RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 BBS7Q8IWZ6 715 aa26.02■■□□□ 1.76
CPNE1-205ENST00000401607 C4orf33Q8N1A6 199 aa26.02■■□□□ 1.76
CPNE1-205ENST00000401607 ZNF669Q96BR6 464 aaPredicted RBP26.02■■□□□ 1.76
CPNE1-205ENST00000401607 TMA16Q96EY4 203 aaKnown RBP26.02■■□□□ 1.76
CPNE1-205ENST00000401607 FSD1LQ9BXM9 530 aa26.02■■□□□ 1.76
CPNE1-205ENST00000401607 ATP13A1Q9HD20 1204 aa26.02■■□□□ 1.76
CPNE1-205ENST00000401607 VPS45Q9NRW7 570 aa26.02■■□□□ 1.76
CPNE1-205ENST00000401607 INTS9Q9NV88 658 aaKnown RBP26.02■■□□□ 1.76
CPNE1-205ENST00000401607 HELZP42694 1942 aaKnown RBP26.01■■□□□ 1.76
CPNE1-205ENST00000401607 DOCK6Q96HP0 2047 aa26.01■■□□□ 1.76
CPNE1-205ENST00000401607 IQANK1A0A1B0GTG1 560 aa26.01■■□□□ 1.75
CPNE1-205ENST00000401607 ZCWPW2A0A1B0GU75 182 aa26.01■■□□□ 1.75
CPNE1-205ENST00000401607 FAM237BA0A1B0GVD1 139 aa26.01■■□□□ 1.75
CPNE1-205ENST00000401607 LEFTY2O00292 366 aa26.01■■□□□ 1.75
CPNE1-205ENST00000401607 PER2O15055 1255 aa26.01■■□□□ 1.75
CPNE1-205ENST00000401607 RHOP08100 348 aa26.01■■□□□ 1.75
CPNE1-205ENST00000401607 TEAD2Q15562 447 aa26.01■■□□□ 1.75
CPNE1-205ENST00000401607 PCSK7Q16549 785 aa26.01■■□□□ 1.75
CPNE1-205ENST00000401607 ANKRD20A4Q4UJ75 823 aa26.01■■□□□ 1.75
CPNE1-205ENST00000401607 FSCBQ5H9T9 825 aa26.01■■□□□ 1.75
CPNE1-205ENST00000401607 RNF219Q5W0B1 726 aaPredicted RBP26.01■■□□□ 1.75
CPNE1-205ENST00000401607 MARK2Q7KZI7 788 aaKnown RBP26.01■■□□□ 1.75
CPNE1-205ENST00000401607 ARHGAP26Q9UNA1 814 aa26.01■■□□□ 1.75
CPNE1-205ENST00000401607 MAGEB16A2A368 324 aa26■■□□□ 1.75
CPNE1-205ENST00000401607 LUC7L3O95232 432 aaKnown RBP26■■□□□ 1.75
CPNE1-205ENST00000401607 FGF19O95750 216 aa26■■□□□ 1.75
CPNE1-205ENST00000401607 ZNF235Q14590 738 aa26■■□□□ 1.75
CPNE1-205ENST00000401607 SLC5A9Q2M3M2 681 aa26■■□□□ 1.75
CPNE1-205ENST00000401607 PDE12Q6L8Q7 609 aaKnown RBP26■■□□□ 1.75
CPNE1-205ENST00000401607 ZNF783Q6ZMS7 281 aa26■■□□□ 1.75
CPNE1-205ENST00000401607 CPXM2Q8N436 756 aa26■■□□□ 1.75
CPNE1-205ENST00000401607 CARNMT1Q8N4J0 409 aa26■■□□□ 1.75
CPNE1-205ENST00000401607 CERS2Q96G23 380 aa26■■□□□ 1.75
CPNE1-205ENST00000401607 SMC6Q96SB8 1091 aa26■■□□□ 1.75
CPNE1-205ENST00000401607 POLR1EQ9GZS1 481 aaKnown RBP26■■□□□ 1.75
CPNE1-205ENST00000401607 CHRAC1Q9NRG0 131 aa26■■□□□ 1.75
CPNE1-205ENST00000401607 SLC17A6Q9P2U8 582 aa26■■□□□ 1.75
CPNE1-205ENST00000401607 UBA2Q9UBT2 640 aaPredicted RBP26■■□□□ 1.75
CPNE1-205ENST00000401607 ZNF510Q9Y2H8 683 aa26■■□□□ 1.75
CPNE1-205ENST00000401607 FAM169AQ9Y6X4 670 aa26■■□□□ 1.75
CPNE1-205ENST00000401607 SPAG7O75391 227 aa26■■□□□ 1.75
CPNE1-205ENST00000401607 GJB3O75712 270 aa26■■□□□ 1.75
CPNE1-205ENST00000401607 HNRNPA1P09651 372 aaKnown RBP eCLIP26■■□□□ 1.75
CPNE1-205ENST00000401607 PBX2P40425 430 aa26■■□□□ 1.75
CPNE1-205ENST00000401607 CHRNA4P43681 627 aa26■■□□□ 1.75
CPNE1-205ENST00000401607 FRG1Q14331 258 aaKnown RBP26■■□□□ 1.75
CPNE1-205ENST00000401607 ALG1LQ6GMV1 187 aa26■■□□□ 1.75
CPNE1-205ENST00000401607 CCDC117Q8IWD4 279 aaPredicted RBP26■■□□□ 1.75
CPNE1-205ENST00000401607 ANKRD42Q8N9B4 389 aa26■■□□□ 1.75
CPNE1-205ENST00000401607 MFSD3Q96ES6 412 aa26■■□□□ 1.75
CPNE1-205ENST00000401607 KIFC1Q9BW19 673 aa26■■□□□ 1.75
CPNE1-205ENST00000401607 MUC3BQ9H195 1237 aa26■■□□□ 1.75
CPNE1-205ENST00000401607 IL1RAPL1Q9NZN1 696 aa26■■□□□ 1.75
CPNE1-205ENST00000401607 NOTCH4Q99466 2003 aa25.99■■□□□ 1.75
CPNE1-205ENST00000401607 MYLKQ15746 1914 aa25.99■■□□□ 1.75
CPNE1-205ENST00000401607 H0Y626 953 aa25.99■■□□□ 1.75
CPNE1-205ENST00000401607 PRPF4O43172 522 aaKnown RBP eCLIP25.99■■□□□ 1.752e-8■□□□□ 11.3
CPNE1-205ENST00000401607 ZNF449Q6P9G9 518 aa25.99■■□□□ 1.75
CPNE1-205ENST00000401607 KDELC2Q7Z4H8 507 aa25.99■■□□□ 1.75
CPNE1-205ENST00000401607 SERBP1Q8NC51 408 aaKnown RBP eCLIP25.99■■□□□ 1.75
CPNE1-205ENST00000401607 WFDC5Q8TCV5 224 aa25.99■■□□□ 1.75
CPNE1-205ENST00000401607 MGARPQ8TDB4 240 aa25.99■■□□□ 1.75
CPNE1-205ENST00000401607 SEMA3CQ99985 751 aa25.99■■□□□ 1.75
CPNE1-205ENST00000401607 ARNT2Q9HBZ2 717 aa25.99■■□□□ 1.75
CPNE1-205ENST00000401607 PPANQ9NQ55 473 aaKnown RBP25.99■■□□□ 1.75
CPNE1-205ENST00000401607 CCL26Q9Y258 94 aa25.99■■□□□ 1.75
CPNE1-205ENST00000401607 TYW5A2RUC4 315 aaKnown RBP25.98■■□□□ 1.75
CPNE1-205ENST00000401607 SRRM3A6NNA2 597 aaPredicted RBP25.98■■□□□ 1.75
CPNE1-205ENST00000401607 KRT4P19013 534 aa25.98■■□□□ 1.75
CPNE1-205ENST00000401607 DDX6P26196 483 aaKnown RBP eCLIP25.98■■□□□ 1.759e-13■■■■□ 25.3
CPNE1-205ENST00000401607 NMBRP28336 390 aa25.98■■□□□ 1.75
CPNE1-205ENST00000401607 MZF1P28698 734 aaPredicted RBP25.98■■□□□ 1.75
CPNE1-205ENST00000401607 NTHL1P78549 312 aa25.98■■□□□ 1.75
CPNE1-205ENST00000401607 MGAT5Q09328 741 aa25.98■■□□□ 1.75
CPNE1-205ENST00000401607 PCID2Q5JVF3 399 aa25.98■■□□□ 1.75
CPNE1-205ENST00000401607 ADGRD2Q7Z7M1 963 aa25.98■■□□□ 1.75
CPNE1-205ENST00000401607 CMTM8Q8IZV2 173 aa25.98■■□□□ 1.75
CPNE1-205ENST00000401607 TDRD5Q8NAT2 981 aaKnown RBP25.98■■□□□ 1.75
CPNE1-205ENST00000401607 RIN3Q8TB24 985 aa25.98■■□□□ 1.75
CPNE1-205ENST00000401607 MGME1Q9BQP7 344 aa25.98■■□□□ 1.75
CPNE1-205ENST00000401607 EPN3Q9H201 632 aa25.98■■□□□ 1.75
CPNE1-205ENST00000401607 TASP1Q9H6P5 420 aa25.98■■□□□ 1.75
CPNE1-205ENST00000401607 SSU72Q9NP77 194 aaKnown RBP25.98■■□□□ 1.75
CPNE1-205ENST00000401607 SEPT3Q9UH03 358 aa25.98■■□□□ 1.75
CPNE1-205ENST00000401607 OR51B4Q9Y5P0 310 aa25.98■■□□□ 1.75
CPNE1-205ENST00000401607 HCFC2Q9Y5Z7 792 aa25.98■■□□□ 1.75
CPNE1-205ENST00000401607 FAM47DPA6NHR8 397 aa25.97■■□□□ 1.75
CPNE1-205ENST00000401607 CBX4O00257 560 aa25.97■■□□□ 1.75
CPNE1-205ENST00000401607 TYROBPO43914 113 aa25.97■■□□□ 1.75
CPNE1-205ENST00000401607 ERVK-10P10266 1014 aa25.97■■□□□ 1.75
CPNE1-205ENST00000401607 SEC24CP53992 1094 aa25.97■■□□□ 1.75
CPNE1-205ENST00000401607 ARF5P84085 180 aa25.97■■□□□ 1.75
CPNE1-205ENST00000401607 RFTN1Q14699 578 aaPredicted RBP25.97■■□□□ 1.75
CPNE1-205ENST00000401607 POU6F1Q14863 301 aa25.97■■□□□ 1.75
CPNE1-205ENST00000401607 LRRC14Q15048 493 aa25.97■■□□□ 1.75
CPNE1-205ENST00000401607 SMAD1Q15797 465 aaKnown RBP25.97■■□□□ 1.75
CPNE1-205ENST00000401607 PRSS36Q5K4E3 855 aa25.97■■□□□ 1.75
CPNE1-205ENST00000401607 ZNF697Q5TEC3 545 aa25.97■■□□□ 1.75
CPNE1-205ENST00000401607 RBM23Q86U06 439 aaKnown RBP25.97■■□□□ 1.75
CPNE1-205ENST00000401607 SH3RF2Q8TEC5 729 aa25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms