RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 SETD3Q86TU7 594 aaPredicted RBP12.17□□□□□ -0.46
LINC00544-201ENST00000400540 ZNF397Q8NF99 534 aaPredicted RBP12.17□□□□□ -0.46
LINC00544-201ENST00000400540 MAPK15Q8TD08 544 aa12.17□□□□□ -0.46
LINC00544-201ENST00000400540 TBCBQ99426 244 aa12.17□□□□□ -0.46
LINC00544-201ENST00000400540 SLC17A9Q9BYT1 436 aa12.17□□□□□ -0.46
LINC00544-201ENST00000400540 SEMA4CQ9C0C4 833 aa12.17□□□□□ -0.46
LINC00544-201ENST00000400540 SYNCQ9H7C4 482 aa12.17□□□□□ -0.46
LINC00544-201ENST00000400540 SIX2Q9NPC8 291 aa12.17□□□□□ -0.46
LINC00544-201ENST00000400540 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.17□□□□□ -0.46
LINC00544-201ENST00000400540 ZNF212Q9UDV6 495 aa12.17□□□□□ -0.46
LINC00544-201ENST00000400540 GGT7Q9UJ14 662 aa12.17□□□□□ -0.46
LINC00544-201ENST00000400540 COL6A6A6NMZ7 2263 aa12.16□□□□□ -0.46
LINC00544-201ENST00000400540 IGLV3-10A0A075B6K4 115 aa12.16□□□□□ -0.46
LINC00544-201ENST00000400540 DRGXA6NNA5 263 aa12.16□□□□□ -0.46
LINC00544-201ENST00000400540 ERVH48-1M5A8F1 160 aa12.16□□□□□ -0.46
LINC00544-201ENST00000400540 SPINT1O43278 529 aa12.16□□□□□ -0.46
LINC00544-201ENST00000400540 SRGAP2O75044 1071 aa12.16□□□□□ -0.46
LINC00544-201ENST00000400540 ZMPSTE24O75844 475 aa12.16□□□□□ -0.46
LINC00544-201ENST00000400540 DXOO77932 396 aaKnown RBP12.16□□□□□ -0.46
LINC00544-201ENST00000400540 GP1BAP07359 652 aa12.16□□□□□ -0.46
LINC00544-201ENST00000400540 PON1P27169 355 aa12.16□□□□□ -0.46
LINC00544-201ENST00000400540 OR1E1P30953 314 aa12.16□□□□□ -0.46
LINC00544-201ENST00000400540 GKP32189 559 aa12.16□□□□□ -0.46
LINC00544-201ENST00000400540 LSSP48449 732 aa12.16□□□□□ -0.46
LINC00544-201ENST00000400540 SERPINH1P50454 418 aaKnown RBP12.16□□□□□ -0.46
LINC00544-201ENST00000400540 CLCN6P51797 869 aa12.16□□□□□ -0.46
LINC00544-201ENST00000400540 CCNHP51946 323 aaPredicted RBP12.16□□□□□ -0.46
LINC00544-201ENST00000400540 NEK3P51956 506 aa12.16□□□□□ -0.46
LINC00544-201ENST00000400540 TMPRSS3P57727 454 aa12.16□□□□□ -0.46
LINC00544-201ENST00000400540 ARF5P84085 180 aa12.16□□□□□ -0.46
LINC00544-201ENST00000400540 PTK2Q05397 1052 aa12.16□□□□□ -0.46
LINC00544-201ENST00000400540 DEUP1Q05D60 604 aa12.16□□□□□ -0.46
LINC00544-201ENST00000400540 MTA1Q13330 715 aa12.16□□□□□ -0.46
LINC00544-201ENST00000400540 EXOC3L4Q17RC7 722 aa12.16□□□□□ -0.46
LINC00544-201ENST00000400540 DEFB133Q30KQ1 61 aa12.16□□□□□ -0.46
LINC00544-201ENST00000400540 C2CD6Q53TS8 623 aa12.16□□□□□ -0.46
LINC00544-201ENST00000400540 GUSBP11Q6P575 273 aa12.16□□□□□ -0.46
LINC00544-201ENST00000400540 GBP6Q6ZN66 633 aa12.16□□□□□ -0.46
LINC00544-201ENST00000400540 FAM181AQ8N9Y4 354 aa12.16□□□□□ -0.46
LINC00544-201ENST00000400540 OR6K2Q8NGY2 324 aa12.16□□□□□ -0.46
LINC00544-201ENST00000400540 KCNE4Q8WWG9 221 aa12.16□□□□□ -0.46
LINC00544-201ENST00000400540 NT5C3BQ969T7 300 aa12.16□□□□□ -0.46
LINC00544-201ENST00000400540 IFT43Q96FT9 208 aa12.16□□□□□ -0.46
LINC00544-201ENST00000400540 PPP1R16AQ96I34 528 aa12.16□□□□□ -0.46
LINC00544-201ENST00000400540 VCPIP1Q96JH7 1222 aa12.16□□□□□ -0.46
LINC00544-201ENST00000400540 FAM81BQ96LP2 452 aa12.16□□□□□ -0.46
LINC00544-201ENST00000400540 SPON2Q9BUD6 331 aa12.16□□□□□ -0.46
LINC00544-201ENST00000400540 ABCG4Q9H172 646 aa12.16□□□□□ -0.46
LINC00544-201ENST00000400540 POLR1BQ9H9Y6 1135 aa12.16□□□□□ -0.46
LINC00544-201ENST00000400540 SATB2Q9UPW6 733 aa12.16□□□□□ -0.46
LINC00544-201ENST00000400540 ITM2BQ9Y287 266 aa12.16□□□□□ -0.46
LINC00544-201ENST00000400540 FCF1Q9Y324 198 aaKnown RBP12.16□□□□□ -0.46
LINC00544-201ENST00000400540 FADS3Q9Y5Q0 445 aa12.16□□□□□ -0.46
LINC00544-201ENST00000400540 HS3ST3A1Q9Y663 406 aa12.16□□□□□ -0.46
LINC00544-201ENST00000400540 SPTY2D1-AS1A0A0U1RR47 76 aa12.15□□□□□ -0.46
LINC00544-201ENST00000400540 CPED1A4D0V7 1026 aa12.15□□□□□ -0.46
LINC00544-201ENST00000400540 NEMP2A6NFY4 417 aa12.15□□□□□ -0.46
LINC00544-201ENST00000400540 FOXN3O00409 490 aaPredicted RBP12.15□□□□□ -0.46
LINC00544-201ENST00000400540 KLK10O43240 276 aa12.15□□□□□ -0.46
LINC00544-201ENST00000400540 CD160O95971 181 aa12.15□□□□□ -0.46
LINC00544-201ENST00000400540 CSF2P04141 144 aa12.15□□□□□ -0.46
LINC00544-201ENST00000400540 NME1P15531 152 aaKnown RBP12.15□□□□□ -0.46
LINC00544-201ENST00000400540 ITGB7P26010 798 aa12.15□□□□□ -0.46
LINC00544-201ENST00000400540 L1CAMP32004 1257 aa12.15□□□□□ -0.46
LINC00544-201ENST00000400540 KRT9P35527 623 aa12.15□□□□□ -0.46
LINC00544-201ENST00000400540 FLT3P36888 993 aa12.15□□□□□ -0.46
LINC00544-201ENST00000400540 ABL2P42684 1182 aa12.15□□□□□ -0.46
LINC00544-201ENST00000400540 RECQLP46063 649 aaPredicted RBP12.15□□□□□ -0.46
LINC00544-201ENST00000400540 DNA2P51530 1060 aa12.15□□□□□ -0.46
LINC00544-201ENST00000400540 HNRNPKP61978 463 aaKnown RBP eCLIP12.15□□□□□ -0.46
LINC00544-201ENST00000400540 RPS21P63220 83 aaKnown RBP12.15□□□□□ -0.46
LINC00544-201ENST00000400540 CCDC15Q0P6D6 951 aa12.15□□□□□ -0.46
LINC00544-201ENST00000400540 PDE1CQ14123 709 aaPredicted RBP12.15□□□□□ -0.46
LINC00544-201ENST00000400540 LY6DQ14210 128 aa12.15□□□□□ -0.46
LINC00544-201ENST00000400540 ISXQ2M1V0 245 aa12.15□□□□□ -0.46
LINC00544-201ENST00000400540 RAB6CQ53S08 254 aa12.15□□□□□ -0.46
LINC00544-201ENST00000400540 TAF1BQ53T94 588 aaPredicted RBP12.15□□□□□ -0.46
LINC00544-201ENST00000400540 FAM102AQ5T9C2 384 aaPredicted RBP12.15□□□□□ -0.46
LINC00544-201ENST00000400540 BROXQ5VW32 411 aa12.15□□□□□ -0.46
LINC00544-201ENST00000400540 KIAA1161Q6NSJ0 714 aa12.15□□□□□ -0.46
LINC00544-201ENST00000400540 ZCCHC8Q6NZY4 707 aaKnown RBP12.15□□□□□ -0.46
LINC00544-201ENST00000400540 LRRC31Q6UY01 552 aa12.15□□□□□ -0.46
LINC00544-201ENST00000400540 EFL1Q7Z2Z2 1120 aaKnown RBP12.15□□□□□ -0.46
LINC00544-201ENST00000400540 PARGQ86W56 976 aa12.15□□□□□ -0.46
LINC00544-201ENST00000400540 IRF2BP1Q8IU81 584 aa12.15□□□□□ -0.46
LINC00544-201ENST00000400540 RBFAQ8N0V3 343 aa12.15□□□□□ -0.46
LINC00544-201ENST00000400540 PGAP3Q96FM1 320 aaPredicted RBP12.15□□□□□ -0.46
LINC00544-201ENST00000400540 ATXN7L3BQ96GX2 97 aa12.15□□□□□ -0.46
LINC00544-201ENST00000400540 KLF6Q99612 283 aaPredicted RBP12.15□□□□□ -0.46
LINC00544-201ENST00000400540 DUSP23Q9BVJ7 150 aa12.15□□□□□ -0.46
LINC00544-201ENST00000400540 TM6SF2Q9BZW4 377 aa12.15□□□□□ -0.46
LINC00544-201ENST00000400540 RAB6CQ9H0N0 254 aa12.15□□□□□ -0.46
LINC00544-201ENST00000400540 TCEAL2Q9H3H9 227 aaPredicted RBP12.15□□□□□ -0.46
LINC00544-201ENST00000400540 ZDHHC6Q9H6R6 413 aa12.15□□□□□ -0.46
LINC00544-201ENST00000400540 ATP13A1Q9HD20 1204 aa12.15□□□□□ -0.46
LINC00544-201ENST00000400540 RRN3Q9NYV6 651 aa12.15□□□□□ -0.46
LINC00544-201ENST00000400540 DNAJC12Q9UKB3 198 aa12.15□□□□□ -0.46
LINC00544-201ENST00000400540 PNMA8BQ9ULN7 279 aaPredicted RBP12.15□□□□□ -0.46
LINC00544-201ENST00000400540 STAP1Q9ULZ2 295 aa12.15□□□□□ -0.46
LINC00544-201ENST00000400540 IGLON5A6NGN9 336 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms