RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 SCFD2Q8WU76 684 aa5.26□□□□□ -1.57
HMGB1P13-201ENST00000406019 CNOT9Q92600 299 aaKnown RBP5.26□□□□□ -1.57
HMGB1P13-201ENST00000406019 KLHL29Q96CT2 875 aa5.26□□□□□ -1.57
HMGB1P13-201ENST00000406019 ZNF845Q96IR2 970 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P13-201ENST00000406019 FEM1CQ96JP0 617 aa5.26□□□□□ -1.57
HMGB1P13-201ENST00000406019 HSPB7Q9UBY9 170 aa5.26□□□□□ -1.57
HMGB1P13-201ENST00000406019 ZNF215Q9UL58 517 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P13-201ENST00000406019 CORO1CQ9ULV4 474 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P13-201ENST00000406019 NOL7Q9UMY1 257 aaKnown RBP5.26□□□□□ -1.57
HMGB1P13-201ENST00000406019 KCNE2Q9Y6J6 123 aa5.26□□□□□ -1.57
HMGB1P13-201ENST00000406019 CYP2D7A0A087X1C5 515 aa5.25□□□□□ -1.57
HMGB1P13-201ENST00000406019 C16orf96A6NNT2 1141 aa5.25□□□□□ -1.57
HMGB1P13-201ENST00000406019 DSCR3O14972 297 aa5.25□□□□□ -1.57
HMGB1P13-201ENST00000406019 CCNT1O60563 726 aaKnown RBP5.25□□□□□ -1.57
HMGB1P13-201ENST00000406019 DKC1O60832 514 aaKnown RBP eCLIP5.25□□□□□ -1.57
HMGB1P13-201ENST00000406019 ERAL1O75616 437 aaKnown RBP5.25□□□□□ -1.57
HMGB1P13-201ENST00000406019 KELP23276 732 aa5.25□□□□□ -1.57
HMGB1P13-201ENST00000406019 NFKBIAP25963 317 aa5.25□□□□□ -1.57
HMGB1P13-201ENST00000406019 GARSP41250 739 aaKnown RBP5.25□□□□□ -1.57
HMGB1P13-201ENST00000406019 COPB1P53618 953 aaKnown RBP5.25□□□□□ -1.57
HMGB1P13-201ENST00000406019 KRTAP10-11P60412 298 aa5.25□□□□□ -1.57
HMGB1P13-201ENST00000406019 WDR5P61964 334 aaKnown RBP5.25□□□□□ -1.57
HMGB1P13-201ENST00000406019 ROR1Q01973 937 aa5.25□□□□□ -1.57
HMGB1P13-201ENST00000406019 TMEM115Q12893 351 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P13-201ENST00000406019 KLF9Q13886 244 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P13-201ENST00000406019 AP5B1Q2VPB7 878 aa5.25□□□□□ -1.57
HMGB1P13-201ENST00000406019 MTX3Q5HYI7 312 aa5.25□□□□□ -1.57
HMGB1P13-201ENST00000406019 SLC30A6Q6NXT4 461 aa5.25□□□□□ -1.57
HMGB1P13-201ENST00000406019 RPUSD3Q6P087 351 aaKnown RBP5.25□□□□□ -1.57
HMGB1P13-201ENST00000406019 TMEM81Q6P7N7 255 aa5.25□□□□□ -1.57
HMGB1P13-201ENST00000406019 CYP20A1Q6UW02 462 aa5.25□□□□□ -1.57
HMGB1P13-201ENST00000406019 PRPF39Q86UA1 669 aaKnown RBP5.25□□□□□ -1.57
HMGB1P13-201ENST00000406019 VPS52Q8N1B4 723 aa5.25□□□□□ -1.57
HMGB1P13-201ENST00000406019 SRBD1Q8N5C6 995 aaKnown RBP5.25□□□□□ -1.57
HMGB1P13-201ENST00000406019 SETD9Q8NE22 299 aa5.25□□□□□ -1.57
HMGB1P13-201ENST00000406019 NOC3LQ8WTT2 800 aaKnown RBP5.25□□□□□ -1.57
HMGB1P13-201ENST00000406019 TTC14Q96N46 770 aa5.25□□□□□ -1.57
HMGB1P13-201ENST00000406019 GPR78Q96P69 363 aa5.25□□□□□ -1.57
HMGB1P13-201ENST00000406019 FYTTD1Q96QD9 318 aaKnown RBP5.25□□□□□ -1.57
HMGB1P13-201ENST00000406019 MXD3Q9BW11 206 aa5.25□□□□□ -1.57
HMGB1P13-201ENST00000406019 PRSS22Q9GZN4 317 aa5.25□□□□□ -1.57
HMGB1P13-201ENST00000406019 SH3GLB2Q9NR46 395 aa5.25□□□□□ -1.57
HMGB1P13-201ENST00000406019 LIMA1Q9UHB6 759 aaKnown RBP5.25□□□□□ -1.57
HMGB1P13-201ENST00000406019 TMEM5Q9Y2B1 443 aa5.25□□□□□ -1.57
HMGB1P13-201ENST00000406019 C17orf113A0A1B0GUU1 675 aa5.24□□□□□ -1.57
HMGB1P13-201ENST00000406019 MCIDASD6RGH6 385 aa5.24□□□□□ -1.57
HMGB1P13-201ENST00000406019 E5RJQ4 531 aa5.24□□□□□ -1.57
HMGB1P13-201ENST00000406019 BEST1O76090 585 aa5.24□□□□□ -1.57
HMGB1P13-201ENST00000406019 CNTN5O94779 1100 aa5.24□□□□□ -1.57
HMGB1P13-201ENST00000406019 EIF2S1P05198 315 aaKnown RBP5.24□□□□□ -1.57
HMGB1P13-201ENST00000406019 RFPL3SP0C7P2 107 aa5.24□□□□□ -1.57
HMGB1P13-201ENST00000406019 GLULP15104 373 aa5.24□□□□□ -1.57
HMGB1P13-201ENST00000406019 CPOXP36551 454 aa5.24□□□□□ -1.57
HMGB1P13-201ENST00000406019 ZNF81P51508 661 aa5.24□□□□□ -1.57
HMGB1P13-201ENST00000406019 KRTAP1-1Q07627 177 aa5.24□□□□□ -1.57
HMGB1P13-201ENST00000406019 DMWDQ09019 674 aa5.24□□□□□ -1.57
HMGB1P13-201ENST00000406019 NEXNQ0ZGT2 675 aa5.24□□□□□ -1.57
HMGB1P13-201ENST00000406019 STK4Q13043 487 aa5.24□□□□□ -1.57
HMGB1P13-201ENST00000406019 IL13RA2Q14627 380 aa5.24□□□□□ -1.57
HMGB1P13-201ENST00000406019 MED22Q15528 200 aa5.24□□□□□ -1.57
HMGB1P13-201ENST00000406019 SRSF7Q16629 238 aaKnown RBP eCLIP5.24□□□□□ -1.57
HMGB1P13-201ENST00000406019 PLEKHS1Q5SXH7 462 aa5.24□□□□□ -1.57
HMGB1P13-201ENST00000406019 TMEM63BQ5T3F8 832 aa5.24□□□□□ -1.57
HMGB1P13-201ENST00000406019 CDC73Q6P1J9 531 aa5.24□□□□□ -1.57
HMGB1P13-201ENST00000406019 RRM2BQ7LG56 351 aa5.24□□□□□ -1.57
HMGB1P13-201ENST00000406019 MDGA2Q7Z553 956 aa5.24□□□□□ -1.57
HMGB1P13-201ENST00000406019 TMEM200AQ86VY9 491 aa5.24□□□□□ -1.57
HMGB1P13-201ENST00000406019 ARHGEF2Q92974 986 aaKnown RBP5.24□□□□□ -1.57
HMGB1P13-201ENST00000406019 CALML4Q96GE6 196 aa5.24□□□□□ -1.57
HMGB1P13-201ENST00000406019 KLHL15Q96M94 604 aa5.24□□□□□ -1.57
HMGB1P13-201ENST00000406019 ZMAT2Q96NC0 199 aaKnown RBP5.24□□□□□ -1.57
HMGB1P13-201ENST00000406019 ADGRE3Q9BY15 652 aa5.24□□□□□ -1.57
HMGB1P13-201ENST00000406019 SCPEP1Q9HB40 452 aa5.24□□□□□ -1.57
HMGB1P13-201ENST00000406019 TMEM248Q9NWD8 314 aa5.24□□□□□ -1.57
HMGB1P13-201ENST00000406019 CDH22Q9UJ99 828 aa5.24□□□□□ -1.57
HMGB1P13-201ENST00000406019 RPS6KA6Q9UK32 745 aa5.24□□□□□ -1.57
HMGB1P13-201ENST00000406019 WDR17Q8IZU2 1322 aa5.23□□□□□ -1.57
HMGB1P13-201ENST00000406019 TEX13CA0A0J9YWL9 993 aa5.23□□□□□ -1.57
HMGB1P13-201ENST00000406019 A0A1W2PQF6 199 aa5.23□□□□□ -1.57
HMGB1P13-201ENST00000406019 TTC34A8MYJ7 566 aa5.23□□□□□ -1.57
HMGB1P13-201ENST00000406019 UBE2Q2LH0YL09 131 aa5.23□□□□□ -1.57
HMGB1P13-201ENST00000406019 FYB1O15117 783 aa5.23□□□□□ -1.57
HMGB1P13-201ENST00000406019 BCAT2O15382 392 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P13-201ENST00000406019 OR2C1O95371 312 aa5.23□□□□□ -1.57
HMGB1P13-201ENST00000406019 TOP3BO95985 862 aaKnown RBP5.23□□□□□ -1.57
HMGB1P13-201ENST00000406019 RPN1P04843 607 aaKnown RBP5.23□□□□□ -1.57
HMGB1P13-201ENST00000406019 PBX3P40426 434 aa5.23□□□□□ -1.57
HMGB1P13-201ENST00000406019 UBA7P41226 1012 aa5.23□□□□□ -1.57
HMGB1P13-201ENST00000406019 OAZ1P54368 228 aa5.23□□□□□ -1.57
HMGB1P13-201ENST00000406019 OLR1P78380 273 aa5.23□□□□□ -1.57
HMGB1P13-201ENST00000406019 AIMP2Q13155 320 aaKnown RBP5.23□□□□□ -1.57
HMGB1P13-201ENST00000406019 CNGA3Q16281 694 aa5.23□□□□□ -1.57
HMGB1P13-201ENST00000406019 TTI2Q6NXR4 508 aa5.23□□□□□ -1.57
HMGB1P13-201ENST00000406019 SLC2A7Q6PXP3 512 aa5.23□□□□□ -1.57
HMGB1P13-201ENST00000406019 SERPINA13PQ6UXR4 307 aa5.23□□□□□ -1.57
HMGB1P13-201ENST00000406019 DCDC5Q6ZRR9 648 aa5.23□□□□□ -1.57
HMGB1P13-201ENST00000406019 RNF144BQ7Z419 303 aa5.23□□□□□ -1.57
HMGB1P13-201ENST00000406019 ADGRF2Q8IZF7 708 aa5.23□□□□□ -1.57
HMGB1P13-201ENST00000406019 FRMD1Q8N878 549 aa5.23□□□□□ -1.57
HMGB1P13-201ENST00000406019 TMEM116Q8NCL8 245 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms