RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 NOL6Q9H6R4 1146 aaKnown RBP15.16■□□□□ 0.02
SMIM11A-203ENST00000399299 USP24Q9UPU5 2620 aa15.16■□□□□ 0.02
SMIM11A-203ENST00000399299 DOCK9Q9BZ29 2069 aa15.16■□□□□ 0.02
SMIM11A-203ENST00000399299 FRYQ5TBA9 3013 aa15.16■□□□□ 0.02
SMIM11A-203ENST00000399299 SPAARA0A1B0GVQ0 90 aa15.15■□□□□ 0.02
SMIM11A-203ENST00000399299 KDELR3O43731 214 aa15.15■□□□□ 0.02
SMIM11A-203ENST00000399299 PCDHGA12O60330 932 aa15.15■□□□□ 0.02
SMIM11A-203ENST00000399299 CBFA2T3O75081 653 aa15.15■□□□□ 0.02
SMIM11A-203ENST00000399299 LEFTY1O75610 366 aa15.15■□□□□ 0.02
SMIM11A-203ENST00000399299 TRIM16O95361 564 aa15.15■□□□□ 0.02
SMIM11A-203ENST00000399299 GSRP00390 522 aa15.15■□□□□ 0.02
SMIM11A-203ENST00000399299 WNT1P04628 370 aa15.15■□□□□ 0.02
SMIM11A-203ENST00000399299 SKILP12757 684 aa15.15■□□□□ 0.02
SMIM11A-203ENST00000399299 CCNHP51946 323 aaPredicted RBP15.15■□□□□ 0.02
SMIM11A-203ENST00000399299 FAM193AP78312 1265 aa15.15■□□□□ 0.02
SMIM11A-203ENST00000399299 ZBED6P86452 979 aa15.15■□□□□ 0.02
SMIM11A-203ENST00000399299 OVGP1Q12889 678 aa15.15■□□□□ 0.02
SMIM11A-203ENST00000399299 TRIP6Q15654 476 aaKnown RBP15.15■□□□□ 0.02
SMIM11A-203ENST00000399299 PARP15Q460N3 678 aa15.15■□□□□ 0.02
SMIM11A-203ENST00000399299 SETMARQ53H47 684 aaPredicted RBP15.15■□□□□ 0.02
SMIM11A-203ENST00000399299 SLC45A4Q5BKX6 768 aa15.15■□□□□ 0.02
SMIM11A-203ENST00000399299 ARSIQ5FYB1 569 aa15.15■□□□□ 0.02
SMIM11A-203ENST00000399299 KCNT1Q5JUK3 1230 aa15.15■□□□□ 0.02
SMIM11A-203ENST00000399299 ERN2Q76MJ5 926 aaKnown RBP15.15■□□□□ 0.02
SMIM11A-203ENST00000399299 GLRX5Q86SX6 157 aa15.15■□□□□ 0.02
SMIM11A-203ENST00000399299 IQCHQ86VS3 1027 aa15.15■□□□□ 0.02
SMIM11A-203ENST00000399299 UMODL1-AS1Q8N2C9 162 aa15.15■□□□□ 0.02
SMIM11A-203ENST00000399299 BAHD1Q8TBE0 780 aaPredicted RBP15.15■□□□□ 0.02
SMIM11A-203ENST00000399299 CASKIN2Q8WXE0 1202 aa15.15■□□□□ 0.02
SMIM11A-203ENST00000399299 ZNF653Q96CK0 615 aa15.15■□□□□ 0.02
SMIM11A-203ENST00000399299 LRIG1Q96JA1 1093 aa15.15■□□□□ 0.02
SMIM11A-203ENST00000399299 CAMK1GQ96NX5 476 aa15.15■□□□□ 0.02
SMIM11A-203ENST00000399299 NCAPGQ9BPX3 1015 aa15.15■□□□□ 0.02
SMIM11A-203ENST00000399299 MRPL47Q9HD33 250 aaKnown RBP15.15■□□□□ 0.02
SMIM11A-203ENST00000399299 AASDHPPTQ9NRN7 309 aa15.15■□□□□ 0.02
SMIM11A-203ENST00000399299 CNOT8Q9UFF9 292 aaKnown RBP15.15■□□□□ 0.02
SMIM11A-203ENST00000399299 PCOLCE2Q9UKZ9 415 aa15.15■□□□□ 0.02
SMIM11A-203ENST00000399299 CAPN11Q9UMQ6 739 aa15.15■□□□□ 0.02
SMIM11A-203ENST00000399299 AP4E1Q9UPM8 1137 aa15.15■□□□□ 0.02
SMIM11A-203ENST00000399299 FCF1Q9Y324 198 aaKnown RBP15.15■□□□□ 0.02
SMIM11A-203ENST00000399299 PCDHB9Q9Y5E1 797 aa15.15■□□□□ 0.02
SMIM11A-203ENST00000399299 H0Y8X5 98 aa15.14■□□□□ 0.01
SMIM11A-203ENST00000399299 CREB3O43889 395 aa15.14■□□□□ 0.01
SMIM11A-203ENST00000399299 RNGTTO60942 597 aaKnown RBP15.14■□□□□ 0.01
SMIM11A-203ENST00000399299 RNF8O76064 485 aa15.14■□□□□ 0.01
SMIM11A-203ENST00000399299 ITGB7P26010 798 aa15.14■□□□□ 0.01
SMIM11A-203ENST00000399299 FOXC1Q12948 553 aa15.14■□□□□ 0.01
SMIM11A-203ENST00000399299 TDRD12Q587J7 1177 aaKnown RBP15.14■□□□□ 0.01
SMIM11A-203ENST00000399299 ERMARDQ5T6L9 678 aa15.14■□□□□ 0.01
SMIM11A-203ENST00000399299 VPS36Q86VN1 386 aa15.14■□□□□ 0.01
SMIM11A-203ENST00000399299 PSTKQ8IV42 348 aaKnown RBP15.14■□□□□ 0.01
SMIM11A-203ENST00000399299 MFSD2AQ8NA29 543 aa15.14■□□□□ 0.01
SMIM11A-203ENST00000399299 ACTL7AQ9Y615 435 aa15.14■□□□□ 0.01
SMIM11A-203ENST00000399299 COL5A1P20908 1838 aaPredicted RBP15.13■□□□□ 0.01
SMIM11A-203ENST00000399299 A0A1B0GTQ1 180 aa15.13■□□□□ 0.01
SMIM11A-203ENST00000399299 RASA4BC9J798 803 aa15.13■□□□□ 0.01
SMIM11A-203ENST00000399299 PRAMEF26H0Y7S4 382 aa15.13■□□□□ 0.01
SMIM11A-203ENST00000399299 TLR4O00206 839 aa15.13■□□□□ 0.01
SMIM11A-203ENST00000399299 RNF103O00237 685 aa15.13■□□□□ 0.01
SMIM11A-203ENST00000399299 WNT9AO14904 365 aa15.13■□□□□ 0.01
SMIM11A-203ENST00000399299 YKT6O15498 198 aa15.13■□□□□ 0.01
SMIM11A-203ENST00000399299 RASA4O43374 803 aa15.13■□□□□ 0.01
SMIM11A-203ENST00000399299 PRPSAP2O60256 369 aa15.13■□□□□ 0.01
SMIM11A-203ENST00000399299 MAGEC1O60732 1142 aa15.13■□□□□ 0.01
SMIM11A-203ENST00000399299 GYPCP04921 128 aa15.13■□□□□ 0.01
SMIM11A-203ENST00000399299 SERPING1P05155 500 aa15.13■□□□□ 0.01
SMIM11A-203ENST00000399299 TPM3P06753 285 aa15.13■□□□□ 0.01
SMIM11A-203ENST00000399299 MAT2AP31153 395 aaKnown RBP15.13■□□□□ 0.01
SMIM11A-203ENST00000399299 GRK6P43250 576 aa15.13■□□□□ 0.01
SMIM11A-203ENST00000399299 DNA2P51530 1060 aa15.13■□□□□ 0.01
SMIM11A-203ENST00000399299 NEK3P51956 506 aa15.13■□□□□ 0.01
SMIM11A-203ENST00000399299 ZNF135P52742 658 aaPredicted RBP15.13■□□□□ 0.01
SMIM11A-203ENST00000399299 NXPH1P58417 271 aa15.13■□□□□ 0.01
SMIM11A-203ENST00000399299 TPI1P60174 286 aa15.13■□□□□ 0.01
SMIM11A-203ENST00000399299 SNRPD1P62314 119 aaKnown RBP15.13■□□□□ 0.01
SMIM11A-203ENST00000399299 ACAP1Q15027 740 aa15.13■□□□□ 0.01
SMIM11A-203ENST00000399299 INO80DQ53TQ3 878 aaPredicted RBP15.13■□□□□ 0.01
SMIM11A-203ENST00000399299 ZSCAN30Q86W11 494 aa15.13■□□□□ 0.01
SMIM11A-203ENST00000399299 HORMAD1Q86X24 394 aa15.13■□□□□ 0.01
SMIM11A-203ENST00000399299 DNAAF5Q86Y56 855 aa15.13■□□□□ 0.01
SMIM11A-203ENST00000399299 OXR1Q8N573 874 aa15.13■□□□□ 0.01
SMIM11A-203ENST00000399299 ARFGAP1Q8N6T3 406 aa15.13■□□□□ 0.01
SMIM11A-203ENST00000399299 OR2AP1Q8NGE2 309 aa15.13■□□□□ 0.01
SMIM11A-203ENST00000399299 SETD7Q8WTS6 366 aaKnown RBP15.13■□□□□ 0.01
SMIM11A-203ENST00000399299 ELF4Q99607 663 aaPredicted RBP15.13■□□□□ 0.01
SMIM11A-203ENST00000399299 CDC6Q99741 560 aa15.13■□□□□ 0.01
SMIM11A-203ENST00000399299 SNRNP25Q9BV90 132 aaKnown RBP15.13■□□□□ 0.01
SMIM11A-203ENST00000399299 TM6SF2Q9BZW4 377 aa15.13■□□□□ 0.01
SMIM11A-203ENST00000399299 TRIM7Q9C029 511 aa15.13■□□□□ 0.01
SMIM11A-203ENST00000399299 ZDHHC6Q9H6R6 413 aa15.13■□□□□ 0.01
SMIM11A-203ENST00000399299 ERVMER34-1Q9H9K5 563 aa15.13■□□□□ 0.01
SMIM11A-203ENST00000399299 GDF3Q9NR23 364 aa15.13■□□□□ 0.01
SMIM11A-203ENST00000399299 IFNKQ9P0W0 207 aa15.13■□□□□ 0.01
SMIM11A-203ENST00000399299 LUC7L2Q9Y383 392 aaKnown RBP15.13■□□□□ 0.01
SMIM11A-203ENST00000399299 IGF2RP11717 2491 aa15.12■□□□□ 0.01
SMIM11A-203ENST00000399299 TRPM6Q9BX84 2022 aa15.12■□□□□ 0.01
SMIM11A-203ENST00000399299 A0A1W2PQU0 124 aa15.12■□□□□ 0.01
SMIM11A-203ENST00000399299 AP1G1O43747 822 aa15.12■□□□□ 0.01
SMIM11A-203ENST00000399299 LRCH4O75427 683 aa15.12■□□□□ 0.01
SMIM11A-203ENST00000399299 TMCC1O94876 653 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms