RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 SPECC1L-ADORA2AF8WAN1 911 aa23.94■■□□□ 1.42
TSPAN4-202ENST00000397396 KAT7O95251 611 aa23.94■■□□□ 1.42
TSPAN4-202ENST00000397396 ASGR2P07307 311 aa23.94■■□□□ 1.42
TSPAN4-202ENST00000397396 IVDP26440 423 aa23.94■■□□□ 1.42
TSPAN4-202ENST00000397396 PSMB4P28070 264 aa23.94■■□□□ 1.42
TSPAN4-202ENST00000397396 CTHP32929 405 aa23.94■■□□□ 1.42
TSPAN4-202ENST00000397396 MAGEA6P43360 314 aa23.94■■□□□ 1.42
TSPAN4-202ENST00000397396 ZP2Q05996 745 aa23.94■■□□□ 1.42
TSPAN4-202ENST00000397396 ITKQ08881 620 aa23.94■■□□□ 1.42
TSPAN4-202ENST00000397396 NSUN2Q08J23 767 aaKnown RBP eCLIP23.94■■□□□ 1.42
TSPAN4-202ENST00000397396 LINGO4Q6UY18 593 aa23.94■■□□□ 1.42
TSPAN4-202ENST00000397396 LEKR1Q6ZMV7 388 aa23.94■■□□□ 1.42
TSPAN4-202ENST00000397396 PHTF2Q8N3S3 785 aa23.94■■□□□ 1.42
TSPAN4-202ENST00000397396 SH2D3CQ8N5H7 860 aa23.94■■□□□ 1.42
TSPAN4-202ENST00000397396 ATXN2LQ8WWM7 1075 aaKnown RBP23.94■■□□□ 1.42
TSPAN4-202ENST00000397396 P2RY13Q9BPV8 354 aa23.94■■□□□ 1.42
TSPAN4-202ENST00000397396 FRMD8Q9BZ67 464 aaPredicted RBP23.94■■□□□ 1.42
TSPAN4-202ENST00000397396 VPS45Q9NRW7 570 aa23.94■■□□□ 1.42
TSPAN4-202ENST00000397396 ANAPC5Q9UJX4 755 aa23.94■■□□□ 1.42
TSPAN4-202ENST00000397396 PLA2G4CQ9UP65 541 aa23.94■■□□□ 1.42
TSPAN4-202ENST00000397396 ERVW-1Q9UQF0 538 aa23.94■■□□□ 1.42
TSPAN4-202ENST00000397396 NPC1O15118 1278 aa23.93■■□□□ 1.42
TSPAN4-202ENST00000397396 TPSB2P20231 275 aa23.93■■□□□ 1.42
TSPAN4-202ENST00000397396 CD68P34810 354 aaPredicted RBP23.93■■□□□ 1.42
TSPAN4-202ENST00000397396 LMAN1P49257 510 aa23.93■■□□□ 1.42
TSPAN4-202ENST00000397396 GEMP55040 296 aa23.93■■□□□ 1.42
TSPAN4-202ENST00000397396 SARNPP82979 210 aaKnown RBP23.93■■□□□ 1.42
TSPAN4-202ENST00000397396 HLTFQ14527 1009 aaKnown RBP eCLIP23.93■■□□□ 1.42
TSPAN4-202ENST00000397396 CYTH1Q15438 398 aa23.93■■□□□ 1.42
TSPAN4-202ENST00000397396 TPSAB1Q15661 275 aa23.93■■□□□ 1.42
TSPAN4-202ENST00000397396 RNASEH2BQ5TBB1 312 aaKnown RBP23.93■■□□□ 1.42
TSPAN4-202ENST00000397396 PPP1R21Q6ZMI0 780 aa23.93■■□□□ 1.42
TSPAN4-202ENST00000397396 PCDH20Q8N6Y1 951 aaKnown RBP23.93■■□□□ 1.42
TSPAN4-202ENST00000397396 FOXP3Q9BZS1 431 aa23.93■■□□□ 1.42
TSPAN4-202ENST00000397396 TSPYL1Q9H0U9 437 aa23.93■■□□□ 1.42
TSPAN4-202ENST00000397396 ETNK1Q9HBU6 452 aa23.93■■□□□ 1.42
TSPAN4-202ENST00000397396 MTRF1LQ9UGC7 380 aaKnown RBP23.93■■□□□ 1.42
TSPAN4-202ENST00000397396 DUSP12Q9UNI6 340 aa23.93■■□□□ 1.42
TSPAN4-202ENST00000397396 PIAS3Q9Y6X2 628 aa23.93■■□□□ 1.42
TSPAN4-202ENST00000397396 TICRRQ7Z2Z1 1910 aa23.93■■□□□ 1.42
TSPAN4-202ENST00000397396 ESYT3A0FGR9 886 aa23.92■■□□□ 1.42
TSPAN4-202ENST00000397396 TRIM24O15164 1050 aa23.92■■□□□ 1.42
TSPAN4-202ENST00000397396 METTL18O95568 372 aa23.92■■□□□ 1.42
TSPAN4-202ENST00000397396 CD160O95971 181 aa23.92■■□□□ 1.42
TSPAN4-202ENST00000397396 SRCP12931 536 aa23.92■■□□□ 1.42
TSPAN4-202ENST00000397396 NUMBP49757 651 aa23.92■■□□□ 1.42
TSPAN4-202ENST00000397396 MPP3Q13368 585 aa23.92■■□□□ 1.42
TSPAN4-202ENST00000397396 TMEM215Q68D42 235 aa23.92■■□□□ 1.42
TSPAN4-202ENST00000397396 HIBCHQ6NVY1 386 aaPredicted RBP23.92■■□□□ 1.42
TSPAN4-202ENST00000397396 CEP128Q6ZU80 1094 aa23.92■■□□□ 1.42
TSPAN4-202ENST00000397396 IFT81Q8WYA0 676 aa23.92■■□□□ 1.42
TSPAN4-202ENST00000397396 CPT1BQ92523 772 aa23.92■■□□□ 1.42
TSPAN4-202ENST00000397396 IMP4Q96G21 291 aaKnown RBP23.92■■□□□ 1.42
TSPAN4-202ENST00000397396 NUDCD1Q96RS6 583 aa23.92■■□□□ 1.42
TSPAN4-202ENST00000397396 GRHL1Q9NZI5 618 aa23.92■■□□□ 1.42
TSPAN4-202ENST00000397396 RAB21Q9UL25 225 aa23.92■■□□□ 1.42
TSPAN4-202ENST00000397396 FARP1Q9Y4F1 1045 aaPredicted RBP23.92■■□□□ 1.42
TSPAN4-202ENST00000397396 COL4A2P08572 1712 aa23.92■■□□□ 1.42
TSPAN4-202ENST00000397396 AP3B1O00203 1094 aa23.91■■□□□ 1.42
TSPAN4-202ENST00000397396 ATP9BO43861 1147 aa23.91■■□□□ 1.42
TSPAN4-202ENST00000397396 IGSF6O95976 241 aa23.91■■□□□ 1.42
TSPAN4-202ENST00000397396 GSRP00390 522 aa23.91■■□□□ 1.42
TSPAN4-202ENST00000397396 APRTP07741 180 aa23.91■■□□□ 1.42
TSPAN4-202ENST00000397396 CA4P22748 312 aa23.91■■□□□ 1.42
TSPAN4-202ENST00000397396 TNFRSF4P43489 277 aa23.91■■□□□ 1.42
TSPAN4-202ENST00000397396 TNNT3P45378 269 aaPredicted RBP23.91■■□□□ 1.42
TSPAN4-202ENST00000397396 CSNK1DP48730 415 aa23.91■■□□□ 1.42
TSPAN4-202ENST00000397396 ITGA8P53708 1063 aa23.91■■□□□ 1.42
TSPAN4-202ENST00000397396 AP1S1P61966 158 aa23.91■■□□□ 1.42
TSPAN4-202ENST00000397396 SNRPD1P62314 119 aaKnown RBP23.91■■□□□ 1.42
TSPAN4-202ENST00000397396 KCNJ11Q14654 390 aa23.91■■□□□ 1.42
TSPAN4-202ENST00000397396 C22orf39Q6P5X5 142 aa23.91■■□□□ 1.42
TSPAN4-202ENST00000397396 KLHDC8BQ8IXV7 354 aa23.91■■□□□ 1.42
TSPAN4-202ENST00000397396 PLPP6Q8IY26 295 aa23.91■■□□□ 1.42
TSPAN4-202ENST00000397396 TSEN2Q8NCE0 465 aaKnown RBP23.91■■□□□ 1.42
TSPAN4-202ENST00000397396 ART4Q93070 314 aa23.91■■□□□ 1.42
TSPAN4-202ENST00000397396 ZNF419Q96HQ0 510 aaPredicted RBP23.91■■□□□ 1.42
TSPAN4-202ENST00000397396 GDAP1L1Q96MZ0 367 aa23.91■■□□□ 1.42
TSPAN4-202ENST00000397396 PARD6BQ9BYG5 372 aa23.91■■□□□ 1.42
TSPAN4-202ENST00000397396 LRRC40Q9H9A6 602 aa23.91■■□□□ 1.42
TSPAN4-202ENST00000397396 LHX3Q9UBR4 397 aa23.91■■□□□ 1.42
TSPAN4-202ENST00000397396 FAM153AQ9UHL3 310 aa23.91■■□□□ 1.42
TSPAN4-202ENST00000397396 SORCS3Q9UPU3 1222 aa23.91■■□□□ 1.42
TSPAN4-202ENST00000397396 FCF1Q9Y324 198 aaKnown RBP23.91■■□□□ 1.42
TSPAN4-202ENST00000397396 UQCRHLA0A096LP55 91 aa23.9■■□□□ 1.42
TSPAN4-202ENST00000397396 MT-CO1P00395 513 aa23.9■■□□□ 1.42
TSPAN4-202ENST00000397396 UQCRHP07919 91 aa23.9■■□□□ 1.42
TSPAN4-202ENST00000397396 SERPINF2P08697 491 aa23.9■■□□□ 1.42
TSPAN4-202ENST00000397396 DRD1P21728 446 aa23.9■■□□□ 1.42
TSPAN4-202ENST00000397396 CTSOP43234 321 aaPredicted RBP23.9■■□□□ 1.42
TSPAN4-202ENST00000397396 SOX9P48436 509 aa23.9■■□□□ 1.42
TSPAN4-202ENST00000397396 MAP9Q49MG5 647 aa23.9■■□□□ 1.42
TSPAN4-202ENST00000397396 PGBD5Q8N414 524 aa23.9■■□□□ 1.42
TSPAN4-202ENST00000397396 NAT8LQ8N9F0 302 aa23.9■■□□□ 1.42
TSPAN4-202ENST00000397396 CHFRQ96EP1 664 aa23.9■■□□□ 1.42
TSPAN4-202ENST00000397396 RPL10LQ96L21 214 aaKnown RBP23.9■■□□□ 1.42
TSPAN4-202ENST00000397396 SEMA3CQ99985 751 aa23.9■■□□□ 1.42
TSPAN4-202ENST00000397396 SCUBE2Q9NQ36 999 aa23.9■■□□□ 1.42
TSPAN4-202ENST00000397396 STARD13Q9Y3M8 1113 aa23.9■■□□□ 1.42
TSPAN4-202ENST00000397396 C19orf67A6NJJ6 358 aa23.89■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms