RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 C7P10643 843 aa25.8■■□□□ 1.72
TSPAN4-207ENST00000397411 DPP6P42658 865 aa25.8■■□□□ 1.72
TSPAN4-207ENST00000397411 CCNHP51946 323 aaPredicted RBP25.8■■□□□ 1.72
TSPAN4-207ENST00000397411 IL10RBQ08334 325 aa25.8■■□□□ 1.72
TSPAN4-207ENST00000397411 CCDC6Q16204 474 aa25.8■■□□□ 1.72
TSPAN4-207ENST00000397411 WDR45BQ5MNZ6 344 aa25.8■■□□□ 1.72
TSPAN4-207ENST00000397411 PLPP6Q8IY26 295 aa25.8■■□□□ 1.72
TSPAN4-207ENST00000397411 CADM4Q8NFZ8 388 aa25.8■■□□□ 1.72
TSPAN4-207ENST00000397411 OR2AP1Q8NGE2 309 aa25.8■■□□□ 1.72
TSPAN4-207ENST00000397411 NSMCE1Q8WV22 266 aa25.8■■□□□ 1.72
TSPAN4-207ENST00000397411 ZNF419Q96HQ0 510 aaPredicted RBP25.8■■□□□ 1.72
TSPAN4-207ENST00000397411 GDAP1L1Q96MZ0 367 aa25.8■■□□□ 1.72
TSPAN4-207ENST00000397411 LACRTQ9GZZ8 138 aa25.8■■□□□ 1.72
TSPAN4-207ENST00000397411 SARDHQ9UL12 918 aa25.8■■□□□ 1.72
TSPAN4-207ENST00000397411 FZD4Q9ULV1 537 aa25.8■■□□□ 1.72
TSPAN4-207ENST00000397411 SBDSQ9Y3A5 250 aaKnown RBP eCLIP25.8■■□□□ 1.72
TSPAN4-207ENST00000397411 LRRC72A6NJI9 287 aa25.79■■□□□ 1.72
TSPAN4-207ENST00000397411 BTNL10A8MVZ5 291 aa25.79■■□□□ 1.72
TSPAN4-207ENST00000397411 KRIT1O00522 736 aa25.79■■□□□ 1.72
TSPAN4-207ENST00000397411 PJA2O43164 708 aa25.79■■□□□ 1.72
TSPAN4-207ENST00000397411 LRP3O75074 770 aa25.79■■□□□ 1.72
TSPAN4-207ENST00000397411 ZNF821O75541 412 aaPredicted RBP25.79■■□□□ 1.72
TSPAN4-207ENST00000397411 POP4O95707 220 aaKnown RBP25.79■■□□□ 1.72
TSPAN4-207ENST00000397411 HOXD11P31277 338 aaPredicted RBP25.79■■□□□ 1.72
TSPAN4-207ENST00000397411 MPLP40238 635 aa25.79■■□□□ 1.72
TSPAN4-207ENST00000397411 MYLK3Q32MK0 819 aa25.79■■□□□ 1.72
TSPAN4-207ENST00000397411 C11orf63Q6NUN7 778 aa25.79■■□□□ 1.72
TSPAN4-207ENST00000397411 ATPAF2Q8N5M1 289 aa25.79■■□□□ 1.72
TSPAN4-207ENST00000397411 AADATQ8N5Z0 425 aa25.79■■□□□ 1.72
TSPAN4-207ENST00000397411 OR14C36Q8NHC7 312 aa25.79■■□□□ 1.72
TSPAN4-207ENST00000397411 PCDH19Q8TAB3 1148 aa25.79■■□□□ 1.72
TSPAN4-207ENST00000397411 RNF25Q96BH1 459 aaPredicted RBP25.79■■□□□ 1.72
TSPAN4-207ENST00000397411 PPP1R16AQ96I34 528 aa25.79■■□□□ 1.72
TSPAN4-207ENST00000397411 GOLPH3Q9H4A6 298 aa25.79■■□□□ 1.72
TSPAN4-207ENST00000397411 GON4LQ3T8J9 2241 aa25.78■■□□□ 1.72
TSPAN4-207ENST00000397411 PLK4O00444 970 aa25.78■■□□□ 1.72
TSPAN4-207ENST00000397411 LEFTY1O75610 366 aa25.78■■□□□ 1.72
TSPAN4-207ENST00000397411 CTSLP07711 333 aa25.78■■□□□ 1.72
TSPAN4-207ENST00000397411 ITPKAP23677 461 aa25.78■■□□□ 1.72
TSPAN4-207ENST00000397411 CYTH1Q15438 398 aa25.78■■□□□ 1.72
TSPAN4-207ENST00000397411 ATXN7L2Q5T6C5 722 aaPredicted RBP25.78■■□□□ 1.72
TSPAN4-207ENST00000397411 ARHGAP36Q6ZRI8 547 aa25.78■■□□□ 1.72
TSPAN4-207ENST00000397411 TP53INP2Q8IXH6 220 aa25.78■■□□□ 1.72
TSPAN4-207ENST00000397411 KIAA2013Q8IYS2 634 aa25.78■■□□□ 1.72
TSPAN4-207ENST00000397411 OR6K2Q8NGY2 324 aa25.78■■□□□ 1.72
TSPAN4-207ENST00000397411 KIAA1524Q8TCG1 905 aa25.78■■□□□ 1.72
TSPAN4-207ENST00000397411 SNX19Q92543 992 aa25.78■■□□□ 1.72
TSPAN4-207ENST00000397411 CINPQ9BW66 212 aaPredicted RBP25.78■■□□□ 1.72
TSPAN4-207ENST00000397411 PCED1AQ9H1Q7 454 aa25.78■■□□□ 1.72
TSPAN4-207ENST00000397411 VPS45Q9NRW7 570 aa25.78■■□□□ 1.72
TSPAN4-207ENST00000397411 SEMA4GQ9NTN9 838 aa25.78■■□□□ 1.72
TSPAN4-207ENST00000397411 SERGEFQ9UGK8 458 aa25.78■■□□□ 1.72
TSPAN4-207ENST00000397411 SALL4Q9UJQ4 1053 aa25.78■■□□□ 1.72
TSPAN4-207ENST00000397411 PTPRZ1P23471 2315 aaPredicted RBP25.77■■□□□ 1.72
TSPAN4-207ENST00000397411 RIF1Q5UIP0 2472 aaKnown RBP25.77■■□□□ 1.72
TSPAN4-207ENST00000397411 METTL12A8MUP2 240 aa25.77■■□□□ 1.72
TSPAN4-207ENST00000397411 ARHGAP6O43182 974 aa25.77■■□□□ 1.72
TSPAN4-207ENST00000397411 PSTPIP1O43586 416 aa25.77■■□□□ 1.72
TSPAN4-207ENST00000397411 CNTN1Q12860 1018 aa25.77■■□□□ 1.72
TSPAN4-207ENST00000397411 RFTN1Q14699 578 aaPredicted RBP25.77■■□□□ 1.72
TSPAN4-207ENST00000397411 NUMA1Q14980 2115 aa25.77■■□□□ 1.72
TSPAN4-207ENST00000397411 DCAF12L1Q5VU92 463 aa25.77■■□□□ 1.72
TSPAN4-207ENST00000397411 RFX6Q8HWS3 928 aa25.77■■□□□ 1.72
TSPAN4-207ENST00000397411 SYT12Q8IV01 421 aa25.77■■□□□ 1.72
TSPAN4-207ENST00000397411 SLC41A1Q8IVJ1 513 aa25.77■■□□□ 1.72
TSPAN4-207ENST00000397411 LRRC8AQ8IWT6 810 aa25.77■■□□□ 1.72
TSPAN4-207ENST00000397411 C12orf50Q8NA57 414 aaPredicted RBP25.77■■□□□ 1.72
TSPAN4-207ENST00000397411 RNF157Q96PX1 679 aa25.77■■□□□ 1.72
TSPAN4-207ENST00000397411 MIR1-1HGQ9H1L0 117 aa25.77■■□□□ 1.72
TSPAN4-207ENST00000397411 C6orf106Q9H6K1 298 aaPredicted RBP25.77■■□□□ 1.72
TSPAN4-207ENST00000397411 PDFQ9HBH1 243 aa25.77■■□□□ 1.72
TSPAN4-207ENST00000397411 FAM186AA6NE01 2351 aa25.76■■□□□ 1.71
TSPAN4-207ENST00000397411 GPR179Q6PRD1 2367 aa25.76■■□□□ 1.71
TSPAN4-207ENST00000397411 TBC1D3DA0A087WVF3 549 aa25.76■■□□□ 1.71
TSPAN4-207ENST00000397411 TBC1D3IA0A087WXS9 549 aa25.76■■□□□ 1.71
TSPAN4-207ENST00000397411 TBC1D3EA0A087X179 549 aa25.76■■□□□ 1.71
TSPAN4-207ENST00000397411 TBC1D3KA0A087X1G2 549 aa25.76■■□□□ 1.71
TSPAN4-207ENST00000397411 MACROD2A1Z1Q3 448 aa25.76■■□□□ 1.71
TSPAN4-207ENST00000397411 TBC1D3FA6NER0 549 aaPredicted RBP25.76■■□□□ 1.71
TSPAN4-207ENST00000397411 TBC1D3LB9A6J9 549 aa25.76■■□□□ 1.71
TSPAN4-207ENST00000397411 FSBPO95073 299 aa25.76■■□□□ 1.71
TSPAN4-207ENST00000397411 TBC1D3HP0C7X1 549 aa25.76■■□□□ 1.71
TSPAN4-207ENST00000397411 METAP1P53582 386 aa25.76■■□□□ 1.71
TSPAN4-207ENST00000397411 PAFAH1B3Q15102 231 aaKnown RBP25.76■■□□□ 1.71
TSPAN4-207ENST00000397411 CSRP2Q16527 193 aa25.76■■□□□ 1.71
TSPAN4-207ENST00000397411 TBC1D3GQ6DHY5 549 aa25.76■■□□□ 1.71
TSPAN4-207ENST00000397411 TBC1D3CQ6IPX1 549 aa25.76■■□□□ 1.71
TSPAN4-207ENST00000397411 LRRC49Q8IUZ0 686 aa25.76■■□□□ 1.71
TSPAN4-207ENST00000397411 TBC1D3Q8IZP1 549 aaPredicted RBP25.76■■□□□ 1.71
TSPAN4-207ENST00000397411 BBS5Q8N3I7 341 aa25.76■■□□□ 1.71
TSPAN4-207ENST00000397411 LRIG1Q96JA1 1093 aa25.76■■□□□ 1.71
TSPAN4-207ENST00000397411 ZNF830Q96NB3 372 aaPredicted RBP25.76■■□□□ 1.71
TSPAN4-207ENST00000397411 ZNF599Q96NL3 588 aa25.76■■□□□ 1.71
TSPAN4-207ENST00000397411 EVLQ9UI08 416 aaPredicted RBP25.76■■□□□ 1.71
TSPAN4-207ENST00000397411 WASF2Q9Y6W5 498 aa25.76■■□□□ 1.71
TSPAN4-207ENST00000397411 OTOGLQ3ZCN5 2332 aa25.75■■□□□ 1.71
TSPAN4-207ENST00000397411 SHROOM3Q8TF72 1996 aa25.75■■□□□ 1.71
TSPAN4-207ENST00000397411 ATXN2Q99700 1313 aaKnown RBP25.75■■□□□ 1.71
TSPAN4-207ENST00000397411 SLC7A4O43246 635 aa25.75■■□□□ 1.71
TSPAN4-207ENST00000397411 GNSP15586 552 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms