RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 PGBD5Q8N414 524 aa33.83■■■■□ 3.01
CSNK1E-204ENST00000403904 ERLEC1Q96DZ1 483 aa33.83■■■■□ 3.01
CSNK1E-204ENST00000403904 PSKH2Q96QS6 385 aa33.83■■■■□ 3.01
CSNK1E-204ENST00000403904 FERMT1Q9BQL6 677 aa33.83■■■■□ 3.01
CSNK1E-204ENST00000403904 DDX47Q9H0S4 455 aaKnown RBP33.83■■■■□ 3.01
CSNK1E-204ENST00000403904 LHX3Q9UBR4 397 aa33.83■■■■□ 3.01
CSNK1E-204ENST00000403904 SGK1O00141 431 aa33.82■■■■□ 3
CSNK1E-204ENST00000403904 NEBLO76041 1014 aa33.82■■■■□ 3
CSNK1E-204ENST00000403904 EPHX1P07099 455 aa33.82■■■■□ 3
CSNK1E-204ENST00000403904 COILP38432 576 aaPredicted RBP33.82■■■■□ 3
CSNK1E-204ENST00000403904 HNRNPA1L2Q32P51 320 aaKnown RBP33.82■■■■□ 3
CSNK1E-204ENST00000403904 TEX44Q53QW1 395 aa33.82■■■■□ 3
CSNK1E-204ENST00000403904 CWF19L1Q69YN2 538 aaKnown RBP33.82■■■■□ 3
CSNK1E-204ENST00000403904 CCDC137Q6PK04 289 aaKnown RBP33.82■■■■□ 3
CSNK1E-204ENST00000403904 BBS5Q8N3I7 341 aa33.82■■■■□ 3
CSNK1E-204ENST00000403904 CNTD1Q8N815 330 aa33.82■■■■□ 3
CSNK1E-204ENST00000403904 SPATA4Q8NEY3 305 aa33.82■■■■□ 3
CSNK1E-204ENST00000403904 PTPRN2Q92932 1015 aa33.82■■■■□ 3
CSNK1E-204ENST00000403904 ISG20Q96AZ6 181 aaKnown RBP33.82■■■■□ 3
CSNK1E-204ENST00000403904 CLDN23Q96B33 292 aa33.82■■■■□ 3
CSNK1E-204ENST00000403904 CCDC114Q96M63 670 aa33.82■■■■□ 3
CSNK1E-204ENST00000403904 AGAP3Q96P47 875 aa33.82■■■■□ 3
CSNK1E-204ENST00000403904 TTLL3Q9Y4R7 772 aa33.82■■■■□ 3
CSNK1E-204ENST00000403904 DCNP07585 359 aaKnown RBP33.81■■■■□ 3
CSNK1E-204ENST00000403904 CKAP4Q07065 602 aaKnown RBP33.81■■■■□ 3
CSNK1E-204ENST00000403904 GAS6Q14393 721 aa33.81■■■■□ 3
CSNK1E-204ENST00000403904 PCDH20Q8N6Y1 951 aaKnown RBP33.81■■■■□ 3
CSNK1E-204ENST00000403904 CFAP69A5D8W1 941 aa33.81■■■■□ 3
CSNK1E-204ENST00000403904 HLA-DQB2P05538 268 aa33.81■■■■□ 3
CSNK1E-204ENST00000403904 RGRP47804 291 aa33.81■■■■□ 3
CSNK1E-204ENST00000403904 MAXP61244 160 aa33.81■■■■□ 3
CSNK1E-204ENST00000403904 KCTD19Q17RG1 926 aaPredicted RBP33.81■■■■□ 3
CSNK1E-204ENST00000403904 ATXN7L2Q5T6C5 722 aaPredicted RBP33.81■■■■□ 3
CSNK1E-204ENST00000403904 ZNF567Q8N184 647 aa33.81■■■■□ 3
CSNK1E-204ENST00000403904 GABRG3Q99928 467 aa33.81■■■■□ 3
CSNK1E-204ENST00000403904 POLR3BQ9NW08 1133 aaPredicted RBP33.81■■■■□ 3
CSNK1E-204ENST00000403904 STIP1P31948 543 aaKnown RBP33.8■■■■□ 3
CSNK1E-204ENST00000403904 KLHL7Q8IXQ5 586 aa33.8■■■■□ 3
CSNK1E-204ENST00000403904 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP33.8■■■■□ 3
CSNK1E-204ENST00000403904 ATL2Q8NHH9 583 aa33.8■■■■□ 3
CSNK1E-204ENST00000403904 SUN2Q9UH99 717 aa33.8■■■■□ 3
CSNK1E-204ENST00000403904 EDDM13A0A1B0GTR0 161 aa33.79■■■■□ 3
CSNK1E-204ENST00000403904 CCDC188H7C350 402 aa33.79■■■■□ 3
CSNK1E-204ENST00000403904 PI15O43692 258 aa33.79■■■■□ 3
CSNK1E-204ENST00000403904 CHRNA3P32297 505 aa33.79■■■■□ 3
CSNK1E-204ENST00000403904 ITKQ08881 620 aa33.79■■■■□ 3
CSNK1E-204ENST00000403904 C2orf54Q08AI8 447 aa33.79■■■■□ 3
CSNK1E-204ENST00000403904 HSF5Q4G112 596 aaPredicted RBP33.79■■■■□ 3
CSNK1E-204ENST00000403904 GSTA5Q7RTV2 222 aa33.79■■■■□ 3
CSNK1E-204ENST00000403904 ZNF572Q7Z3I7 529 aaPredicted RBP33.79■■■■□ 3
CSNK1E-204ENST00000403904 OR2A12Q8NGT7 310 aa33.79■■■■□ 3
CSNK1E-204ENST00000403904 CCDC110Q8TBZ0 833 aa33.79■■■■□ 3
CSNK1E-204ENST00000403904 TEKT5Q96M29 485 aa33.79■■■■□ 3
CSNK1E-204ENST00000403904 VAT1Q99536 393 aa33.79■■■■□ 3
CSNK1E-204ENST00000403904 KLHL8Q9P2G9 620 aaPredicted RBP33.79■■■■□ 3
CSNK1E-204ENST00000403904 MMP17Q9ULZ9 603 aa33.79■■■■□ 3
CSNK1E-204ENST00000403904 ATP8A1Q9Y2Q0 1164 aa33.79■■■■□ 3
CSNK1E-204ENST00000403904 CKAP5Q14008 2032 aa33.79■■■■□ 3
CSNK1E-204ENST00000403904 TTC24A2A3L6 582 aaPredicted RBP33.78■■■■□ 3
CSNK1E-204ENST00000403904 ZBTB24O43167 697 aaPredicted RBP33.78■■■■□ 3
CSNK1E-204ENST00000403904 SIN3BO75182 1162 aa33.78■■■■□ 3
CSNK1E-204ENST00000403904 GJB3O75712 270 aa33.78■■■■□ 3
CSNK1E-204ENST00000403904 STK10O94804 968 aaKnown RBP33.78■■■■□ 3
CSNK1E-204ENST00000403904 IFNB1P01574 187 aa33.78■■■■□ 3
CSNK1E-204ENST00000403904 HOXB2P14652 356 aa33.78■■■■□ 3
CSNK1E-204ENST00000403904 FNTAP49354 379 aa33.78■■■■□ 3
CSNK1E-204ENST00000403904 CARD16Q5EG05 197 aa33.78■■■■□ 3
CSNK1E-204ENST00000403904 C9orf64Q5T6V5 341 aa33.78■■■■□ 3
CSNK1E-204ENST00000403904 PID1Q7Z2X4 250 aa33.78■■■■□ 3
CSNK1E-204ENST00000403904 OR2AP1Q8NGE2 309 aa33.78■■■■□ 3
CSNK1E-204ENST00000403904 MGME1Q9BQP7 344 aa33.78■■■■□ 3
CSNK1E-204ENST00000403904 COL25A1Q9BXS0 654 aaPredicted RBP33.78■■■■□ 3
CSNK1E-204ENST00000403904 AMACRQ9UHK6 382 aa33.78■■■■□ 3
CSNK1E-204ENST00000403904 CHURC1-FNTBB4DL54 471 aa33.77■■■■□ 3
CSNK1E-204ENST00000403904 ZNF189O75820 626 aaPredicted RBP33.77■■■■□ 3
CSNK1E-204ENST00000403904 RPS9P46781 194 aaKnown RBP33.77■■■■□ 3
CSNK1E-204ENST00000403904 SNRPD1P62314 119 aaKnown RBP33.77■■■■□ 3
CSNK1E-204ENST00000403904 EOGTQ5NDL2 527 aa33.77■■■■□ 3
CSNK1E-204ENST00000403904 ANKRD20A2Q5SQ80 823 aa33.77■■■■□ 3
CSNK1E-204ENST00000403904 ANKRD20A1Q5TYW2 823 aa33.77■■■■□ 3
CSNK1E-204ENST00000403904 ANKRD20A3Q5VUR7 823 aa33.77■■■■□ 3
CSNK1E-204ENST00000403904 DPY19L3Q6ZPD9 716 aa33.77■■■■□ 3
CSNK1E-204ENST00000403904 PRUNE1Q86TP1 453 aa33.77■■■■□ 3
CSNK1E-204ENST00000403904 RYBPQ8N488 228 aaPredicted RBP33.77■■■■□ 3
CSNK1E-204ENST00000403904 OR6K2Q8NGY2 324 aa33.77■■■■□ 3
CSNK1E-204ENST00000403904 RTP4Q96DX8 246 aa33.77■■■■□ 3
CSNK1E-204ENST00000403904 CHRDQ9H2X0 955 aa33.77■■■■□ 3
CSNK1E-204ENST00000403904 EPHX3Q9H6B9 360 aa33.77■■■■□ 3
CSNK1E-204ENST00000403904 PRSS16Q9NQE7 514 aa33.77■■■■□ 3
CSNK1E-204ENST00000403904 C5orf60A6NFR6 353 aa33.77■■■■□ 3
CSNK1E-204ENST00000403904 TNFRSF10AO00220 468 aa33.77■■■■□ 3
CSNK1E-204ENST00000403904 ETS1P14921 441 aa33.77■■■■□ 3
CSNK1E-204ENST00000403904 HSPA9P38646 679 aaKnown RBP33.77■■■■□ 3
CSNK1E-204ENST00000403904 RECQLP46063 649 aaPredicted RBP33.77■■■■□ 3
CSNK1E-204ENST00000403904 SCNN1BP51168 640 aa33.77■■■■□ 3
CSNK1E-204ENST00000403904 NSUN2Q08J23 767 aaKnown RBP eCLIP33.77■■■■□ 3
CSNK1E-204ENST00000403904 KIAA1211LQ6NV74 962 aa33.77■■■■□ 3
CSNK1E-204ENST00000403904 GLIS1Q8NBF1 620 aa33.77■■■■□ 3
CSNK1E-204ENST00000403904 GDAP1L1Q96MZ0 367 aa33.77■■■■□ 3
CSNK1E-204ENST00000403904 POLR1EQ9GZS1 481 aaKnown RBP33.77■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms