RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 NR6A1Q15406 480 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 CRTC3Q6UUV7 619 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 LRRC6Q86X45 466 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 PSTKQ8IV42 348 aaKnown RBP8.04□□□□□ -1.12
USP47-203ENST00000399455 IL31RAQ8NI17 732 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 CLIP3Q96DZ5 547 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 C8orf33Q9H7E9 229 aaPredicted RBP8.04□□□□□ -1.12
USP47-203ENST00000399455 SCN3BQ9NY72 215 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 CLDN5O00501 218 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 B4GALT5O43286 388 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 AKAP10O43572 662 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 TM7SF2O76062 418 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 ENO3P13929 434 aaPredicted RBP8.04□□□□□ -1.12
USP47-203ENST00000399455 NOS3P29474 1203 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 TNFSF9P41273 254 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 SLC5A3P53794 718 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 NAA30Q147X3 362 aaPredicted RBP8.04□□□□□ -1.12
USP47-203ENST00000399455 AP5B1Q2VPB7 878 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 PLA2G4EQ3MJ16 856 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 TCEAL5Q5H9L2 206 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 STXBP5Q5T5C0 1151 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 GDF6Q6KF10 455 aaPredicted RBP8.04□□□□□ -1.12
USP47-203ENST00000399455 AHI1Q8N157 1196 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 TMEM132CQ8N3T6 1108 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 FAM136AQ96C01 138 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 SPATA5L1Q9BVQ7 753 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 IL36AQ9UHA7 158 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 AP3M1Q9Y2T2 418 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 IRAK2O43187 625 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 B4GALT4O60513 344 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 ADH1BP00325 375 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 FGF1P05230 155 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 ENO1P06733 434 aaKnown RBP8.04□□□□□ -1.12
USP47-203ENST00000399455 UMPSP11172 480 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 OXTRP30559 389 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 SKIV2L2P42285 1042 aaKnown RBP8.04□□□□□ -1.12
USP47-203ENST00000399455 MATKP42679 507 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 HSDL1Q3SXM5 330 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 ATP13A5Q4VNC0 1218 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 SLC39A5Q6ZMH5 540 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 ALLCQ8N6M5 410 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 CD101Q93033 1021 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 SGF29Q96ES7 293 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 SUSD2Q9UGT4 822 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 CORO2BQ9UQ03 480 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 ASF1AQ9Y294 204 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 PHRF1Q9P1Y6 1649 aaKnown RBP8.04□□□□□ -1.12
USP47-203ENST00000399455 ASTN2O75129 1339 aaPredicted RBP8.04□□□□□ -1.12
USP47-203ENST00000399455 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.04□□□□□ -1.12
USP47-203ENST00000399455 TACR2P21452 398 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 TOB1P50616 345 aaPredicted RBP8.04□□□□□ -1.12
USP47-203ENST00000399455 MBTD1Q05BQ5 628 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 FOXM1Q08050 763 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 CASKIN2Q8WXE0 1202 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 CDH19Q9H159 772 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 IRF2BPLQ9H1B7 796 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 RNF19AQ9NV58 838 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 COPS7AQ9UBW8 275 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 MAP3K6O95382 1288 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 CHRNA1P02708 482 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 CDH3P22223 829 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 SERPINB10P48595 397 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 SPIRE1Q08AE8 756 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 FIGNQ5HY92 759 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 USP49Q70CQ1 688 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 KRT73Q86Y46 540 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 TCAIMQ8N3R3 496 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 COL26A1Q96A83 441 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 CHP1Q99653 195 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 NSUN3Q9H649 340 aaKnown RBP8.03□□□□□ -1.12
USP47-203ENST00000399455 NFKBIL1Q9UBC1 381 aaPredicted RBP8.03□□□□□ -1.12
USP47-203ENST00000399455 SHOC2Q9UQ13 582 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 EDDM13A0A1B0GTR0 161 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 CAPN14A8MX76 684 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 PAGE1O75459 146 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 C1RP00736 705 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 ARRB1P49407 418 aaPredicted RBP8.03□□□□□ -1.12
USP47-203ENST00000399455 NRLP54845 237 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 AGBL2Q5U5Z8 902 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 ZNF470Q6ECI4 717 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 CMTR2Q8IYT2 770 aaKnown RBP8.03□□□□□ -1.12
USP47-203ENST00000399455 TBCDQ9BTW9 1192 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 MLXIPLQ9NP71 852 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 CYLDQ9NQC7 956 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 ENOPH1Q9UHY7 261 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 DOT1LQ8TEK3 1739 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 WDR27A2RRH5 827 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 ABCB1P08183 1280 aaPredicted RBP8.03□□□□□ -1.12
USP47-203ENST00000399455 GSTM1P09488 218 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 MIPP30301 263 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 GHRHRQ02643 423 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 PHF19Q5T6S3 580 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 PRMT1Q99873 361 aaKnown RBP8.03□□□□□ -1.12
USP47-203ENST00000399455 DPEP2Q9H4A9 486 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 KLQ9UEF7 1012 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 SOX13Q9UN79 622 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 PCDHGB3Q9Y5G1 929 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 CPQQ9Y646 472 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 GMNCA6NCL1 334 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 PEX12O00623 359 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms