RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 NTAN1Q96AB6 310 aa18.66■□□□□ 0.58
FXN-203ENST00000396366 TBC1D31Q96DN5 1066 aa18.66■□□□□ 0.58
FXN-203ENST00000396366 NAP1L5Q96NT1 182 aaPredicted RBP18.66■□□□□ 0.58
FXN-203ENST00000396366 BPIFA3Q9BQP9 254 aa18.66■□□□□ 0.58
FXN-203ENST00000396366 HDAC8Q9BY41 377 aa18.66■□□□□ 0.58
FXN-203ENST00000396366 TM6SF2Q9BZW4 377 aa18.66■□□□□ 0.58
FXN-203ENST00000396366 CEP44Q9C0F1 390 aa18.66■□□□□ 0.58
FXN-203ENST00000396366 NOL6Q9H6R4 1146 aaKnown RBP18.66■□□□□ 0.58
FXN-203ENST00000396366 FZD3Q9NPG1 666 aa18.66■□□□□ 0.58
FXN-203ENST00000396366 DYRK4Q9NR20 520 aa18.66■□□□□ 0.58
FXN-203ENST00000396366 TPX2Q9ULW0 747 aaKnown RBP18.66■□□□□ 0.58
FXN-203ENST00000396366 DMTF1Q9Y222 760 aa18.66■□□□□ 0.58
FXN-203ENST00000396366 LRRC53A6NM62 1247 aa18.65■□□□□ 0.58
FXN-203ENST00000396366 TNFSF14O43557 240 aa18.65■□□□□ 0.58
FXN-203ENST00000396366 ITGAVP06756 1048 aa18.65■□□□□ 0.58
FXN-203ENST00000396366 TNFAIP3P21580 790 aa18.65■□□□□ 0.58
FXN-203ENST00000396366 MAPKAPK2P49137 400 aa18.65■□□□□ 0.58
FXN-203ENST00000396366 ZNF284Q2VY69 593 aa18.65■□□□□ 0.58
FXN-203ENST00000396366 SETMARQ53H47 684 aaPredicted RBP18.65■□□□□ 0.58
FXN-203ENST00000396366 SEL1L3Q68CR1 1132 aa18.65■□□□□ 0.58
FXN-203ENST00000396366 CCNI2Q6ZMN8 369 aaPredicted RBP18.65■□□□□ 0.58
FXN-203ENST00000396366 EID2Q8N6I1 236 aa18.65■□□□□ 0.58
FXN-203ENST00000396366 PCDH20Q8N6Y1 951 aaKnown RBP18.65■□□□□ 0.58
FXN-203ENST00000396366 ZCCHC14Q8WYQ9 949 aaKnown RBP18.65■□□□□ 0.58
FXN-203ENST00000396366 VOPP1Q96AW1 172 aa18.65■□□□□ 0.58
FXN-203ENST00000396366 HEPHQ9BQS7 1158 aa18.65■□□□□ 0.58
FXN-203ENST00000396366 KLC2Q9H0B6 622 aa18.65■□□□□ 0.58
FXN-203ENST00000396366 ZFR2Q9UPR6 939 aaKnown RBP18.65■□□□□ 0.58
FXN-203ENST00000396366 FREM2Q5SZK8 3169 aa18.65■□□□□ 0.58
FXN-203ENST00000396366 PRAMEF26H0Y7S4 382 aa18.64■□□□□ 0.57
FXN-203ENST00000396366 PCDH8O95206 1070 aa18.64■□□□□ 0.57
FXN-203ENST00000396366 CAPNS1P04632 268 aa18.64■□□□□ 0.57
FXN-203ENST00000396366 EPHA8P29322 1005 aaPredicted RBP18.64■□□□□ 0.57
FXN-203ENST00000396366 SCAPQ12770 1279 aa18.64■□□□□ 0.57
FXN-203ENST00000396366 POLD3Q15054 466 aaPredicted RBP18.64■□□□□ 0.57
FXN-203ENST00000396366 E4F1Q66K89 784 aaPredicted RBP18.64■□□□□ 0.57
FXN-203ENST00000396366 HORMAD1Q86X24 394 aa18.64■□□□□ 0.57
FXN-203ENST00000396366 RYBPQ8N488 228 aaPredicted RBP18.64■□□□□ 0.57
FXN-203ENST00000396366 MAGEH1Q9H213 219 aa18.64■□□□□ 0.57
FXN-203ENST00000396366 ZDHHC6Q9H6R6 413 aa18.64■□□□□ 0.57
FXN-203ENST00000396366 FTSJ1Q9UET6 329 aa18.64■□□□□ 0.57
FXN-203ENST00000396366 RALYQ9UKM9 306 aaKnown RBP18.64■□□□□ 0.57
FXN-203ENST00000396366 FZD10Q9ULW2 581 aa18.64■□□□□ 0.57
FXN-203ENST00000396366 SMTNL1A8MU46 457 aa18.63■□□□□ 0.57
FXN-203ENST00000396366 TAF4O00268 1085 aa18.63■□□□□ 0.57
FXN-203ENST00000396366 ATMINO43313 823 aaPredicted RBP18.63■□□□□ 0.57
FXN-203ENST00000396366 KDELR3O43731 214 aa18.63■□□□□ 0.57
FXN-203ENST00000396366 CREB3O43889 395 aa18.63■□□□□ 0.57
FXN-203ENST00000396366 RAMP2O60895 175 aa18.63■□□□□ 0.57
FXN-203ENST00000396366 EPHB2P29323 1055 aa18.63■□□□□ 0.57
FXN-203ENST00000396366 L1CAMP32004 1257 aa18.63■□□□□ 0.57
FXN-203ENST00000396366 NUDT1P36639 197 aa18.63■□□□□ 0.57
FXN-203ENST00000396366 ARRB1P49407 418 aaPredicted RBP18.63■□□□□ 0.57
FXN-203ENST00000396366 ZNF165P49910 485 aa18.63■□□□□ 0.57
FXN-203ENST00000396366 CLDN2P57739 230 aa18.63■□□□□ 0.57
FXN-203ENST00000396366 DNAJC3Q13217 504 aa18.63■□□□□ 0.57
FXN-203ENST00000396366 ATXN7L2Q5T6C5 722 aaPredicted RBP18.63■□□□□ 0.57
FXN-203ENST00000396366 NEK5Q6P3R8 708 aa18.63■□□□□ 0.57
FXN-203ENST00000396366 DCUN1D2Q6PH85 259 aa18.63■□□□□ 0.57
FXN-203ENST00000396366 TMEM145Q8NBT3 493 aa18.63■□□□□ 0.57
FXN-203ENST00000396366 KLHDC7BQ96G42 594 aa18.63■□□□□ 0.57
FXN-203ENST00000396366 CNPY3Q9BT09 278 aa18.63■□□□□ 0.57
FXN-203ENST00000396366 FUCA2Q9BTY2 467 aa18.63■□□□□ 0.57
FXN-203ENST00000396366 HAUS4Q9H6D7 363 aa18.63■□□□□ 0.57
FXN-203ENST00000396366 ERVMER34-1Q9H9K5 563 aa18.63■□□□□ 0.57
FXN-203ENST00000396366 GPATCH2LQ9NWQ4 482 aa18.63■□□□□ 0.57
FXN-203ENST00000396366 DSPP15924 2871 aaKnown RBP18.62■□□□□ 0.57
FXN-203ENST00000396366 FAM149AA5PLN7 773 aa18.62■□□□□ 0.57
FXN-203ENST00000396366 ANKRD62A6NC57 917 aa18.62■□□□□ 0.57
FXN-203ENST00000396366 TMEM8BA6NDV4 472 aa18.62■□□□□ 0.57
FXN-203ENST00000396366 SRRM3A6NNA2 597 aaPredicted RBP18.62■□□□□ 0.57
FXN-203ENST00000396366 SDC3O75056 442 aa18.62■□□□□ 0.57
FXN-203ENST00000396366 LDOC1O95751 146 aaPredicted RBP18.62■□□□□ 0.57
FXN-203ENST00000396366 CCDC172P0C7W6 258 aa18.62■□□□□ 0.57
FXN-203ENST00000396366 ADRB3P13945 408 aa18.62■□□□□ 0.57
FXN-203ENST00000396366 ITGB7P26010 798 aa18.62■□□□□ 0.57
FXN-203ENST00000396366 ETFBP38117 255 aa18.62■□□□□ 0.57
FXN-203ENST00000396366 RXRGP48443 463 aa18.62■□□□□ 0.57
FXN-203ENST00000396366 NEK3P51956 506 aa18.62■□□□□ 0.57
FXN-203ENST00000396366 MAMLD1Q13495 774 aa18.62■□□□□ 0.57
FXN-203ENST00000396366 FGL2Q14314 439 aa18.62■□□□□ 0.57
FXN-203ENST00000396366 IQCB1Q15051 598 aa18.62■□□□□ 0.57
FXN-203ENST00000396366 ASIC2Q16515 512 aa18.62■□□□□ 0.57
FXN-203ENST00000396366 TMEM259Q4ZIN3 620 aa18.62■□□□□ 0.57
FXN-203ENST00000396366 EFHC2Q5JST6 749 aa18.62■□□□□ 0.57
FXN-203ENST00000396366 FBXL19Q6PCT2 694 aa18.62■□□□□ 0.57
FXN-203ENST00000396366 PARS2Q7L3T8 475 aaKnown RBP18.62■□□□□ 0.57
FXN-203ENST00000396366 TMPRSS7Q7RTY8 843 aa18.62■□□□□ 0.57
FXN-203ENST00000396366 KANSL1Q7Z3B3 1105 aa18.62■□□□□ 0.57
FXN-203ENST00000396366 ZNF571Q7Z3V5 609 aaPredicted RBP18.62■□□□□ 0.57
FXN-203ENST00000396366 IQCHQ86VS3 1027 aa18.62■□□□□ 0.57
FXN-203ENST00000396366 ZNF354CQ86Y25 554 aa18.62■□□□□ 0.57
FXN-203ENST00000396366 RTL3Q8N8U3 475 aaKnown RBP18.62■□□□□ 0.57
FXN-203ENST00000396366 ISG20Q96AZ6 181 aaKnown RBP18.62■□□□□ 0.57
FXN-203ENST00000396366 PPP1R16AQ96I34 528 aa18.62■□□□□ 0.57
FXN-203ENST00000396366 CNDP2Q96KP4 475 aaKnown RBP18.62■□□□□ 0.57
FXN-203ENST00000396366 RETREG1Q9H6L5 497 aa18.62■□□□□ 0.57
FXN-203ENST00000396366 HPCAL4Q9UM19 191 aa18.62■□□□□ 0.57
FXN-203ENST00000396366 MYO6Q9UM54 1294 aa18.62■□□□□ 0.57
FXN-203ENST00000396366 FADS3Q9Y5Q0 445 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms