RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 SLC2A11Q9BYW1 496 aa20.74■□□□□ 0.91
VCPKMT-202ENST00000395860 LRRC40Q9H9A6 602 aa20.74■□□□□ 0.91
VCPKMT-202ENST00000395860 VIPAS39Q9H9C1 493 aa20.74■□□□□ 0.91
VCPKMT-202ENST00000395860 GGA2Q9UJY4 613 aa20.74■□□□□ 0.91
VCPKMT-202ENST00000395860 INTS6Q9UL03 887 aaKnown RBP20.74■□□□□ 0.91
VCPKMT-202ENST00000395860 H3BQ06 376 aaPredicted RBP20.74■□□□□ 0.91
VCPKMT-202ENST00000395860 ALOX15BO15296 676 aa20.74■□□□□ 0.91
VCPKMT-202ENST00000395860 SUN1O94901 812 aa20.74■□□□□ 0.91
VCPKMT-202ENST00000395860 CD160O95971 181 aa20.74■□□□□ 0.91
VCPKMT-202ENST00000395860 PABPC1P11940 636 aaKnown RBP20.74■□□□□ 0.91
VCPKMT-202ENST00000395860 GEMIN4P57678 1058 aaKnown RBP20.74■□□□□ 0.91
VCPKMT-202ENST00000395860 DSC2Q02487 901 aa20.74■□□□□ 0.91
VCPKMT-202ENST00000395860 FCHO2Q0JRZ9 810 aa20.74■□□□□ 0.91
VCPKMT-202ENST00000395860 CYTH1Q15438 398 aa20.74■□□□□ 0.91
VCPKMT-202ENST00000395860 INO80DQ53TQ3 878 aaPredicted RBP20.74■□□□□ 0.91
VCPKMT-202ENST00000395860 ASTLQ6HA08 431 aaPredicted RBP20.74■□□□□ 0.91
VCPKMT-202ENST00000395860 LRRC8BQ6P9F7 803 aa20.74■□□□□ 0.91
VCPKMT-202ENST00000395860 KLHDC8BQ8IXV7 354 aa20.74■□□□□ 0.91
VCPKMT-202ENST00000395860 IMP4Q96G21 291 aaKnown RBP20.74■□□□□ 0.91
VCPKMT-202ENST00000395860 PSKH2Q96QS6 385 aa20.74■□□□□ 0.91
VCPKMT-202ENST00000395860 PLA2G2FQ9BZM2 168 aa20.74■□□□□ 0.91
VCPKMT-202ENST00000395860 MUSKO15146 869 aa20.73■□□□□ 0.91
VCPKMT-202ENST00000395860 HOXC11O43248 304 aaPredicted RBP20.73■□□□□ 0.91
VCPKMT-202ENST00000395860 TMCC1O94876 653 aa20.73■□□□□ 0.91
VCPKMT-202ENST00000395860 MLNP12872 115 aa20.73■□□□□ 0.91
VCPKMT-202ENST00000395860 PSMC3P17980 439 aa20.73■□□□□ 0.91
VCPKMT-202ENST00000395860 CD86P42081 329 aa20.73■□□□□ 0.91
VCPKMT-202ENST00000395860 NIPAL4Q0D2K0 466 aa20.73■□□□□ 0.91
VCPKMT-202ENST00000395860 MPP3Q13368 585 aa20.73■□□□□ 0.91
VCPKMT-202ENST00000395860 GRM2Q14416 872 aa20.73■□□□□ 0.91
VCPKMT-202ENST00000395860 FASTKD3Q14CZ7 662 aaKnown RBP20.73■□□□□ 0.91
VCPKMT-202ENST00000395860 DNAJC21Q5F1R6 531 aaKnown RBP20.73■□□□□ 0.91
VCPKMT-202ENST00000395860 NAPEPLDQ6IQ20 393 aa20.73■□□□□ 0.91
VCPKMT-202ENST00000395860 PARM1Q6UWI2 310 aa20.73■□□□□ 0.91
VCPKMT-202ENST00000395860 ANKMY2Q8IV38 441 aa20.73■□□□□ 0.91
VCPKMT-202ENST00000395860 SUSD6Q92537 303 aa20.73■□□□□ 0.91
VCPKMT-202ENST00000395860 FGF14Q92915 247 aa20.73■□□□□ 0.91
VCPKMT-202ENST00000395860 SEMA3CQ99985 751 aa20.73■□□□□ 0.91
VCPKMT-202ENST00000395860 MGME1Q9BQP7 344 aa20.73■□□□□ 0.91
VCPKMT-202ENST00000395860 NINJ2Q9NZG7 142 aa20.73■□□□□ 0.91
VCPKMT-202ENST00000395860 RIPK2O43353 540 aa20.72■□□□□ 0.91
VCPKMT-202ENST00000395860 USP12O75317 370 aa20.72■□□□□ 0.91
VCPKMT-202ENST00000395860 PMPCBO75439 489 aa20.72■□□□□ 0.91
VCPKMT-202ENST00000395860 OLIG2Q13516 323 aa20.72■□□□□ 0.91
VCPKMT-202ENST00000395860 CCDC85BQ15834 202 aaPredicted RBP20.72■□□□□ 0.91
VCPKMT-202ENST00000395860 KYNUQ16719 465 aa20.72■□□□□ 0.91
VCPKMT-202ENST00000395860 FUT11Q495W5 492 aa20.72■□□□□ 0.91
VCPKMT-202ENST00000395860 DENND2CQ68D51 928 aa20.72■□□□□ 0.91
VCPKMT-202ENST00000395860 LINC00523Q86TU6 105 aa20.72■□□□□ 0.91
VCPKMT-202ENST00000395860 IPMKQ8NFU5 416 aa20.72■□□□□ 0.91
VCPKMT-202ENST00000395860 ARRDC2Q8TBH0 407 aa20.72■□□□□ 0.91
VCPKMT-202ENST00000395860 PYROXD1Q8WU10 500 aa20.72■□□□□ 0.91
VCPKMT-202ENST00000395860 MYLIPQ8WY64 445 aa20.72■□□□□ 0.91
VCPKMT-202ENST00000395860 TTC25Q96NG3 672 aa20.72■□□□□ 0.91
VCPKMT-202ENST00000395860 FSD1LQ9BXM9 530 aa20.72■□□□□ 0.91
VCPKMT-202ENST00000395860 ACBD3Q9H3P7 528 aa20.72■□□□□ 0.91
VCPKMT-202ENST00000395860 ECT2Q9H8V3 914 aa20.72■□□□□ 0.91
VCPKMT-202ENST00000395860 TTC24A2A3L6 582 aaPredicted RBP20.72■□□□□ 0.91
VCPKMT-202ENST00000395860 ACSL3O95573 720 aa20.72■□□□□ 0.91
VCPKMT-202ENST00000395860 TTC4O95801 387 aa20.72■□□□□ 0.91
VCPKMT-202ENST00000395860 MAGEA3P43357 314 aa20.72■□□□□ 0.91
VCPKMT-202ENST00000395860 DMC1Q14565 340 aa20.72■□□□□ 0.91
VCPKMT-202ENST00000395860 ALS2CLQ60I27 953 aa20.72■□□□□ 0.91
VCPKMT-202ENST00000395860 ALG1LQ6GMV1 187 aa20.72■□□□□ 0.91
VCPKMT-202ENST00000395860 MTSS1LQ765P7 747 aa20.72■□□□□ 0.91
VCPKMT-202ENST00000395860 PRPF39Q86UA1 669 aaKnown RBP20.72■□□□□ 0.91
VCPKMT-202ENST00000395860 FBXO36Q8NEA4 188 aa20.72■□□□□ 0.91
VCPKMT-202ENST00000395860 OR52K1Q8NGK4 314 aa20.72■□□□□ 0.91
VCPKMT-202ENST00000395860 TBL1YQ9BQ87 522 aa20.72■□□□□ 0.91
VCPKMT-202ENST00000395860 EPB41L4BQ9H329 900 aa20.72■□□□□ 0.91
VCPKMT-202ENST00000395860 VPS45Q9NRW7 570 aa20.72■□□□□ 0.91
VCPKMT-202ENST00000395860 PLAAQ9Y263 795 aa20.72■□□□□ 0.91
VCPKMT-202ENST00000395860 ANKRD36A6QL64 1941 aa20.71■□□□□ 0.91
VCPKMT-202ENST00000395860 ECI2O75521 394 aa20.71■□□□□ 0.91
VCPKMT-202ENST00000395860 MMP2P08253 660 aa20.71■□□□□ 0.91
VCPKMT-202ENST00000395860 SP100P23497 879 aaPredicted RBP20.71■□□□□ 0.91
VCPKMT-202ENST00000395860 ELK3P41970 407 aa20.71■□□□□ 0.91
VCPKMT-202ENST00000395860 DGKGP49619 791 aa20.71■□□□□ 0.91
VCPKMT-202ENST00000395860 SERPINH1P50454 418 aaKnown RBP20.71■□□□□ 0.91
VCPKMT-202ENST00000395860 NR1H3Q13133 447 aa20.71■□□□□ 0.91
VCPKMT-202ENST00000395860 CBLBQ13191 982 aa20.71■□□□□ 0.91
VCPKMT-202ENST00000395860 SLC29A2Q14542 456 aa20.71■□□□□ 0.91
VCPKMT-202ENST00000395860 SKIV2LQ15477 1246 aaKnown RBP20.71■□□□□ 0.91
VCPKMT-202ENST00000395860 PCSK7Q16549 785 aa20.71■□□□□ 0.91
VCPKMT-202ENST00000395860 UBAP2Q5T6F2 1119 aaKnown RBP20.71■□□□□ 0.91
VCPKMT-202ENST00000395860 AHI1Q8N157 1196 aa20.71■□□□□ 0.91
VCPKMT-202ENST00000395860 CPA6Q8N4T0 437 aa20.71■□□□□ 0.91
VCPKMT-202ENST00000395860 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.71■□□□□ 0.91
VCPKMT-202ENST00000395860 DNAAF3Q8N9W5 541 aa20.71■□□□□ 0.91
VCPKMT-202ENST00000395860 EXOC2Q96KP1 924 aa20.71■□□□□ 0.91
VCPKMT-202ENST00000395860 ZIM3Q96PE6 472 aa20.71■□□□□ 0.91
VCPKMT-202ENST00000395860 APOL2Q9BQE5 337 aa20.71■□□□□ 0.91
VCPKMT-202ENST00000395860 FICDQ9BVA6 458 aa20.71■□□□□ 0.91
VCPKMT-202ENST00000395860 HPS4Q9NQG7 708 aa20.71■□□□□ 0.91
VCPKMT-202ENST00000395860 PIH1D1Q9NWS0 290 aaKnown RBP20.71■□□□□ 0.91
VCPKMT-202ENST00000395860 FBXO10Q9UK96 956 aa20.71■□□□□ 0.91
VCPKMT-202ENST00000395860 CHMP2BQ9UQN3 213 aa20.71■□□□□ 0.91
VCPKMT-202ENST00000395860 FCF1Q9Y324 198 aaKnown RBP20.71■□□□□ 0.91
VCPKMT-202ENST00000395860 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.71■□□□□ 0.91
VCPKMT-202ENST00000395860 MT-CO1P00395 513 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms