RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 DEPDC1BQ8WUY9 529 aa8.54□□□□□ -1.04
NDE1-202ENST00000396355 PAWRQ96IZ0 340 aaKnown RBP8.54□□□□□ -1.04
NDE1-202ENST00000396355 SEPHS2Q99611 448 aa8.54□□□□□ -1.04
NDE1-202ENST00000396355 AIFM2Q9BRQ8 373 aa8.54□□□□□ -1.04
NDE1-202ENST00000396355 WNT8AQ9H1J5 351 aa8.54□□□□□ -1.04
NDE1-202ENST00000396355 NTN4Q9HB63 628 aa8.54□□□□□ -1.04
NDE1-202ENST00000396355 ACSS2Q9NR19 701 aa8.54□□□□□ -1.04
NDE1-202ENST00000396355 TAS2R14Q9NYV8 317 aa8.54□□□□□ -1.04
NDE1-202ENST00000396355 NXF1Q9UBU9 619 aaKnown RBP8.54□□□□□ -1.04
NDE1-202ENST00000396355 CDH22Q9UJ99 828 aa8.54□□□□□ -1.04
NDE1-202ENST00000396355 POLR2AP24928 1970 aaKnown RBP8.54□□□□□ -1.04
NDE1-202ENST00000396355 TIPRLO75663 272 aa8.54□□□□□ -1.04
NDE1-202ENST00000396355 PSMD10O75832 226 aa8.54□□□□□ -1.04
NDE1-202ENST00000396355 FCER2P06734 321 aa8.54□□□□□ -1.04
NDE1-202ENST00000396355 RALAP11233 206 aa8.54□□□□□ -1.04
NDE1-202ENST00000396355 ALAS1P13196 640 aa8.54□□□□□ -1.04
NDE1-202ENST00000396355 C1QBPQ07021 282 aaKnown RBP8.54□□□□□ -1.04
NDE1-202ENST00000396355 DGUOKQ16854 277 aa8.54□□□□□ -1.04
NDE1-202ENST00000396355 KIF19Q2TAC6 998 aa8.54□□□□□ -1.04
NDE1-202ENST00000396355 NANOGP8Q6NSW7 305 aa8.54□□□□□ -1.04
NDE1-202ENST00000396355 C16orf89Q6UX73 402 aa8.54□□□□□ -1.04
NDE1-202ENST00000396355 PIWIL3Q7Z3Z3 882 aaKnown RBP8.54□□□□□ -1.04
NDE1-202ENST00000396355 TRABD2AQ86V40 505 aa8.54□□□□□ -1.04
NDE1-202ENST00000396355 ELMOD1Q8N336 334 aa8.54□□□□□ -1.04
NDE1-202ENST00000396355 GRPEL2Q8TAA5 225 aa8.54□□□□□ -1.04
NDE1-202ENST00000396355 FAM20AQ96MK3 541 aa8.54□□□□□ -1.04
NDE1-202ENST00000396355 QKIQ96PU8 341 aaKnown RBP eCLIP8.54□□□□□ -1.04
NDE1-202ENST00000396355 IER2Q9BTL4 223 aa8.54□□□□□ -1.04
NDE1-202ENST00000396355 TEX12Q9BXU0 123 aa8.54□□□□□ -1.04
NDE1-202ENST00000396355 COMMD8Q9NX08 183 aa8.54□□□□□ -1.04
NDE1-202ENST00000396355 GTSE1Q9NYZ3 720 aa8.54□□□□□ -1.04
NDE1-202ENST00000396355 HSPBP1Q9NZL4 362 aa8.54□□□□□ -1.04
NDE1-202ENST00000396355 BAG5Q9UL15 447 aa8.54□□□□□ -1.04
NDE1-202ENST00000396355 EDARQ9UNE0 448 aa8.54□□□□□ -1.04
NDE1-202ENST00000396355 OR6C70A6NIJ9 312 aa8.53□□□□□ -1.04
NDE1-202ENST00000396355 TISP43B9A030 160 aa8.53□□□□□ -1.04
NDE1-202ENST00000396355 MAGEC1O60732 1142 aa8.53□□□□□ -1.04
NDE1-202ENST00000396355 LYPLA1O75608 230 aaPredicted RBP8.53□□□□□ -1.04
NDE1-202ENST00000396355 PGRP06401 933 aa8.53□□□□□ -1.04
NDE1-202ENST00000396355 ABCB1P08183 1280 aaPredicted RBP8.53□□□□□ -1.04
NDE1-202ENST00000396355 BMP3P12645 472 aa8.53□□□□□ -1.04
NDE1-202ENST00000396355 GLULP15104 373 aa8.53□□□□□ -1.04
NDE1-202ENST00000396355 HK2P52789 917 aa8.53□□□□□ -1.04
NDE1-202ENST00000396355 GJA9P57773 515 aa8.53□□□□□ -1.04
NDE1-202ENST00000396355 PPATQ06203 517 aa8.53□□□□□ -1.04
NDE1-202ENST00000396355 SCRN3Q0VDG4 424 aa8.53□□□□□ -1.04
NDE1-202ENST00000396355 PPIL2Q13356 520 aa8.53□□□□□ -1.04
NDE1-202ENST00000396355 MOGQ16653 247 aa8.53□□□□□ -1.04
NDE1-202ENST00000396355 GARNL3Q5VVW2 1013 aa8.53□□□□□ -1.04
NDE1-202ENST00000396355 FBXL19Q6PCT2 694 aa8.53□□□□□ -1.04
NDE1-202ENST00000396355 CADM3Q8N126 398 aa8.53□□□□□ -1.04
NDE1-202ENST00000396355 EIF1ADQ8N9N8 165 aaKnown RBP8.53□□□□□ -1.04
NDE1-202ENST00000396355 ACER1Q8TDN7 264 aa8.53□□□□□ -1.04
NDE1-202ENST00000396355 SGF29Q96ES7 293 aa8.53□□□□□ -1.04
NDE1-202ENST00000396355 RSPH9Q9H1X1 276 aaPredicted RBP8.53□□□□□ -1.04
NDE1-202ENST00000396355 HIPK3Q9H422 1215 aa8.53□□□□□ -1.04
NDE1-202ENST00000396355 SLC27A5Q9Y2P5 690 aa8.53□□□□□ -1.04
NDE1-202ENST00000396355 ATRNL1Q5VV63 1379 aa8.53□□□□□ -1.04
NDE1-202ENST00000396355 KAT6AQ92794 2004 aa8.53□□□□□ -1.04
NDE1-202ENST00000396355 FRMPD4Q14CM0 1322 aa8.53□□□□□ -1.04
NDE1-202ENST00000396355 DNAJA2O60884 412 aa8.53□□□□□ -1.04
NDE1-202ENST00000396355 PLATP00750 562 aa8.53□□□□□ -1.04
NDE1-202ENST00000396355 MMP8P22894 467 aa8.53□□□□□ -1.04
NDE1-202ENST00000396355 RBL1P28749 1068 aa8.53□□□□□ -1.04
NDE1-202ENST00000396355 TBCELQ5QJ74 424 aa8.53□□□□□ -1.04
NDE1-202ENST00000396355 PPP1R26Q5T8A7 1209 aaPredicted RBP8.53□□□□□ -1.04
NDE1-202ENST00000396355 VWA5B1Q5TIE3 1220 aa8.53□□□□□ -1.04
NDE1-202ENST00000396355 LIN9Q5TKA1 542 aa8.53□□□□□ -1.04
NDE1-202ENST00000396355 FKBP9P1Q75LS8 142 aa8.53□□□□□ -1.04
NDE1-202ENST00000396355 IGFN1Q86VF2 1251 aa8.53□□□□□ -1.04
NDE1-202ENST00000396355 TRIM48Q8IWZ4 208 aa8.53□□□□□ -1.04
NDE1-202ENST00000396355 BBS7Q8IWZ6 715 aa8.53□□□□□ -1.04
NDE1-202ENST00000396355 SAMD14Q8IZD0 417 aaPredicted RBP8.53□□□□□ -1.04
NDE1-202ENST00000396355 AHI1Q8N157 1196 aa8.53□□□□□ -1.04
NDE1-202ENST00000396355 KYQ8NBH2 561 aa8.53□□□□□ -1.04
NDE1-202ENST00000396355 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.53□□□□□ -1.04
NDE1-202ENST00000396355 ADAM32Q8TC27 787 aa8.53□□□□□ -1.04
NDE1-202ENST00000396355 HMX1Q9NP08 348 aaPredicted RBP8.53□□□□□ -1.04
NDE1-202ENST00000396355 FAM105AQ9NUU6 356 aa8.53□□□□□ -1.04
NDE1-202ENST00000396355 DICER1Q9UPY3 1922 aaKnown RBP8.53□□□□□ -1.04
NDE1-202ENST00000396355 SAGE2PA6NJ88 616 aa8.53□□□□□ -1.04
NDE1-202ENST00000396355 CES2O00748 559 aa8.53□□□□□ -1.04
NDE1-202ENST00000396355 SLC16A3O15427 465 aaKnown RBP8.53□□□□□ -1.04
NDE1-202ENST00000396355 GNRH1P01148 92 aa8.53□□□□□ -1.04
NDE1-202ENST00000396355 CYP3A4P08684 503 aa8.53□□□□□ -1.04
NDE1-202ENST00000396355 EVI2BP34910 448 aa8.53□□□□□ -1.04
NDE1-202ENST00000396355 GNL1P36915 607 aaPredicted RBP8.53□□□□□ -1.04
NDE1-202ENST00000396355 NSFP46459 744 aaKnown RBP8.53□□□□□ -1.04
NDE1-202ENST00000396355 NDST2P52849 883 aa8.53□□□□□ -1.04
NDE1-202ENST00000396355 RAB15P59190 212 aa8.53□□□□□ -1.04
NDE1-202ENST00000396355 GPR68Q15743 365 aa8.53□□□□□ -1.04
NDE1-202ENST00000396355 TEDDM1Q5T9Z0 273 aa8.53□□□□□ -1.04
NDE1-202ENST00000396355 NLRX1Q86UT6 975 aa8.53□□□□□ -1.04
NDE1-202ENST00000396355 STK32CQ86UX6 486 aa8.53□□□□□ -1.04
NDE1-202ENST00000396355 FAM178BQ8IXR5 827 aa8.53□□□□□ -1.04
NDE1-202ENST00000396355 TBC1D21Q8IYX1 336 aa8.53□□□□□ -1.04
NDE1-202ENST00000396355 DAW1Q8N136 415 aa8.53□□□□□ -1.04
NDE1-202ENST00000396355 LRRC71Q8N4P6 559 aa8.53□□□□□ -1.04
NDE1-202ENST00000396355 DHRSXQ8N5I4 330 aa8.53□□□□□ -1.04
NDE1-202ENST00000396355 HES6Q96HZ4 224 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms