RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 IRX6P78412 446 aaPredicted RBP5.05□□□□□ -1.6
HMGB3P18-201ENST00000406327 DUSP28Q4G0W2 176 aa5.05□□□□□ -1.6
HMGB3P18-201ENST00000406327 ZNF667Q5HYK9 610 aa5.05□□□□□ -1.6
HMGB3P18-201ENST00000406327 PLEKHS1Q5SXH7 462 aa5.05□□□□□ -1.6
HMGB3P18-201ENST00000406327 TSTD2Q5T7W7 516 aa5.05□□□□□ -1.6
HMGB3P18-201ENST00000406327 ZKSCAN2Q63HK3 967 aa5.05□□□□□ -1.6
HMGB3P18-201ENST00000406327 NAPEPLDQ6IQ20 393 aa5.05□□□□□ -1.6
HMGB3P18-201ENST00000406327 KRT77Q7Z794 578 aa5.05□□□□□ -1.6
HMGB3P18-201ENST00000406327 FAM160B2Q86V87 743 aa5.05□□□□□ -1.6
HMGB3P18-201ENST00000406327 PLD5Q8N7P1 536 aa5.05□□□□□ -1.6
HMGB3P18-201ENST00000406327 FAM110DQ8TAY7 271 aaPredicted RBP5.05□□□□□ -1.6
HMGB3P18-201ENST00000406327 JAKMIP2Q96AA8 810 aa5.05□□□□□ -1.6
HMGB3P18-201ENST00000406327 SLC32A1Q9H598 525 aa5.05□□□□□ -1.6
HMGB3P18-201ENST00000406327 KAT14Q9H8E8 782 aa5.05□□□□□ -1.6
HMGB3P18-201ENST00000406327 Q9N2J8 555 aa5.05□□□□□ -1.6
HMGB3P18-201ENST00000406327 PCDHB16Q9NRJ7 776 aa5.05□□□□□ -1.6
HMGB3P18-201ENST00000406327 PLSCR4Q9NRQ2 329 aa5.05□□□□□ -1.6
HMGB3P18-201ENST00000406327 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.05□□□□□ -1.6
HMGB3P18-201ENST00000406327 SLCO3A1Q9UIG8 710 aa5.05□□□□□ -1.6
HMGB3P18-201ENST00000406327 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.05□□□□□ -1.6
HMGB3P18-201ENST00000406327 ERCC6Q03468 1493 aa5.05□□□□□ -1.6
HMGB3P18-201ENST00000406327 MYOM3Q5VTT5 1437 aa5.05□□□□□ -1.6
HMGB3P18-201ENST00000406327 KAT6BQ8WYB5 2073 aa5.04□□□□□ -1.6
HMGB3P18-201ENST00000406327 UGGT2Q9NYU1 1516 aa5.04□□□□□ -1.6
HMGB3P18-201ENST00000406327 A0A1W2PRG0 241 aa5.04□□□□□ -1.6
HMGB3P18-201ENST00000406327 TCRBV5S1A1TA0A578 114 aa5.04□□□□□ -1.6
HMGB3P18-201ENST00000406327 MSI1O43347 362 aaKnown RBP5.04□□□□□ -1.6
HMGB3P18-201ENST00000406327 TACC1O75410 805 aa5.04□□□□□ -1.6
HMGB3P18-201ENST00000406327 LCKP06239 509 aa5.04□□□□□ -1.6
HMGB3P18-201ENST00000406327 FCGR2AP12318 317 aa5.04□□□□□ -1.6
HMGB3P18-201ENST00000406327 AKR1B1P15121 316 aa5.04□□□□□ -1.6
HMGB3P18-201ENST00000406327 PTGER1P34995 402 aa5.04□□□□□ -1.6
HMGB3P18-201ENST00000406327 ACTN2P35609 894 aa5.04□□□□□ -1.6
HMGB3P18-201ENST00000406327 RARRES1P49788 294 aa5.04□□□□□ -1.6
HMGB3P18-201ENST00000406327 DGCR2P98153 550 aa5.04□□□□□ -1.6
HMGB3P18-201ENST00000406327 RHAGQ02094 409 aa5.04□□□□□ -1.6
HMGB3P18-201ENST00000406327 ABHD18Q0P651 414 aa5.04□□□□□ -1.6
HMGB3P18-201ENST00000406327 TMEM115Q12893 351 aaPredicted RBP5.04□□□□□ -1.6
HMGB3P18-201ENST00000406327 GALNT3Q14435 633 aa5.04□□□□□ -1.6
HMGB3P18-201ENST00000406327 PUM1Q14671 1186 aaKnown RBP eCLIP5.04□□□□□ -1.6
HMGB3P18-201ENST00000406327 TAF11Q15544 211 aa5.04□□□□□ -1.6
HMGB3P18-201ENST00000406327 CCDC96Q2M329 555 aa5.04□□□□□ -1.6
HMGB3P18-201ENST00000406327 ZXDCQ2QGD7 858 aaPredicted RBP5.04□□□□□ -1.6
HMGB3P18-201ENST00000406327 PLK5Q496M5 336 aa5.04□□□□□ -1.6
HMGB3P18-201ENST00000406327 SERTAD4-AS1Q5TG53 156 aa5.04□□□□□ -1.6
HMGB3P18-201ENST00000406327 SUMO4Q6EEV6 95 aa5.04□□□□□ -1.6
HMGB3P18-201ENST00000406327 LRIG3Q6UXM1 1119 aa5.04□□□□□ -1.6
HMGB3P18-201ENST00000406327 PRSS45Q7RTY3 260 aa5.04□□□□□ -1.6
HMGB3P18-201ENST00000406327 SZRD1Q7Z422 152 aa5.04□□□□□ -1.6
HMGB3P18-201ENST00000406327 IGFN1Q86VF2 1251 aa5.04□□□□□ -1.6
HMGB3P18-201ENST00000406327 RHPN2Q8IUC4 686 aa5.04□□□□□ -1.6
HMGB3P18-201ENST00000406327 TICAM1Q8IUC6 712 aa5.04□□□□□ -1.6
HMGB3P18-201ENST00000406327 EXD3Q8N9H8 876 aa5.04□□□□□ -1.6
HMGB3P18-201ENST00000406327 SH3RF3Q8TEJ3 882 aaPredicted RBP5.04□□□□□ -1.6
HMGB3P18-201ENST00000406327 PIGKQ92643 395 aa5.04□□□□□ -1.6
HMGB3P18-201ENST00000406327 UROC1Q96N76 676 aa5.04□□□□□ -1.6
HMGB3P18-201ENST00000406327 ZNF347Q96SE7 839 aa5.04□□□□□ -1.6
HMGB3P18-201ENST00000406327 TIMP4Q99727 224 aa5.04□□□□□ -1.6
HMGB3P18-201ENST00000406327 NCAPGQ9BPX3 1015 aa5.04□□□□□ -1.6
HMGB3P18-201ENST00000406327 MACROD1Q9BQ69 325 aa5.04□□□□□ -1.6
HMGB3P18-201ENST00000406327 SLF1Q9BQI6 1058 aa5.04□□□□□ -1.6
HMGB3P18-201ENST00000406327 STRA6Q9BX79 667 aa5.04□□□□□ -1.6
HMGB3P18-201ENST00000406327 TOR3AQ9H497 397 aa5.04□□□□□ -1.6
HMGB3P18-201ENST00000406327 MMRN2Q9H8L6 949 aa5.04□□□□□ -1.6
HMGB3P18-201ENST00000406327 C20orf141Q9NUB4 165 aa5.04□□□□□ -1.6
HMGB3P18-201ENST00000406327 GRHL1Q9NZI5 618 aa5.04□□□□□ -1.6
HMGB3P18-201ENST00000406327 NCKIPSDQ9NZQ3 722 aa5.04□□□□□ -1.6
HMGB3P18-201ENST00000406327 SH3BP4Q9P0V3 963 aa5.04□□□□□ -1.6
HMGB3P18-201ENST00000406327 HDAC6Q9UBN7 1215 aa5.04□□□□□ -1.6
HMGB3P18-201ENST00000406327 CORO1CQ9ULV4 474 aaPredicted RBP5.04□□□□□ -1.6
HMGB3P18-201ENST00000406327 NCOA2Q15596 1464 aa5.04□□□□□ -1.6
HMGB3P18-201ENST00000406327 CCDC18Q5T9S5 1454 aa5.04□□□□□ -1.6
HMGB3P18-201ENST00000406327 CFAP43Q8NDM7 1665 aa5.04□□□□□ -1.6
HMGB3P18-201ENST00000406327 ADAMTS12P58397 1594 aa5.04□□□□□ -1.6
HMGB3P18-201ENST00000406327 IQGAP2Q13576 1575 aa5.04□□□□□ -1.6
HMGB3P18-201ENST00000406327 THOC2Q8NI27 1593 aaKnown RBP5.04□□□□□ -1.6
HMGB3P18-201ENST00000406327 CTTNBP2Q8WZ74 1663 aa5.03□□□□□ -1.6
HMGB3P18-201ENST00000406327 GRID2IPA4D2P6 1211 aa5.03□□□□□ -1.6
HMGB3P18-201ENST00000406327 PABPN1LA6NDY0 278 aaKnown RBP5.03□□□□□ -1.6
HMGB3P18-201ENST00000406327 AGAP14A8MT82 685 aa5.03□□□□□ -1.6
HMGB3P18-201ENST00000406327 C17orf100A8MU93 164 aa5.03□□□□□ -1.6
HMGB3P18-201ENST00000406327 HOXB5P09067 269 aa5.03□□□□□ -1.6
HMGB3P18-201ENST00000406327 TFEBP19484 476 aa5.03□□□□□ -1.6
HMGB3P18-201ENST00000406327 MAPK4P31152 587 aa5.03□□□□□ -1.6
HMGB3P18-201ENST00000406327 MCM7P33993 719 aa5.03□□□□□ -1.6
HMGB3P18-201ENST00000406327 SLC12A2P55011 1212 aa5.03□□□□□ -1.6
HMGB3P18-201ENST00000406327 CYP4A11Q02928 519 aa5.03□□□□□ -1.6
HMGB3P18-201ENST00000406327 FOXI1Q12951 378 aa5.03□□□□□ -1.6
HMGB3P18-201ENST00000406327 RPE65Q16518 533 aa5.03□□□□□ -1.6
HMGB3P18-201ENST00000406327 HIST2H2ACQ16777 129 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P18-201ENST00000406327 ARL13AQ5H913 290 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P18-201ENST00000406327 HECTD2Q5U5R9 776 aa5.03□□□□□ -1.6
HMGB3P18-201ENST00000406327 FNDC7Q5VTL7 733 aa5.03□□□□□ -1.6
HMGB3P18-201ENST00000406327 SLC30A6Q6NXT4 461 aa5.03□□□□□ -1.6
HMGB3P18-201ENST00000406327 PDXDC1Q6P996 788 aa5.03□□□□□ -1.6
HMGB3P18-201ENST00000406327 RBM44Q6ZP01 1051 aaKnown RBP5.03□□□□□ -1.6
HMGB3P18-201ENST00000406327 FAM83HQ6ZRV2 1179 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P18-201ENST00000406327 PRPF39Q86UA1 669 aaKnown RBP5.03□□□□□ -1.6
HMGB3P18-201ENST00000406327 ARHGAP12Q8IWW6 846 aa5.03□□□□□ -1.6
HMGB3P18-201ENST00000406327 ADGRF2Q8IZF7 708 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms