RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 NEPROQ6NW34 567 aa11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 TREML1Q86YW5 311 aa11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 DENND6AQ8IWF6 608 aa11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 TSPAN17Q96FV3 270 aa11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 KLHL5Q96PQ7 755 aa11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 FCRL5Q96RD9 977 aa11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 SERPINI1Q99574 410 aa11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 OSBPL1AQ9BXW6 950 aa11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 CDH19Q9H159 772 aa11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 STARD7Q9NQZ5 370 aa11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 BATF3Q9NR55 127 aa11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 TLR8Q9NR97 1041 aaKnown RBP11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 ARHGAP26Q9UNA1 814 aa11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 SLC27A5Q9Y2P5 690 aa11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 CRABP2P29373 138 aa11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 CDC25CP30307 473 aa11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 HTR7P34969 479 aa11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 IDH3AP50213 366 aa11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 WNT3AP56704 352 aa11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 RAB10P61026 200 aa11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 PSMD5Q16401 504 aa11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 SPOUT1Q5T280 376 aaKnown RBP11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 MAP3K21Q5TCX8 1036 aa11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 KIAA1841Q6NSI8 718 aa11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 TMC7Q7Z402 723 aa11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 ULK2Q8IYT8 1036 aa11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 ZNF781Q8N8C0 355 aa11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 RTL3Q8N8U3 475 aaKnown RBP11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 ATAD1Q8NBU5 361 aa11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 C20orf27Q9GZN8 174 aa11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 SMOC2Q9H3U7 446 aa11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 DNAJC28Q9NX36 388 aa11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 GMIPQ9P107 970 aa11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 ZCWPW2A0A1B0GU75 182 aa11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 CRCPO75575 148 aa11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 CABYRO75952 493 aa11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 ALDH1A1P00352 501 aa11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 CYP11A1P05108 521 aa11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 CA8P35219 290 aa11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 ARL1P40616 181 aaPredicted RBP11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 PRKAA1Q13131 559 aa11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 SEMA3BQ13214 749 aa11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 CTC1Q2NKJ3 1217 aa11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 LRRC49Q8IUZ0 686 aa11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 BLOC1S5Q8TDH9 187 aa11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 ANKRD27Q96NW4 1050 aa11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 OMDQ99983 421 aa11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 NUF2Q9BZD4 464 aa11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 CYP4F12Q9HCS2 524 aa11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 MARCH2Q9P0N8 246 aa11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 EMCNQ9ULC0 261 aa11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 FNDC3AQ9Y2H6 1198 aaKnown RBP11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 TK2O00142 265 aa11.71□□□□□ -0.53
PDXDC1-202ENST00000396410 RAMP2O60895 175 aa11.71□□□□□ -0.53
PDXDC1-202ENST00000396410 HLA-DQB2P05538 268 aa11.71□□□□□ -0.53
PDXDC1-202ENST00000396410 MYL4P12829 197 aa11.71□□□□□ -0.53
PDXDC1-202ENST00000396410 SERPINH1P50454 418 aaKnown RBP11.71□□□□□ -0.53
PDXDC1-202ENST00000396410 RPL14P50914 215 aaKnown RBP11.71□□□□□ -0.53
PDXDC1-202ENST00000396410 LIPMQ5VYY2 423 aa11.71□□□□□ -0.53
PDXDC1-202ENST00000396410 DEFB107AQ8IZN7 70 aa11.71□□□□□ -0.53
PDXDC1-202ENST00000396410 RTP3Q9BQQ7 232 aa11.71□□□□□ -0.53
PDXDC1-202ENST00000396410 VCX3BQ9H321 246 aa11.71□□□□□ -0.53
PDXDC1-202ENST00000396410 XPR1Q9UBH6 696 aa11.71□□□□□ -0.53
PDXDC1-202ENST00000396410 PCDHB12Q9Y5F1 795 aa11.71□□□□□ -0.53
PDXDC1-202ENST00000396410 HS3ST4Q9Y661 456 aa11.71□□□□□ -0.53
PDXDC1-202ENST00000396410 M0QZQ0 153 aa11.71□□□□□ -0.53
PDXDC1-202ENST00000396410 ALDH2P05091 517 aa11.71□□□□□ -0.53
PDXDC1-202ENST00000396410 OR1E1P30953 314 aa11.71□□□□□ -0.53
PDXDC1-202ENST00000396410 CDK18Q07002 472 aa11.71□□□□□ -0.53
PDXDC1-202ENST00000396410 POLD3Q15054 466 aaPredicted RBP11.71□□□□□ -0.53
PDXDC1-202ENST00000396410 ACSBG2Q5FVE4 666 aa11.71□□□□□ -0.53
PDXDC1-202ENST00000396410 IL31Q6EBC2 164 aa11.71□□□□□ -0.53
PDXDC1-202ENST00000396410 RIPOR1Q6ZS17 1223 aa11.71□□□□□ -0.53
PDXDC1-202ENST00000396410 NET1Q7Z628 596 aaPredicted RBP11.71□□□□□ -0.53
PDXDC1-202ENST00000396410 ZNF280BQ86YH2 543 aa11.71□□□□□ -0.53
PDXDC1-202ENST00000396410 ZNF778Q96MU6 729 aa11.71□□□□□ -0.53
PDXDC1-202ENST00000396410 GPAMQ9HCL2 828 aa11.71□□□□□ -0.53
PDXDC1-202ENST00000396410 BCAP29Q9UHQ4 241 aa11.71□□□□□ -0.53
PDXDC1-202ENST00000396410 TCAF1Q9Y4C2 921 aa11.71□□□□□ -0.53
PDXDC1-202ENST00000396410 ZSWIM8A7E2V4 1837 aa11.71□□□□□ -0.54
PDXDC1-202ENST00000396410 KCNU1A8MYU2 1149 aa11.71□□□□□ -0.54
PDXDC1-202ENST00000396410 ZMPSTE24O75844 475 aa11.71□□□□□ -0.54
PDXDC1-202ENST00000396410 SLC10A3P09131 477 aa11.71□□□□□ -0.54
PDXDC1-202ENST00000396410 GPR15P49685 360 aa11.71□□□□□ -0.54
PDXDC1-202ENST00000396410 NUDT2P50583 147 aa11.71□□□□□ -0.54
PDXDC1-202ENST00000396410 ZNF460Q14592 562 aa11.71□□□□□ -0.54
PDXDC1-202ENST00000396410 AGAP9Q5VTM2 703 aa11.71□□□□□ -0.54
PDXDC1-202ENST00000396410 LRRC74BQ6ZQY2 392 aa11.71□□□□□ -0.54
PDXDC1-202ENST00000396410 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.71□□□□□ -0.54
PDXDC1-202ENST00000396410 NDNQ99608 321 aa11.71□□□□□ -0.54
PDXDC1-202ENST00000396410 NCKIPSDQ9NZQ3 722 aa11.71□□□□□ -0.54
PDXDC1-202ENST00000396410 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.71□□□□□ -0.54
PDXDC1-202ENST00000396410 MAGEC1O60732 1142 aa11.7□□□□□ -0.54
PDXDC1-202ENST00000396410 CHRNA4P43681 627 aa11.7□□□□□ -0.54
PDXDC1-202ENST00000396410 ZNF33AQ06730 810 aa11.7□□□□□ -0.54
PDXDC1-202ENST00000396410 MAP7D1Q3KQU3 841 aa11.7□□□□□ -0.54
PDXDC1-202ENST00000396410 CNTD1Q8N815 330 aa11.7□□□□□ -0.54
PDXDC1-202ENST00000396410 RDH11Q8TC12 318 aa11.7□□□□□ -0.54
PDXDC1-202ENST00000396410 GATA5Q9BWX5 397 aaPredicted RBP11.7□□□□□ -0.54
PDXDC1-202ENST00000396410 FBXO5Q9UKT4 447 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms