RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 LMX1AQ8TE12 382 aa9.65□□□□□ -0.86
NEDD9-203ENST00000397378 GLMNQ92990 594 aa9.65□□□□□ -0.86
NEDD9-203ENST00000397378 ALG14Q96F25 216 aa9.65□□□□□ -0.86
NEDD9-203ENST00000397378 NOX5Q96PH1 765 aa9.65□□□□□ -0.86
NEDD9-203ENST00000397378 GPR27Q9NS67 375 aa9.65□□□□□ -0.86
NEDD9-203ENST00000397378 FOXJ2Q9P0K8 574 aa9.65□□□□□ -0.86
NEDD9-203ENST00000397378 MAPK8IP1Q9UQF2 711 aa9.65□□□□□ -0.86
NEDD9-203ENST00000397378 NAALADL1Q9UQQ1 740 aa9.65□□□□□ -0.86
NEDD9-203ENST00000397378 LOXL2Q9Y4K0 774 aa9.65□□□□□ -0.86
NEDD9-203ENST00000397378 CSNK1G3Q9Y6M4 447 aa9.65□□□□□ -0.86
NEDD9-203ENST00000397378 CENPEQ02224 2701 aa9.65□□□□□ -0.86
NEDD9-203ENST00000397378 A0A1W2PQ27 194 aa9.64□□□□□ -0.87
NEDD9-203ENST00000397378 A0A1W2PQ64 194 aa9.64□□□□□ -0.87
NEDD9-203ENST00000397378 A0A1W2PQC6 194 aa9.64□□□□□ -0.87
NEDD9-203ENST00000397378 PRR19A6NJB7 356 aa9.64□□□□□ -0.87
NEDD9-203ENST00000397378 F5H5T6 163 aa9.64□□□□□ -0.87
NEDD9-203ENST00000397378 M0QYV0 167 aa9.64□□□□□ -0.87
NEDD9-203ENST00000397378 NTN3O00634 580 aaPredicted RBP9.64□□□□□ -0.87
NEDD9-203ENST00000397378 IGLV3-25P01717 112 aa9.64□□□□□ -0.87
NEDD9-203ENST00000397378 PRKCGP05129 697 aa9.64□□□□□ -0.87
NEDD9-203ENST00000397378 ZNF18P17022 549 aa9.64□□□□□ -0.87
NEDD9-203ENST00000397378 NOS2P35228 1153 aa9.64□□□□□ -0.87
NEDD9-203ENST00000397378 EIF4EBP2Q13542 120 aaPredicted RBP9.64□□□□□ -0.87
NEDD9-203ENST00000397378 DLG2Q15700 870 aa9.64□□□□□ -0.87
NEDD9-203ENST00000397378 ACCSLQ4AC99 568 aa9.64□□□□□ -0.87
NEDD9-203ENST00000397378 ZC3H12AQ5D1E8 599 aaKnown RBP9.64□□□□□ -0.87
NEDD9-203ENST00000397378 C1QL3Q5VWW1 255 aa9.64□□□□□ -0.87
NEDD9-203ENST00000397378 GCNT7Q6ZNI0 430 aa9.64□□□□□ -0.87
NEDD9-203ENST00000397378 Q6ZVU0 165 aa9.64□□□□□ -0.87
NEDD9-203ENST00000397378 DTX1Q86Y01 620 aa9.64□□□□□ -0.87
NEDD9-203ENST00000397378 FAM114A1Q8IWE2 563 aa9.64□□□□□ -0.87
NEDD9-203ENST00000397378 SH2D3CQ8N5H7 860 aa9.64□□□□□ -0.87
NEDD9-203ENST00000397378 ATP6V0D2Q8N8Y2 350 aa9.64□□□□□ -0.87
NEDD9-203ENST00000397378 TEX19Q8NA77 164 aa9.64□□□□□ -0.87
NEDD9-203ENST00000397378 USP7Q93009 1102 aa9.64□□□□□ -0.87
NEDD9-203ENST00000397378 FAM149B1Q96BN6 582 aa9.64□□□□□ -0.87
NEDD9-203ENST00000397378 ABHD17AQ96GS6 310 aa9.64□□□□□ -0.87
NEDD9-203ENST00000397378 CATSPER2Q96P56 530 aa9.64□□□□□ -0.87
NEDD9-203ENST00000397378 GFM1Q96RP9 751 aaKnown RBP9.64□□□□□ -0.87
NEDD9-203ENST00000397378 PRMT1Q99873 361 aaKnown RBP9.64□□□□□ -0.87
NEDD9-203ENST00000397378 ZSWIM1Q9BR11 485 aa9.64□□□□□ -0.87
NEDD9-203ENST00000397378 TRIM62Q9BVG3 475 aa9.64□□□□□ -0.87
NEDD9-203ENST00000397378 MIS12Q9H081 205 aa9.64□□□□□ -0.87
NEDD9-203ENST00000397378 FOXD4L1Q9NU39 408 aa9.64□□□□□ -0.87
NEDD9-203ENST00000397378 SLC25A13Q9UJS0 675 aa9.64□□□□□ -0.87
NEDD9-203ENST00000397378 RCOR1Q9UKL0 485 aa9.64□□□□□ -0.87
NEDD9-203ENST00000397378 CFAP45Q9UL16 551 aa9.64□□□□□ -0.87
NEDD9-203ENST00000397378 HS3ST3A1Q9Y663 406 aa9.64□□□□□ -0.87
NEDD9-203ENST00000397378 POLQO75417 2590 aa9.64□□□□□ -0.87
NEDD9-203ENST00000397378 A0A1B0GVL5 298 aa9.63□□□□□ -0.87
NEDD9-203ENST00000397378 A6NNZ2 444 aa9.63□□□□□ -0.87
NEDD9-203ENST00000397378 KCNU1A8MYU2 1149 aa9.63□□□□□ -0.87
NEDD9-203ENST00000397378 D6RAR5 112 aa9.63□□□□□ -0.87
NEDD9-203ENST00000397378 TPP1O14773 563 aa9.63□□□□□ -0.87
NEDD9-203ENST00000397378 CETN3O15182 167 aa9.63□□□□□ -0.87
NEDD9-203ENST00000397378 CSF2P04141 144 aa9.63□□□□□ -0.87
NEDD9-203ENST00000397378 CTSLP07711 333 aa9.63□□□□□ -0.87
NEDD9-203ENST00000397378 NME1P15531 152 aaKnown RBP9.63□□□□□ -0.87
NEDD9-203ENST00000397378 PFKFB1P16118 471 aa9.63□□□□□ -0.87
NEDD9-203ENST00000397378 JUNDP17535 347 aa9.63□□□□□ -0.87
NEDD9-203ENST00000397378 CMA1P23946 247 aa9.63□□□□□ -0.87
NEDD9-203ENST00000397378 ETV5P41161 510 aa9.63□□□□□ -0.87
NEDD9-203ENST00000397378 ATP1A2P50993 1020 aa9.63□□□□□ -0.87
NEDD9-203ENST00000397378 DPYDQ12882 1025 aa9.63□□□□□ -0.87
NEDD9-203ENST00000397378 TMEM259Q4ZIN3 620 aa9.63□□□□□ -0.87
NEDD9-203ENST00000397378 RABGAP1LQ5R372 815 aa9.63□□□□□ -0.87
NEDD9-203ENST00000397378 TCERG1LQ5VWI1 586 aa9.63□□□□□ -0.87
NEDD9-203ENST00000397378 SYPL2Q5VXT5 272 aa9.63□□□□□ -0.87
NEDD9-203ENST00000397378 TMEM270Q6UE05 265 aa9.63□□□□□ -0.87
NEDD9-203ENST00000397378 KYAT3Q6YP21 454 aaKnown RBP9.63□□□□□ -0.87
NEDD9-203ENST00000397378 Q6ZSR6 202 aa9.63□□□□□ -0.87
NEDD9-203ENST00000397378 PARGQ86W56 976 aa9.63□□□□□ -0.87
NEDD9-203ENST00000397378 SLC35F3Q8IY50 421 aa9.63□□□□□ -0.87
NEDD9-203ENST00000397378 IL22RA1Q8N6P7 574 aa9.63□□□□□ -0.87
NEDD9-203ENST00000397378 TMIEQ8NEW7 156 aa9.63□□□□□ -0.87
NEDD9-203ENST00000397378 BMFQ96LC9 184 aa9.63□□□□□ -0.87
NEDD9-203ENST00000397378 TMEM74Q96NL1 305 aa9.63□□□□□ -0.87
NEDD9-203ENST00000397378 FEM1AQ9BSK4 669 aa9.63□□□□□ -0.87
NEDD9-203ENST00000397378 BOCQ9BWV1 1114 aa9.63□□□□□ -0.87
NEDD9-203ENST00000397378 SRRTQ9BXP5 876 aaKnown RBP9.63□□□□□ -0.87
NEDD9-203ENST00000397378 CASS4Q9NQ75 786 aa9.63□□□□□ -0.87
NEDD9-203ENST00000397378 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.63□□□□□ -0.87
NEDD9-203ENST00000397378 SLC12A6Q9UHW9 1150 aa9.63□□□□□ -0.87
NEDD9-203ENST00000397378 IPO11Q9UI26 975 aaKnown RBP9.63□□□□□ -0.87
NEDD9-203ENST00000397378 ZFR2Q9UPR6 939 aaKnown RBP9.63□□□□□ -0.87
NEDD9-203ENST00000397378 HPSEQ9Y251 543 aa9.63□□□□□ -0.87
NEDD9-203ENST00000397378 HS3ST2Q9Y278 367 aa9.63□□□□□ -0.87
NEDD9-203ENST00000397378 FARP1Q9Y4F1 1045 aaPredicted RBP9.63□□□□□ -0.87
NEDD9-203ENST00000397378 OR51B4Q9Y5P0 310 aa9.63□□□□□ -0.87
NEDD9-203ENST00000397378 OTOGQ6ZRI0 2925 aa9.62□□□□□ -0.87
NEDD9-203ENST00000397378 SPTY2D1-AS1A0A0U1RR47 76 aa9.62□□□□□ -0.87
NEDD9-203ENST00000397378 C9orf172C9J069 976 aa9.62□□□□□ -0.87
NEDD9-203ENST00000397378 K7ELQ4 463 aaPredicted RBP9.62□□□□□ -0.87
NEDD9-203ENST00000397378 RNF225M0QZC1 329 aaPredicted RBP9.62□□□□□ -0.87
NEDD9-203ENST00000397378 CNTN5O94779 1100 aa9.62□□□□□ -0.87
NEDD9-203ENST00000397378 CLDN1O95832 211 aa9.62□□□□□ -0.87
NEDD9-203ENST00000397378 DDAH2O95865 285 aa9.62□□□□□ -0.87
NEDD9-203ENST00000397378 TRUB2O95900 331 aaKnown RBP9.62□□□□□ -0.87
NEDD9-203ENST00000397378 F13A1P00488 732 aa9.62□□□□□ -0.87
NEDD9-203ENST00000397378 PRR29P0C7W0 189 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms