RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 HINFPQ9BQA5 517 aa21.55■■□□□ 1.04
TSPAN4-206ENST00000397408 TSGA10Q9BZW7 698 aa21.55■■□□□ 1.04
TSPAN4-206ENST00000397408 IL36AQ9UHA7 158 aa21.55■■□□□ 1.04
TSPAN4-206ENST00000397408 NCKAP1Q9Y2A7 1128 aa21.55■■□□□ 1.04
TSPAN4-206ENST00000397408 USP34Q70CQ2 3546 aa21.55■■□□□ 1.04
TSPAN4-206ENST00000397408 RNASEH2AO75792 299 aaKnown RBP21.55■■□□□ 1.04
TSPAN4-206ENST00000397408 GSRP00390 522 aa21.55■■□□□ 1.04
TSPAN4-206ENST00000397408 PRNPP04156 253 aa21.55■■□□□ 1.04
TSPAN4-206ENST00000397408 DHPSP49366 369 aaPredicted RBP21.55■■□□□ 1.04
TSPAN4-206ENST00000397408 SNRPD1P62314 119 aaKnown RBP21.55■■□□□ 1.04
TSPAN4-206ENST00000397408 SFSWAPQ12872 951 aaKnown RBP21.55■■□□□ 1.04
TSPAN4-206ENST00000397408 CYTH1Q15438 398 aa21.55■■□□□ 1.04
TSPAN4-206ENST00000397408 ATXN7L2Q5T6C5 722 aaPredicted RBP21.55■■□□□ 1.04
TSPAN4-206ENST00000397408 MFSD7Q6UXD7 560 aa21.55■■□□□ 1.04
TSPAN4-206ENST00000397408 KATNAL2Q8IYT4 538 aa21.55■■□□□ 1.04
TSPAN4-206ENST00000397408 DEFB119Q8N690 84 aa21.55■■□□□ 1.04
TSPAN4-206ENST00000397408 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.55■■□□□ 1.04
TSPAN4-206ENST00000397408 GDAP1L1Q96MZ0 367 aa21.55■■□□□ 1.04
TSPAN4-206ENST00000397408 HEPHQ9BQS7 1158 aa21.55■■□□□ 1.04
TSPAN4-206ENST00000397408 GPR174Q9BXC1 333 aa21.55■■□□□ 1.04
TSPAN4-206ENST00000397408 LHX3Q9UBR4 397 aa21.55■■□□□ 1.04
TSPAN4-206ENST00000397408 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.55■■□□□ 1.04
TSPAN4-206ENST00000397408 FRYLO94915 3013 aa21.54■■□□□ 1.04
TSPAN4-206ENST00000397408 GON4LQ3T8J9 2241 aa21.54■■□□□ 1.04
TSPAN4-206ENST00000397408 WDR87Q6ZQQ6 2873 aa21.54■■□□□ 1.04
TSPAN4-206ENST00000397408 KPNA3O00505 521 aaPredicted RBP21.54■■□□□ 1.04
TSPAN4-206ENST00000397408 PALMO75781 387 aa21.54■■□□□ 1.04
TSPAN4-206ENST00000397408 MAP3K6O95382 1288 aa21.54■■□□□ 1.04
TSPAN4-206ENST00000397408 CCDC175P0C221 793 aa21.54■■□□□ 1.04
TSPAN4-206ENST00000397408 ACSL1P33121 698 aa21.54■■□□□ 1.04
TSPAN4-206ENST00000397408 DRD3P35462 400 aa21.54■■□□□ 1.04
TSPAN4-206ENST00000397408 PTGER3P43115 390 aa21.54■■□□□ 1.04
TSPAN4-206ENST00000397408 GBE1Q04446 702 aa21.54■■□□□ 1.04
TSPAN4-206ENST00000397408 RFX6Q8HWS3 928 aa21.54■■□□□ 1.04
TSPAN4-206ENST00000397408 PLPP6Q8IY26 295 aa21.54■■□□□ 1.04
TSPAN4-206ENST00000397408 HDDC3Q8N4P3 179 aa21.54■■□□□ 1.04
TSPAN4-206ENST00000397408 RUBCNQ92622 972 aa21.54■■□□□ 1.04
TSPAN4-206ENST00000397408 LOXL4Q96JB6 756 aa21.54■■□□□ 1.04
TSPAN4-206ENST00000397408 EXOC2Q96KP1 924 aa21.54■■□□□ 1.04
TSPAN4-206ENST00000397408 MAK16Q9BXY0 300 aaKnown RBP21.54■■□□□ 1.04
TSPAN4-206ENST00000397408 BTBD1Q9H0C5 482 aa21.54■■□□□ 1.04
TSPAN4-206ENST00000397408 ZDHHC6Q9H6R6 413 aa21.54■■□□□ 1.04
TSPAN4-206ENST00000397408 CAPN6Q9Y6Q1 641 aa21.54■■□□□ 1.04
TSPAN4-206ENST00000397408 WASF2Q9Y6W5 498 aa21.54■■□□□ 1.04
TSPAN4-206ENST00000397408 PLK4O00444 970 aa21.53■■□□□ 1.04
TSPAN4-206ENST00000397408 APOL1O14791 398 aa21.53■■□□□ 1.04
TSPAN4-206ENST00000397408 LEFTY1O75610 366 aa21.53■■□□□ 1.04
TSPAN4-206ENST00000397408 EPN2O95208 641 aa21.53■■□□□ 1.04
TSPAN4-206ENST00000397408 IGSF6O95976 241 aa21.53■■□□□ 1.04
TSPAN4-206ENST00000397408 RETP07949 1114 aa21.53■■□□□ 1.04
TSPAN4-206ENST00000397408 CTNNA1P35221 906 aaKnown RBP21.53■■□□□ 1.04
TSPAN4-206ENST00000397408 GALNT2Q10471 571 aa21.53■■□□□ 1.04
TSPAN4-206ENST00000397408 GSE1Q14687 1217 aa21.53■■□□□ 1.04
TSPAN4-206ENST00000397408 ARSIQ5FYB1 569 aa21.53■■□□□ 1.04
TSPAN4-206ENST00000397408 TMCO4Q5TGY1 634 aa21.53■■□□□ 1.04
TSPAN4-206ENST00000397408 PLD5Q8N7P1 536 aa21.53■■□□□ 1.04
TSPAN4-206ENST00000397408 TMIEQ8NEW7 156 aa21.53■■□□□ 1.04
TSPAN4-206ENST00000397408 NEUROG2Q9H2A3 272 aa21.53■■□□□ 1.04
TSPAN4-206ENST00000397408 FZD4Q9ULV1 537 aa21.53■■□□□ 1.04
TSPAN4-206ENST00000397408 RNF103O00237 685 aa21.52■■□□□ 1.04
TSPAN4-206ENST00000397408 KRIT1O00522 736 aa21.52■■□□□ 1.04
TSPAN4-206ENST00000397408 KRT86O43790 486 aa21.52■■□□□ 1.04
TSPAN4-206ENST00000397408 MAFKO60675 156 aa21.52■■□□□ 1.04
TSPAN4-206ENST00000397408 PTMAP06454 111 aaKnown RBP21.52■■□□□ 1.04
TSPAN4-206ENST00000397408 GKP32189 559 aa21.52■■□□□ 1.04
TSPAN4-206ENST00000397408 GARSP41250 739 aaKnown RBP21.52■■□□□ 1.04
TSPAN4-206ENST00000397408 CDKN2BP42772 138 aa21.52■■□□□ 1.04
TSPAN4-206ENST00000397408 DYNLT1P63172 113 aa21.52■■□□□ 1.04
TSPAN4-206ENST00000397408 RFTN1Q14699 578 aaPredicted RBP21.52■■□□□ 1.04
TSPAN4-206ENST00000397408 SPDYCQ5MJ68 293 aa21.52■■□□□ 1.04
TSPAN4-206ENST00000397408 LYSMD4Q5XG99 296 aa21.52■■□□□ 1.04
TSPAN4-206ENST00000397408 SLC9A4Q6AI14 798 aa21.52■■□□□ 1.04
TSPAN4-206ENST00000397408 SPOCD1Q6ZMY3 1216 aa21.52■■□□□ 1.04
TSPAN4-206ENST00000397408 CYP2U1Q7Z449 544 aa21.52■■□□□ 1.04
TSPAN4-206ENST00000397408 ALYREFQ86V81 257 aaKnown RBP21.52■■□□□ 1.04
TSPAN4-206ENST00000397408 CCDC50Q8IVM0 306 aa21.52■■□□□ 1.04
TSPAN4-206ENST00000397408 SYCE1Q8N0S2 351 aa21.52■■□□□ 1.04
TSPAN4-206ENST00000397408 DCLK2Q8N568 766 aa21.52■■□□□ 1.04
TSPAN4-206ENST00000397408 HSPA12BQ96MM6 686 aa21.52■■□□□ 1.04
TSPAN4-206ENST00000397408 ZNF599Q96NL3 588 aa21.52■■□□□ 1.04
TSPAN4-206ENST00000397408 CINPQ9BW66 212 aaPredicted RBP21.52■■□□□ 1.04
TSPAN4-206ENST00000397408 SGK2Q9HBY8 427 aa21.52■■□□□ 1.04
TSPAN4-206ENST00000397408 GUCA1BQ9UMX6 200 aa21.52■■□□□ 1.04
TSPAN4-206ENST00000397408 GVINP1Q7Z2Y8 2422 aa21.52■■□□□ 1.04
TSPAN4-206ENST00000397408 SHROOM3Q8TF72 1996 aa21.52■■□□□ 1.03
TSPAN4-206ENST00000397408 CEP192Q8TEP8 1941 aa21.51■■□□□ 1.03
TSPAN4-206ENST00000397408 PTPRZ1P23471 2315 aaPredicted RBP21.51■■□□□ 1.03
TSPAN4-206ENST00000397408 ZRANB2O95218 330 aaKnown RBP eCLIP21.51■■□□□ 1.03
TSPAN4-206ENST00000397408 SEMA4FO95754 770 aa21.51■■□□□ 1.03
TSPAN4-206ENST00000397408 PEX11BO96011 259 aa21.51■■□□□ 1.03
TSPAN4-206ENST00000397408 CTNNA2P26232 953 aa21.51■■□□□ 1.03
TSPAN4-206ENST00000397408 CREB5Q02930 508 aa21.51■■□□□ 1.03
TSPAN4-206ENST00000397408 ZNF33AQ06730 810 aa21.51■■□□□ 1.03
TSPAN4-206ENST00000397408 CNTN1Q12860 1018 aa21.51■■□□□ 1.03
TSPAN4-206ENST00000397408 LBRQ14739 615 aaKnown RBP21.51■■□□□ 1.03
TSPAN4-206ENST00000397408 LLGL1Q15334 1064 aa21.51■■□□□ 1.03
TSPAN4-206ENST00000397408 MYLK3Q32MK0 819 aa21.51■■□□□ 1.03
TSPAN4-206ENST00000397408 PEX26Q7Z412 305 aa21.51■■□□□ 1.03
TSPAN4-206ENST00000397408 NT5DC3Q86UY8 548 aa21.51■■□□□ 1.03
TSPAN4-206ENST00000397408 LRRC49Q8IUZ0 686 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms