RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 SARDHQ9UL12 918 aa14.21□□□□□ -0.13
SEC13-204ENST00000397099 AP4E1Q9UPM8 1137 aa14.21□□□□□ -0.13
SEC13-204ENST00000397099 PCDHB9Q9Y5E1 797 aa14.21□□□□□ -0.13
SEC13-204ENST00000397099 KNL1Q8NG31 2342 aa14.2□□□□□ -0.14
SEC13-204ENST00000397099 A0A1B0GVT2 93 aa14.2□□□□□ -0.14
SEC13-204ENST00000397099 K7ERQ8 282 aa14.2□□□□□ -0.14
SEC13-204ENST00000397099 FLRT2O43155 660 aa14.2□□□□□ -0.14
SEC13-204ENST00000397099 SH3BP5O60239 455 aa14.2□□□□□ -0.14
SEC13-204ENST00000397099 POP4O95707 220 aaKnown RBP14.2□□□□□ -0.14
SEC13-204ENST00000397099 SKILP12757 684 aa14.2□□□□□ -0.14
SEC13-204ENST00000397099 CD59P13987 128 aa14.2□□□□□ -0.14
SEC13-204ENST00000397099 GLDCP23378 1020 aa14.2□□□□□ -0.14
SEC13-204ENST00000397099 ITGB7P26010 798 aa14.2□□□□□ -0.14
SEC13-204ENST00000397099 HNRNPH3P31942 346 aaKnown RBP14.2□□□□□ -0.14
SEC13-204ENST00000397099 NUMBP49757 651 aa14.2□□□□□ -0.14
SEC13-204ENST00000397099 CNTN1Q12860 1018 aa14.2□□□□□ -0.14
SEC13-204ENST00000397099 GRM3Q14832 879 aa14.2□□□□□ -0.14
SEC13-204ENST00000397099 ARSIQ5FYB1 569 aa14.2□□□□□ -0.14
SEC13-204ENST00000397099 SPECC1LQ69YQ0 1117 aa14.2□□□□□ -0.14
SEC13-204ENST00000397099 NAPEPLDQ6IQ20 393 aa14.2□□□□□ -0.14
SEC13-204ENST00000397099 DPY19L3Q6ZPD9 716 aa14.2□□□□□ -0.14
SEC13-204ENST00000397099 ZNF354CQ86Y25 554 aa14.2□□□□□ -0.14
SEC13-204ENST00000397099 LZTR1Q8N653 840 aa14.2□□□□□ -0.14
SEC13-204ENST00000397099 MFSD2AQ8NA29 543 aa14.2□□□□□ -0.14
SEC13-204ENST00000397099 ARHGEF26Q96DR7 871 aa14.2□□□□□ -0.14
SEC13-204ENST00000397099 SERAC1Q96JX3 654 aa14.2□□□□□ -0.14
SEC13-204ENST00000397099 CAMK1GQ96NX5 476 aa14.2□□□□□ -0.14
SEC13-204ENST00000397099 ORAI3Q9BRQ5 295 aa14.2□□□□□ -0.14
SEC13-204ENST00000397099 ERVMER34-1Q9H9K5 563 aa14.2□□□□□ -0.14
SEC13-204ENST00000397099 AASDHPPTQ9NRN7 309 aa14.2□□□□□ -0.14
SEC13-204ENST00000397099 TM7SF3Q9NS93 570 aa14.2□□□□□ -0.14
SEC13-204ENST00000397099 ZNHIT6Q9NWK9 470 aaKnown RBP14.2□□□□□ -0.14
SEC13-204ENST00000397099 PLXNA2O75051 1894 aa14.2□□□□□ -0.14
SEC13-204ENST00000397099 TPRP12270 2363 aaKnown RBP14.19□□□□□ -0.14
SEC13-204ENST00000397099 CABIN1Q9Y6J0 2220 aa14.19□□□□□ -0.14
SEC13-204ENST00000397099 ARHGAP42A6NI28 874 aa14.19□□□□□ -0.14
SEC13-204ENST00000397099 PRAMEF26H0Y7S4 382 aa14.19□□□□□ -0.14
SEC13-204ENST00000397099 EEF2KO00418 725 aaKnown RBP14.19□□□□□ -0.14
SEC13-204ENST00000397099 DAPK3O43293 454 aa14.19□□□□□ -0.14
SEC13-204ENST00000397099 BUB1O43683 1085 aa14.19□□□□□ -0.14
SEC13-204ENST00000397099 AP1G1O43747 822 aa14.19□□□□□ -0.14
SEC13-204ENST00000397099 HYAL3O43820 417 aaPredicted RBP14.19□□□□□ -0.14
SEC13-204ENST00000397099 PCDHGA12O60330 932 aa14.19□□□□□ -0.14
SEC13-204ENST00000397099 ZNF821O75541 412 aaPredicted RBP14.19□□□□□ -0.14
SEC13-204ENST00000397099 LEFTY1O75610 366 aa14.19□□□□□ -0.14
SEC13-204ENST00000397099 GYPCP04921 128 aa14.19□□□□□ -0.14
SEC13-204ENST00000397099 CTSLP07711 333 aa14.19□□□□□ -0.14
SEC13-204ENST00000397099 ACVRL1P37023 503 aa14.19□□□□□ -0.14
SEC13-204ENST00000397099 CTSKP43235 329 aa14.19□□□□□ -0.14
SEC13-204ENST00000397099 CCT8P50990 548 aa14.19□□□□□ -0.14
SEC13-204ENST00000397099 DNA2P51530 1060 aa14.19□□□□□ -0.14
SEC13-204ENST00000397099 CCNHP51946 323 aaPredicted RBP14.19□□□□□ -0.14
SEC13-204ENST00000397099 NEK3P51956 506 aa14.19□□□□□ -0.14
SEC13-204ENST00000397099 OGDHQ02218 1023 aa14.19□□□□□ -0.14
SEC13-204ENST00000397099 SERINC3Q13530 473 aa14.19□□□□□ -0.14
SEC13-204ENST00000397099 ZNF423Q2M1K9 1284 aa14.19□□□□□ -0.14
SEC13-204ENST00000397099 KIF19Q2TAC6 998 aa14.19□□□□□ -0.14
SEC13-204ENST00000397099 PIP5KL1Q5T9C9 394 aa14.19□□□□□ -0.14
SEC13-204ENST00000397099 TMCO4Q5TGY1 634 aa14.19□□□□□ -0.14
SEC13-204ENST00000397099 UNQ6494/PRO21346Q6UXR6 183 aa14.19□□□□□ -0.14
SEC13-204ENST00000397099 DBX2Q6ZNG2 339 aa14.19□□□□□ -0.14
SEC13-204ENST00000397099 NAXDQ8IW45 347 aa14.19□□□□□ -0.14
SEC13-204ENST00000397099 NIPA2Q8N8Q9 360 aa14.19□□□□□ -0.14
SEC13-204ENST00000397099 OR2AP1Q8NGE2 309 aa14.19□□□□□ -0.14
SEC13-204ENST00000397099 CPLX3Q8WVH0 158 aa14.19□□□□□ -0.14
SEC13-204ENST00000397099 CDC6Q99741 560 aa14.19□□□□□ -0.14
SEC13-204ENST00000397099 SCNM1Q9BWG6 230 aa14.19□□□□□ -0.14
SEC13-204ENST00000397099 XPO4Q9C0E2 1151 aaKnown RBP14.19□□□□□ -0.14
SEC13-204ENST00000397099 DHX35Q9H5Z1 703 aaKnown RBP14.19□□□□□ -0.14
SEC13-204ENST00000397099 ZWILCHQ9H900 591 aa14.19□□□□□ -0.14
SEC13-204ENST00000397099 GDF3Q9NR23 364 aa14.19□□□□□ -0.14
SEC13-204ENST00000397099 NDFIP2Q9NV92 336 aa14.19□□□□□ -0.14
SEC13-204ENST00000397099 HECAQ9UBI9 543 aaPredicted RBP14.19□□□□□ -0.14
SEC13-204ENST00000397099 IP6K2Q9UHH9 426 aa14.19□□□□□ -0.14
SEC13-204ENST00000397099 TP53BP1Q12888 1972 aaPredicted RBP14.19□□□□□ -0.14
SEC13-204ENST00000397099 EPG5Q9HCE0 2579 aa14.18□□□□□ -0.14
SEC13-204ENST00000397099 C1QTNF9BB2RNN3 333 aa14.18□□□□□ -0.14
SEC13-204ENST00000397099 RASA4BC9J798 803 aa14.18□□□□□ -0.14
SEC13-204ENST00000397099 RASA4O43374 803 aa14.18□□□□□ -0.14
SEC13-204ENST00000397099 LRCH4O75427 683 aa14.18□□□□□ -0.14
SEC13-204ENST00000397099 CD160O95971 181 aa14.18□□□□□ -0.14
SEC13-204ENST00000397099 IGSF6O95976 241 aa14.18□□□□□ -0.14
SEC13-204ENST00000397099 PROS1P07225 676 aa14.18□□□□□ -0.14
SEC13-204ENST00000397099 C1QTNF9P0C862 333 aa14.18□□□□□ -0.14
SEC13-204ENST00000397099 MIPP30301 263 aa14.18□□□□□ -0.14
SEC13-204ENST00000397099 ARRB1P49407 418 aaPredicted RBP14.18□□□□□ -0.14
SEC13-204ENST00000397099 SUOXP51687 545 aa14.18□□□□□ -0.14
SEC13-204ENST00000397099 RPS21P63220 83 aaKnown RBP14.18□□□□□ -0.14
SEC13-204ENST00000397099 BNC1Q01954 994 aa14.18□□□□□ -0.14
SEC13-204ENST00000397099 STAT4Q14765 748 aa14.18□□□□□ -0.14
SEC13-204ENST00000397099 NFKBIBQ15653 356 aa14.18□□□□□ -0.14
SEC13-204ENST00000397099 KIAA1161Q6NSJ0 714 aa14.18□□□□□ -0.14
SEC13-204ENST00000397099 ALKBH5Q6P6C2 394 aaKnown RBP14.18□□□□□ -0.14
SEC13-204ENST00000397099 FBXL19Q6PCT2 694 aa14.18□□□□□ -0.14
SEC13-204ENST00000397099 GLRX5Q86SX6 157 aa14.18□□□□□ -0.14
SEC13-204ENST00000397099 HORMAD1Q86X24 394 aa14.18□□□□□ -0.14
SEC13-204ENST00000397099 DCP2Q8IU60 420 aaKnown RBP14.18□□□□□ -0.14
SEC13-204ENST00000397099 PYROXD2Q8N2H3 581 aa14.18□□□□□ -0.14
SEC13-204ENST00000397099 OR8K1Q8NGG5 319 aa14.18□□□□□ -0.14
SEC13-204ENST00000397099 HCAR2Q8TDS4 363 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms