SMARCB1-203ENST00000407082 CAND1Q86VP6 1230 aaKnown RBP13.15□□□□□ -0.3
SMARCB1-203ENST00000407082 FAM131BQ86XD5 332 aa13.15□□□□□ -0.3
SMARCB1-203ENST00000407082 PARP9Q8IXQ6 854 aa13.15□□□□□ -0.3
SMARCB1-203ENST00000407082 TAB3Q8N5C8 712 aaPredicted RBP13.15□□□□□ -0.3
SMARCB1-203ENST00000407082 TTC9BQ8N6N2 239 aa13.15□□□□□ -0.3
SMARCB1-203ENST00000407082 CCDC185Q8N715 623 aa13.15□□□□□ -0.3
SMARCB1-203ENST00000407082 PPM1NQ8N819 430 aa13.15□□□□□ -0.3
SMARCB1-203ENST00000407082 TCP10LQ8TDR4 215 aa13.15□□□□□ -0.3
SMARCB1-203ENST00000407082 CLEC4CQ8WTT0 213 aa13.15□□□□□ -0.3
SMARCB1-203ENST00000407082 MZB1Q8WU39 189 aa13.15□□□□□ -0.3
SMARCB1-203ENST00000407082 ING5Q8WYH8 240 aa13.15□□□□□ -0.3
SMARCB1-203ENST00000407082 CLDN23Q96B33 292 aa13.15□□□□□ -0.3
SMARCB1-203ENST00000407082 STAMBPL1Q96FJ0 436 aa13.15□□□□□ -0.3
SMARCB1-203ENST00000407082 LRRC37BQ96QE4 947 aa13.15□□□□□ -0.3
SMARCB1-203ENST00000407082 FAM126AQ9BYI3 521 aaPredicted RBP13.15□□□□□ -0.3
SMARCB1-203ENST00000407082 ECT2Q9H8V3 914 aa13.15□□□□□ -0.3
SMARCB1-203ENST00000407082 ARHGEF4Q9NR80 690 aa13.15□□□□□ -0.3
SMARCB1-203ENST00000407082 HEBP1Q9NRV9 189 aa13.15□□□□□ -0.3
SMARCB1-203ENST00000407082 KRT82Q9NSB4 513 aa13.15□□□□□ -0.3
SMARCB1-203ENST00000407082 SEMA4GQ9NTN9 838 aa13.15□□□□□ -0.3
SMARCB1-203ENST00000407082 HSFX1Q9UBD0 423 aa13.15□□□□□ -0.3
SMARCB1-203ENST00000407082 TTLL3Q9Y4R7 772 aa13.15□□□□□ -0.3
SMARCB1-203ENST00000407082 MAD1L1Q9Y6D9 718 aa13.15□□□□□ -0.3
SMARCB1-203ENST00000407082 USP3Q9Y6I4 520 aa13.15□□□□□ -0.3
SMARCB1-203ENST00000407082 ZFHX4Q86UP3 3567 aa13.14□□□□□ -0.31
SMARCB1-203ENST00000407082 MTCL1Q9Y4B5 1905 aaKnown RBP13.14□□□□□ -0.31
SMARCB1-203ENST00000407082 FAM159BA6NKW6 160 aa13.14□□□□□ -0.31
SMARCB1-203ENST00000407082 XYLBO75191 536 aa13.14□□□□□ -0.31
SMARCB1-203ENST00000407082 UBOX5O94941 541 aa13.14□□□□□ -0.31
SMARCB1-203ENST00000407082 RETP07949 1114 aa13.14□□□□□ -0.31
SMARCB1-203ENST00000407082 HAPLN1P10915 354 aaPredicted RBP13.14□□□□□ -0.31
SMARCB1-203ENST00000407082 PGAM1P18669 254 aa13.14□□□□□ -0.31
SMARCB1-203ENST00000407082 GRIK1P39086 918 aa13.14□□□□□ -0.31
SMARCB1-203ENST00000407082 RPS9P46781 194 aaKnown RBP13.14□□□□□ -0.31
SMARCB1-203ENST00000407082 ALDH1A3P47895 512 aa13.14□□□□□ -0.31
SMARCB1-203ENST00000407082 NEK3P51956 506 aa13.14□□□□□ -0.31
SMARCB1-203ENST00000407082 TPI1P60174 286 aa13.14□□□□□ -0.31
SMARCB1-203ENST00000407082 GBE1Q04446 702 aa13.14□□□□□ -0.31
SMARCB1-203ENST00000407082 GAD2Q05329 585 aa13.14□□□□□ -0.31
SMARCB1-203ENST00000407082 AP1B1Q10567 949 aa13.14□□□□□ -0.31
SMARCB1-203ENST00000407082 TWF1Q12792 350 aa13.14□□□□□ -0.31
SMARCB1-203ENST00000407082 SIM2Q14190 667 aaPredicted RBP13.14□□□□□ -0.31
SMARCB1-203ENST00000407082 PRPSAP1Q14558 356 aa13.14□□□□□ -0.31
SMARCB1-203ENST00000407082 PPP2R5DQ14738 602 aa13.14□□□□□ -0.31
SMARCB1-203ENST00000407082 RAB6CQ53S08 254 aa13.14□□□□□ -0.31
SMARCB1-203ENST00000407082 FAM133BQ5BKY9 247 aaKnown RBP13.14□□□□□ -0.31
SMARCB1-203ENST00000407082 STEAP4Q687X5 459 aa13.14□□□□□ -0.31
SMARCB1-203ENST00000407082 RFX8Q6ZV50 586 aa13.14□□□□□ -0.31
SMARCB1-203ENST00000407082 PAQR9Q6ZVX9 377 aa13.14□□□□□ -0.31
SMARCB1-203ENST00000407082 SCN4BQ8IWT1 228 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms