RNA–Protein interactions for RNA: ENST00000395978.7

BDNF-203, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,988 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-203ENST00000395978 RAB6CQ53S08 254 aa6.65□□□□□ -1.35
BDNF-203ENST00000395978 AARS2Q5JTZ9 985 aaKnown RBP6.65□□□□□ -1.35
BDNF-203ENST00000395978 TCHHL1Q5QJ38 904 aaPredicted RBP6.65□□□□□ -1.35
BDNF-203ENST00000395978 RNF219Q5W0B1 726 aaPredicted RBP6.65□□□□□ -1.35
BDNF-203ENST00000395978 FSTL4Q6MZW2 842 aa6.65□□□□□ -1.35
BDNF-203ENST00000395978 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.65□□□□□ -1.35
BDNF-203ENST00000395978 ULK2Q8IYT8 1036 aa6.65□□□□□ -1.35
BDNF-203ENST00000395978 ELMOD1Q8N336 334 aa6.65□□□□□ -1.35
BDNF-203ENST00000395978 RBM15BQ8NDT2 890 aaKnown RBP6.65□□□□□ -1.35
BDNF-203ENST00000395978 ZNF184Q99676 751 aaPredicted RBP6.65□□□□□ -1.35
BDNF-203ENST00000395978 MRPL57Q9BQC6 102 aaKnown RBP6.65□□□□□ -1.35
BDNF-203ENST00000395978 CADM1Q9BY67 442 aaKnown RBP6.65□□□□□ -1.35
BDNF-203ENST00000395978 RAB6CQ9H0N0 254 aa6.65□□□□□ -1.35
BDNF-203ENST00000395978 POMKQ9H5K3 350 aa6.65□□□□□ -1.35
BDNF-203ENST00000395978 VPS45Q9NRW7 570 aa6.65□□□□□ -1.35
BDNF-203ENST00000395978 RIC8BQ9NVN3 520 aa6.65□□□□□ -1.35
BDNF-203ENST00000395978 SEPT3Q9UH03 358 aa6.65□□□□□ -1.35
BDNF-203ENST00000395978 ZMYND8Q9ULU4 1186 aaPredicted RBP6.65□□□□□ -1.35
BDNF-203ENST00000395978 SNX10Q9Y5X0 201 aa6.65□□□□□ -1.35
BDNF-203ENST00000395978 H0Y626 953 aa6.64□□□□□ -1.35
BDNF-203ENST00000395978 NRP1O14786 923 aa6.64□□□□□ -1.35
BDNF-203ENST00000395978 SPTLC1O15269 473 aa6.64□□□□□ -1.35
BDNF-203ENST00000395978 MT-CO1P00395 513 aa6.64□□□□□ -1.35
BDNF-203ENST00000395978 LTA4HP09960 611 aaKnown RBP6.64□□□□□ -1.35
BDNF-203ENST00000395978 CCDC166P0CW27 439 aa6.64□□□□□ -1.35
BDNF-203ENST00000395978 COL6A2P12110 1019 aa6.64□□□□□ -1.35
BDNF-203ENST00000395978 COX4I1P13073 169 aa6.64□□□□□ -1.35
BDNF-203ENST00000395978 PRKAR2AP13861 404 aaKnown RBP6.64□□□□□ -1.35
BDNF-203ENST00000395978 LRPAP1P30533 357 aa6.64□□□□□ -1.35
BDNF-203ENST00000395978 SLC5A3P53794 718 aa6.64□□□□□ -1.35
BDNF-203ENST00000395978 POU4F1Q01851 419 aa6.64□□□□□ -1.35
BDNF-203ENST00000395978 PPIDQ08752 370 aaKnown RBP6.64□□□□□ -1.35
BDNF-203ENST00000395978 TSTA3Q13630 321 aaPredicted RBP6.64□□□□□ -1.35
BDNF-203ENST00000395978 PAFAH1B3Q15102 231 aaKnown RBP6.64□□□□□ -1.35
BDNF-203ENST00000395978 RIPOR1Q6ZS17 1223 aa6.64□□□□□ -1.35
BDNF-203ENST00000395978 TTC7BQ86TV6 843 aa6.64□□□□□ -1.35
BDNF-203ENST00000395978 APLFQ8IW19 511 aaPredicted RBP6.64□□□□□ -1.35
BDNF-203ENST00000395978 UNC5BQ8IZJ1 945 aa6.64□□□□□ -1.35
BDNF-203ENST00000395978 SPATA22Q8NHS9 363 aa6.64□□□□□ -1.35
BDNF-203ENST00000395978 USP13Q92995 863 aaPredicted RBP6.64□□□□□ -1.35
BDNF-203ENST00000395978 ZNF333Q96JL9 665 aa6.64□□□□□ -1.35
BDNF-203ENST00000395978 OMDQ99983 421 aa6.64□□□□□ -1.35
BDNF-203ENST00000395978 ADGRE3Q9BY15 652 aa6.64□□□□□ -1.35
BDNF-203ENST00000395978 KLHL4Q9C0H6 718 aa6.64□□□□□ -1.35
BDNF-203ENST00000395978 R3HDMLQ9H3Y0 253 aa6.64□□□□□ -1.35
BDNF-203ENST00000395978 IL1RL2Q9HB29 575 aa6.64□□□□□ -1.35
BDNF-203ENST00000395978 LATS2Q9NRM7 1088 aa6.64□□□□□ -1.35
BDNF-203ENST00000395978 CACNG4Q9UBN1 327 aa6.64□□□□□ -1.35
BDNF-203ENST00000395978 CRYL1Q9Y2S2 319 aa6.64□□□□□ -1.35
BDNF-203ENST00000395978 MYH9P35579 1960 aaKnown RBP6.64□□□□□ -1.35
BDNF-203ENST00000395978 RGSL1A5PLK6 1076 aa6.64□□□□□ -1.35
BDNF-203ENST00000395978 SYCE1LA8MT33 242 aa6.64□□□□□ -1.35
BDNF-203ENST00000395978 AKAP10O43572 662 aa6.64□□□□□ -1.35
BDNF-203ENST00000395978 CYBBP04839 570 aa6.64□□□□□ -1.35
BDNF-203ENST00000395978 ME2P23368 584 aa6.64□□□□□ -1.35
BDNF-203ENST00000395978 NEK3P51956 506 aa6.64□□□□□ -1.35
BDNF-203ENST00000395978 MAXP61244 160 aa6.64□□□□□ -1.35
BDNF-203ENST00000395978 CDH18Q13634 790 aa6.64□□□□□ -1.35
BDNF-203ENST00000395978 ITGA7Q13683 1181 aa6.64□□□□□ -1.35
BDNF-203ENST00000395978 METTL21CQ5VZV1 264 aa6.64□□□□□ -1.35
BDNF-203ENST00000395978 UGT3A1Q6NUS8 523 aa6.64□□□□□ -1.35
BDNF-203ENST00000395978 IRGCQ6NXR0 463 aa6.64□□□□□ -1.35
BDNF-203ENST00000395978 FAM117BQ6P1L5 589 aa6.64□□□□□ -1.35
BDNF-203ENST00000395978 PPP2R3CQ969Q6 453 aa6.64□□□□□ -1.35
BDNF-203ENST00000395978 SEMA3CQ99985 751 aa6.64□□□□□ -1.35
BDNF-203ENST00000395978 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.64□□□□□ -1.35
BDNF-203ENST00000395978 CDH19Q9H159 772 aa6.64□□□□□ -1.35
BDNF-203ENST00000395978 COG4Q9H9E3 785 aa6.64□□□□□ -1.35
BDNF-203ENST00000395978 ATP13A1Q9HD20 1204 aa6.64□□□□□ -1.35
BDNF-203ENST00000395978 SCUBE2Q9NQ36 999 aa6.64□□□□□ -1.35
BDNF-203ENST00000395978 TMPRSS4Q9NRS4 437 aa6.64□□□□□ -1.35
BDNF-203ENST00000395978 TAS2R13Q9NYV9 303 aa6.64□□□□□ -1.35
BDNF-203ENST00000395978 HACD3Q9P035 362 aa6.64□□□□□ -1.35
BDNF-203ENST00000395978 SCN9AQ15858 1988 aa6.64□□□□□ -1.35
BDNF-203ENST00000395978 A0A1W2PQH9 124 aa6.64□□□□□ -1.35
BDNF-203ENST00000395978 TCRBV5S1A1TA0A578 114 aa6.64□□□□□ -1.35
BDNF-203ENST00000395978 RBM47A0AV96 593 aaKnown RBP6.64□□□□□ -1.35
BDNF-203ENST00000395978 TBKBP1A7MCY6 615 aa6.64□□□□□ -1.35
BDNF-203ENST00000395978 MATN3O15232 486 aa6.64□□□□□ -1.35
BDNF-203ENST00000395978 SEPT4O43236 478 aa6.64□□□□□ -1.35
BDNF-203ENST00000395978 FAM189A1O60320 539 aa6.64□□□□□ -1.35
BDNF-203ENST00000395978 MAGEC1O60732 1142 aa6.64□□□□□ -1.35
BDNF-203ENST00000395978 GPR32O75388 356 aa6.64□□□□□ -1.35
BDNF-203ENST00000395978 TM7SF2O76062 418 aa6.64□□□□□ -1.35
BDNF-203ENST00000395978 OR4Q2P0C623 313 aa6.64□□□□□ -1.35
BDNF-203ENST00000395978 ZCCHC18P0CG32 403 aa6.64□□□□□ -1.35
BDNF-203ENST00000395978 EPHA3P29320 983 aa6.64□□□□□ -1.35
BDNF-203ENST00000395978 TKTP29401 623 aaKnown RBP6.64□□□□□ -1.35
BDNF-203ENST00000395978 TUFMP49411 452 aaKnown RBP6.64□□□□□ -1.35
BDNF-203ENST00000395978 KCNK10P57789 538 aa6.64□□□□□ -1.35
BDNF-203ENST00000395978 GRM3Q14832 879 aa6.64□□□□□ -1.35
BDNF-203ENST00000395978 SLC24A5Q71RS6 500 aa6.64□□□□□ -1.35
BDNF-203ENST00000395978 GET4Q7L5D6 327 aaPredicted RBP6.64□□□□□ -1.35
BDNF-203ENST00000395978 RNF148Q8N7C7 305 aa6.64□□□□□ -1.35
BDNF-203ENST00000395978 OLIG1Q8TAK6 271 aa6.64□□□□□ -1.35
BDNF-203ENST00000395978 PTCD2Q8WV60 388 aaKnown RBP6.64□□□□□ -1.35
BDNF-203ENST00000395978 BHMTQ93088 406 aa6.64□□□□□ -1.35
BDNF-203ENST00000395978 HAUS8Q9BT25 410 aa6.64□□□□□ -1.35
BDNF-203ENST00000395978 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.64□□□□□ -1.35
BDNF-203ENST00000395978 PRKAG3Q9UGI9 489 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms