RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 OR1E1P30953 314 aa15.19■□□□□ 0.02
CAPN3-207ENST00000397200 MAGEA3P43357 314 aa15.19■□□□□ 0.02
CAPN3-207ENST00000397200 MAPKAPK2P49137 400 aa15.19■□□□□ 0.02
CAPN3-207ENST00000397200 TNK2Q07912 1038 aa15.19■□□□□ 0.02
CAPN3-207ENST00000397200 ZNF177Q13360 481 aaPredicted RBP15.19■□□□□ 0.02
CAPN3-207ENST00000397200 PAFAH1B3Q15102 231 aaKnown RBP15.19■□□□□ 0.02
CAPN3-207ENST00000397200 TPSAB1Q15661 275 aa15.19■□□□□ 0.02
CAPN3-207ENST00000397200 BZW1Q7L1Q6 419 aaKnown RBP15.19■□□□□ 0.02
CAPN3-207ENST00000397200 ANKMY2Q8IV38 441 aa15.19■□□□□ 0.02
CAPN3-207ENST00000397200 MFN1Q8IWA4 741 aa15.19■□□□□ 0.02
CAPN3-207ENST00000397200 CARNMT1Q8N4J0 409 aa15.19■□□□□ 0.02
CAPN3-207ENST00000397200 CPA6Q8N4T0 437 aa15.19■□□□□ 0.02
CAPN3-207ENST00000397200 LZTR1Q8N653 840 aa15.19■□□□□ 0.02
CAPN3-207ENST00000397200 FBXO36Q8NEA4 188 aa15.19■□□□□ 0.02
CAPN3-207ENST00000397200 BRD9Q9H8M2 597 aa15.19■□□□□ 0.02
CAPN3-207ENST00000397200 VPS37BQ9H9H4 285 aa15.19■□□□□ 0.02
CAPN3-207ENST00000397200 HPS4Q9NQG7 708 aa15.19■□□□□ 0.02
CAPN3-207ENST00000397200 RAB6BQ9NRW1 208 aa15.19■□□□□ 0.02
CAPN3-207ENST00000397200 PSMC3IPQ9P2W1 217 aaPredicted RBP15.19■□□□□ 0.02
CAPN3-207ENST00000397200 MFHAS1Q9Y4C4 1052 aa15.19■□□□□ 0.02
CAPN3-207ENST00000397200 LOC730098B7Z3J9 87 aa15.18■□□□□ 0.02
CAPN3-207ENST00000397200 PRPF4O43172 522 aaKnown RBP eCLIP15.18■□□□□ 0.02
CAPN3-207ENST00000397200 ZNF189O75820 626 aaPredicted RBP15.18■□□□□ 0.02
CAPN3-207ENST00000397200 TYRP14679 529 aa15.18■□□□□ 0.02
CAPN3-207ENST00000397200 BRAFP15056 766 aa15.18■□□□□ 0.02
CAPN3-207ENST00000397200 CDH18Q13634 790 aa15.18■□□□□ 0.02
CAPN3-207ENST00000397200 RUNX3Q13761 415 aa15.18■□□□□ 0.02
CAPN3-207ENST00000397200 PRKD1Q15139 912 aaPredicted RBP15.18■□□□□ 0.02
CAPN3-207ENST00000397200 TMED2Q15363 201 aa15.18■□□□□ 0.02
CAPN3-207ENST00000397200 QPCTQ16769 361 aa15.18■□□□□ 0.02
CAPN3-207ENST00000397200 KLHL38Q2WGJ6 581 aa15.18■□□□□ 0.02
CAPN3-207ENST00000397200 C6orf89Q6UWU4 347 aa15.18■□□□□ 0.02
CAPN3-207ENST00000397200 ADHFE1Q8IWW8 467 aa15.18■□□□□ 0.02
CAPN3-207ENST00000397200 FAM107BQ9H098 131 aa15.18■□□□□ 0.02
CAPN3-207ENST00000397200 ECT2Q9H8V3 914 aa15.18■□□□□ 0.02
CAPN3-207ENST00000397200 NDFIP2Q9NV92 336 aa15.18■□□□□ 0.02
CAPN3-207ENST00000397200 ZNF212Q9UDV6 495 aa15.18■□□□□ 0.02
CAPN3-207ENST00000397200 PRKAG3Q9UGI9 489 aa15.18■□□□□ 0.02
CAPN3-207ENST00000397200 MFSD11O43934 449 aa15.17■□□□□ 0.02
CAPN3-207ENST00000397200 RHOCP08134 193 aa15.17■□□□□ 0.02
CAPN3-207ENST00000397200 VAV1P15498 845 aa15.17■□□□□ 0.02
CAPN3-207ENST00000397200 SSTR1P30872 391 aa15.17■□□□□ 0.02
CAPN3-207ENST00000397200 GEMIN4P57678 1058 aaKnown RBP15.17■□□□□ 0.02
CAPN3-207ENST00000397200 SEMA5AQ13591 1074 aa15.17■□□□□ 0.02
CAPN3-207ENST00000397200 MPP2Q14168 576 aa15.17■□□□□ 0.02
CAPN3-207ENST00000397200 HP1BP3Q5SSJ5 553 aaPredicted RBP15.17■□□□□ 0.02
CAPN3-207ENST00000397200 ADGRD1Q6QNK2 874 aa15.17■□□□□ 0.02
CAPN3-207ENST00000397200 YTHDF3Q7Z739 585 aaKnown RBP15.17■□□□□ 0.02
CAPN3-207ENST00000397200 SETD3Q86TU7 594 aaPredicted RBP15.17■□□□□ 0.02
CAPN3-207ENST00000397200 UMODL1-AS1Q8N2C9 162 aa15.17■□□□□ 0.02
CAPN3-207ENST00000397200 AGGF1Q8N302 714 aaeCLIP15.17■□□□□ 0.02
CAPN3-207ENST00000397200 SLC44A3Q8N4M1 653 aa15.17■□□□□ 0.02
CAPN3-207ENST00000397200 NPWQ8N729 165 aa15.17■□□□□ 0.02
CAPN3-207ENST00000397200 LRRC39Q96DD0 335 aa15.17■□□□□ 0.02
CAPN3-207ENST00000397200 P2RY11Q96G91 374 aa15.17■□□□□ 0.02
CAPN3-207ENST00000397200 SSU72Q9NP77 194 aaKnown RBP15.17■□□□□ 0.02
CAPN3-207ENST00000397200 NUP205Q92621 2012 aa15.17■□□□□ 0.02
CAPN3-207ENST00000397200 TICRRQ7Z2Z1 1910 aa15.17■□□□□ 0.02
CAPN3-207ENST00000397200 RASA4BC9J798 803 aa15.17■□□□□ 0.02
CAPN3-207ENST00000397200 HOXC11O43248 304 aaPredicted RBP15.17■□□□□ 0.02
CAPN3-207ENST00000397200 RASA4O43374 803 aa15.17■□□□□ 0.02
CAPN3-207ENST00000397200 RAMP2O60895 175 aa15.17■□□□□ 0.02
CAPN3-207ENST00000397200 MAP3K6O95382 1288 aa15.17■□□□□ 0.02
CAPN3-207ENST00000397200 ASGR2P07307 311 aa15.17■□□□□ 0.02
CAPN3-207ENST00000397200 ELK3P41970 407 aa15.17■□□□□ 0.02
CAPN3-207ENST00000397200 NDST2P52849 883 aa15.17■□□□□ 0.02
CAPN3-207ENST00000397200 CORO7P57737 925 aa15.17■□□□□ 0.02
CAPN3-207ENST00000397200 ITPRIPL2Q3MIP1 535 aa15.17■□□□□ 0.02
CAPN3-207ENST00000397200 BBS9Q3SYG4 887 aa15.17■□□□□ 0.02
CAPN3-207ENST00000397200 RNF43Q68DV7 783 aa15.17■□□□□ 0.02
CAPN3-207ENST00000397200 MICALCLQ6ZW33 695 aa15.17■□□□□ 0.02
CAPN3-207ENST00000397200 ZNF534Q76KX8 674 aa15.17■□□□□ 0.02
CAPN3-207ENST00000397200 CAND1Q86VP6 1230 aaKnown RBP15.17■□□□□ 0.02
CAPN3-207ENST00000397200 IGDCC3Q8IVU1 814 aa15.17■□□□□ 0.02
CAPN3-207ENST00000397200 SRRM1Q8IYB3 904 aaKnown RBP15.17■□□□□ 0.02
CAPN3-207ENST00000397200 ZNF557Q8N988 423 aaPredicted RBP15.17■□□□□ 0.02
CAPN3-207ENST00000397200 CCDC110Q8TBZ0 833 aa15.17■□□□□ 0.02
CAPN3-207ENST00000397200 CSGALNACT1Q8TDX6 532 aa15.17■□□□□ 0.02
CAPN3-207ENST00000397200 MZB1Q8WU39 189 aa15.17■□□□□ 0.02
CAPN3-207ENST00000397200 CELF6Q96J87 481 aaKnown RBP15.17■□□□□ 0.02
CAPN3-207ENST00000397200 GTSE1Q9NYZ3 720 aa15.17■□□□□ 0.02
CAPN3-207ENST00000397200 TBK1Q9UHD2 729 aa15.17■□□□□ 0.02
CAPN3-207ENST00000397200 TBC1D30Q9Y2I9 924 aa15.17■□□□□ 0.02
CAPN3-207ENST00000397200 RAD54BQ9Y620 910 aa15.17■□□□□ 0.02
CAPN3-207ENST00000397200 MYO10Q9HD67 2058 aa15.16■□□□□ 0.02
CAPN3-207ENST00000397200 A0A0A0MRY4 1105 aa15.16■□□□□ 0.02
CAPN3-207ENST00000397200 ILVBLA1L0T0 632 aa15.16■□□□□ 0.02
CAPN3-207ENST00000397200 OTOL1A6NHN0 477 aaPredicted RBP15.16■□□□□ 0.02
CAPN3-207ENST00000397200 FOXO6A8MYZ6 492 aa15.16■□□□□ 0.02
CAPN3-207ENST00000397200 POC1B-GALNT4F8VUJ3 575 aa15.16■□□□□ 0.02
CAPN3-207ENST00000397200 ARNTLO00327 626 aa15.16■□□□□ 0.02
CAPN3-207ENST00000397200 C1QAP02745 245 aa15.16■□□□□ 0.02
CAPN3-207ENST00000397200 OXCT1P55809 520 aa15.16■□□□□ 0.02
CAPN3-207ENST00000397200 ZP2Q05996 745 aa15.16■□□□□ 0.02
CAPN3-207ENST00000397200 HEATR6Q6AI08 1181 aaKnown RBP15.16■□□□□ 0.02
CAPN3-207ENST00000397200 CXorf57Q6NSI4 855 aaKnown RBP15.16■□□□□ 0.02
CAPN3-207ENST00000397200 TAB3Q8N5C8 712 aaPredicted RBP15.16■□□□□ 0.02
CAPN3-207ENST00000397200 NAT16Q8N8M0 369 aa15.16■□□□□ 0.02
CAPN3-207ENST00000397200 FIBINQ8TAL6 211 aa15.16■□□□□ 0.02
CAPN3-207ENST00000397200 TTC8Q8TAM2 541 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms