RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 THOC5Q13769 683 aaKnown RBP17.96■□□□□ 0.47
HLA-DQB1-204ENST00000399084 CES4AQ5XG92 561 aa17.96■□□□□ 0.47
HLA-DQB1-204ENST00000399084 ARHGAP36Q6ZRI8 547 aa17.96■□□□□ 0.47
HLA-DQB1-204ENST00000399084 C14orf80Q86SX3 495 aa17.96■□□□□ 0.47
HLA-DQB1-204ENST00000399084 ENDOVQ8N8Q3 282 aaKnown RBP17.96■□□□□ 0.47
HLA-DQB1-204ENST00000399084 SPATA22Q8NHS9 363 aa17.96■□□□□ 0.47
HLA-DQB1-204ENST00000399084 USP33Q8TEY7 942 aa17.96■□□□□ 0.47
HLA-DQB1-204ENST00000399084 OVCA2Q8WZ82 227 aa17.96■□□□□ 0.47
HLA-DQB1-204ENST00000399084 MCUR1Q96AQ8 359 aa17.96■□□□□ 0.47
HLA-DQB1-204ENST00000399084 MRGPRX2Q96LB1 330 aa17.96■□□□□ 0.47
HLA-DQB1-204ENST00000399084 ZNF599Q96NL3 588 aa17.96■□□□□ 0.47
HLA-DQB1-204ENST00000399084 CASD1Q96PB1 797 aa17.96■□□□□ 0.47
HLA-DQB1-204ENST00000399084 APOL2Q9BQE5 337 aa17.96■□□□□ 0.47
HLA-DQB1-204ENST00000399084 C20orf27Q9GZN8 174 aa17.96■□□□□ 0.47
HLA-DQB1-204ENST00000399084 RNPEPL1Q9HAU8 725 aa17.96■□□□□ 0.47
HLA-DQB1-204ENST00000399084 TAS2R1Q9NYW7 299 aa17.96■□□□□ 0.47
HLA-DQB1-204ENST00000399084 LRFN2Q9ULH4 789 aa17.96■□□□□ 0.47
HLA-DQB1-204ENST00000399084 ACOT9Q9Y305 439 aa17.96■□□□□ 0.47
HLA-DQB1-204ENST00000399084 SLCO1B7G3V0H7 640 aa17.95■□□□□ 0.46
HLA-DQB1-204ENST00000399084 KIF3CO14782 793 aa17.95■□□□□ 0.46
HLA-DQB1-204ENST00000399084 MOCS2O96007 188 aaPredicted RBP17.95■□□□□ 0.46
HLA-DQB1-204ENST00000399084 PEX11BO96011 259 aa17.95■□□□□ 0.46
HLA-DQB1-204ENST00000399084 EPOP01588 193 aa17.95■□□□□ 0.46
HLA-DQB1-204ENST00000399084 PGFP49763 221 aa17.95■□□□□ 0.46
HLA-DQB1-204ENST00000399084 GTF2A1P52655 376 aaPredicted RBP17.95■□□□□ 0.46
HLA-DQB1-204ENST00000399084 CAP1Q01518 475 aa17.95■□□□□ 0.46
HLA-DQB1-204ENST00000399084 POU4F1Q01851 419 aa17.95■□□□□ 0.46
HLA-DQB1-204ENST00000399084 USP10Q14694 798 aaKnown RBP17.95■□□□□ 0.46
HLA-DQB1-204ENST00000399084 SLC14A2Q15849 920 aa17.95■□□□□ 0.46
HLA-DQB1-204ENST00000399084 DEFB115Q30KQ5 88 aa17.95■□□□□ 0.46
HLA-DQB1-204ENST00000399084 HSF5Q4G112 596 aaPredicted RBP17.95■□□□□ 0.46
HLA-DQB1-204ENST00000399084 KDELC1Q6UW63 502 aa17.95■□□□□ 0.46
HLA-DQB1-204ENST00000399084 CCDC106Q9BWC9 280 aa17.95■□□□□ 0.46
HLA-DQB1-204ENST00000399084 CADM1Q9BY67 442 aaKnown RBP17.95■□□□□ 0.46
HLA-DQB1-204ENST00000399084 NOL6Q9H6R4 1146 aaKnown RBP17.95■□□□□ 0.46
HLA-DQB1-204ENST00000399084 DCLRE1BQ9H816 532 aa17.95■□□□□ 0.46
HLA-DQB1-204ENST00000399084 OXSMQ9NWU1 459 aa17.95■□□□□ 0.46
HLA-DQB1-204ENST00000399084 NUMBLQ9Y6R0 609 aa17.95■□□□□ 0.46
HLA-DQB1-204ENST00000399084 MYO16Q9Y6X6 1858 aa17.95■□□□□ 0.46
HLA-DQB1-204ENST00000399084 A0A087X1B8 175 aa17.95■□□□□ 0.46
HLA-DQB1-204ENST00000399084 SPECC1L-ADORA2AF8WAN1 911 aa17.95■□□□□ 0.46
HLA-DQB1-204ENST00000399084 G3V2L1 256 aa17.95■□□□□ 0.46
HLA-DQB1-204ENST00000399084 MT-CYBP00156 380 aaPredicted RBP17.95■□□□□ 0.46
HLA-DQB1-204ENST00000399084 INHAP05111 366 aa17.95■□□□□ 0.46
HLA-DQB1-204ENST00000399084 HOXB8P17481 243 aaPredicted RBP17.95■□□□□ 0.46
HLA-DQB1-204ENST00000399084 SERPINB5P36952 375 aa17.95■□□□□ 0.46
HLA-DQB1-204ENST00000399084 PBX3P40426 434 aa17.95■□□□□ 0.46
HLA-DQB1-204ENST00000399084 WNT3AP56704 352 aa17.95■□□□□ 0.46
HLA-DQB1-204ENST00000399084 EFEMP1Q12805 493 aa17.95■□□□□ 0.46
HLA-DQB1-204ENST00000399084 C5orf22Q49AR2 442 aa17.95■□□□□ 0.46
HLA-DQB1-204ENST00000399084 ZYG11AQ6WRX3 759 aa17.95■□□□□ 0.46
HLA-DQB1-204ENST00000399084 CMC1Q7Z7K0 106 aa17.95■□□□□ 0.46
HLA-DQB1-204ENST00000399084 TEX9Q8N6V9 391 aa17.95■□□□□ 0.46
HLA-DQB1-204ENST00000399084 C2CD4AQ8NCU7 369 aaPredicted RBP17.95■□□□□ 0.46
HLA-DQB1-204ENST00000399084 PDZD8Q8NEN9 1154 aa17.95■□□□□ 0.46
HLA-DQB1-204ENST00000399084 CD99L2Q8TCZ2 262 aa17.95■□□□□ 0.46
HLA-DQB1-204ENST00000399084 TADA1Q96BN2 335 aa17.95■□□□□ 0.46
HLA-DQB1-204ENST00000399084 CAPNS2Q96L46 248 aa17.95■□□□□ 0.46
HLA-DQB1-204ENST00000399084 TTLL2Q9BWV7 592 aa17.95■□□□□ 0.46
HLA-DQB1-204ENST00000399084 SP110Q9HB58 689 aa17.95■□□□□ 0.46
HLA-DQB1-204ENST00000399084 MPP6Q9NZW5 540 aa17.95■□□□□ 0.46
HLA-DQB1-204ENST00000399084 HSFX1Q9UBD0 423 aa17.95■□□□□ 0.46
HLA-DQB1-204ENST00000399084 SLC39A10Q9ULF5 831 aa17.95■□□□□ 0.46
HLA-DQB1-204ENST00000399084 MAGED2Q9UNF1 606 aaPredicted RBP17.95■□□□□ 0.46
HLA-DQB1-204ENST00000399084 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.95■□□□□ 0.46
HLA-DQB1-204ENST00000399084 MTMR11A4FU01 709 aa17.94■□□□□ 0.46
HLA-DQB1-204ENST00000399084 VAPBO95292 243 aa17.94■□□□□ 0.46
HLA-DQB1-204ENST00000399084 AHSGP02765 367 aa17.94■□□□□ 0.46
HLA-DQB1-204ENST00000399084 CPB1P15086 417 aa17.94■□□□□ 0.46
HLA-DQB1-204ENST00000399084 STMN1P16949 149 aa17.94■□□□□ 0.46
HLA-DQB1-204ENST00000399084 GRK4P32298 578 aa17.94■□□□□ 0.46
HLA-DQB1-204ENST00000399084 SERPINH1P50454 418 aaKnown RBP17.94■□□□□ 0.46
HLA-DQB1-204ENST00000399084 RAP1GDS1P52306 607 aa17.94■□□□□ 0.46
HLA-DQB1-204ENST00000399084 RAB10P61026 200 aa17.94■□□□□ 0.46
HLA-DQB1-204ENST00000399084 IRX4P78413 519 aa17.94■□□□□ 0.46
HLA-DQB1-204ENST00000399084 GRM3Q14832 879 aa17.94■□□□□ 0.46
HLA-DQB1-204ENST00000399084 FSCBQ5H9T9 825 aa17.94■□□□□ 0.46
HLA-DQB1-204ENST00000399084 FUT10Q6P4F1 479 aa17.94■□□□□ 0.46
HLA-DQB1-204ENST00000399084 ZCCHC23Q6ZST2 131 aa17.94■□□□□ 0.46
HLA-DQB1-204ENST00000399084 RAPH1Q70E73 1250 aa17.94■□□□□ 0.46
HLA-DQB1-204ENST00000399084 NPAS4Q8IUM7 802 aa17.94■□□□□ 0.46
HLA-DQB1-204ENST00000399084 KIRREL3Q8IZU9 778 aa17.94■□□□□ 0.46
HLA-DQB1-204ENST00000399084 ATAD1Q8NBU5 361 aa17.94■□□□□ 0.46
HLA-DQB1-204ENST00000399084 PDCD6IPQ8WUM4 868 aaKnown RBP17.94■□□□□ 0.46
HLA-DQB1-204ENST00000399084 SORT1Q99523 831 aa17.94■□□□□ 0.46
HLA-DQB1-204ENST00000399084 ILKAPQ9H0C8 392 aaPredicted RBP17.94■□□□□ 0.46
HLA-DQB1-204ENST00000399084 MRGBPQ9NV56 204 aa17.94■□□□□ 0.46
HLA-DQB1-204ENST00000399084 NDFIP2Q9NV92 336 aa17.94■□□□□ 0.46
HLA-DQB1-204ENST00000399084 RIMKLBQ9ULI2 386 aa17.94■□□□□ 0.46
HLA-DQB1-204ENST00000399084 SLC7A4O43246 635 aa17.93■□□□□ 0.46
HLA-DQB1-204ENST00000399084 ITM2AO43736 263 aa17.93■□□□□ 0.46
HLA-DQB1-204ENST00000399084 RAMP2O60895 175 aa17.93■□□□□ 0.46
HLA-DQB1-204ENST00000399084 PMPCBO75439 489 aa17.93■□□□□ 0.46
HLA-DQB1-204ENST00000399084 TOP3BO95985 862 aaKnown RBP17.93■□□□□ 0.46
HLA-DQB1-204ENST00000399084 PRDX6P30041 224 aa17.93■□□□□ 0.46
HLA-DQB1-204ENST00000399084 SLC26A3P40879 764 aa17.93■□□□□ 0.46
HLA-DQB1-204ENST00000399084 CD151P48509 253 aa17.93■□□□□ 0.46
HLA-DQB1-204ENST00000399084 TUFMP49411 452 aaKnown RBP17.93■□□□□ 0.46
HLA-DQB1-204ENST00000399084 APLP1P51693 650 aa17.93■□□□□ 0.46
HLA-DQB1-204ENST00000399084 USP46P62068 366 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms