RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 E5RJQ4 531 aa6.33□□□□□ -1.4
PTPN20-208ENST00000395727 THAP12O43422 761 aa6.33□□□□□ -1.4
PTPN20-208ENST00000395727 SYNCRIPO60506 623 aaKnown RBP6.33□□□□□ -1.4
PTPN20-208ENST00000395727 HSF2BPO75031 334 aa6.33□□□□□ -1.4
PTPN20-208ENST00000395727 LETM1O95202 739 aaPredicted RBP6.33□□□□□ -1.4
PTPN20-208ENST00000395727 KCNK5O95279 499 aa6.33□□□□□ -1.4
PTPN20-208ENST00000395727 TRUB2O95900 331 aaKnown RBP6.33□□□□□ -1.4
PTPN20-208ENST00000395727 APOEP02649 317 aa6.33□□□□□ -1.4
PTPN20-208ENST00000395727 ATP5BP06576 529 aaKnown RBP6.33□□□□□ -1.4
PTPN20-208ENST00000395727 SRPRAP08240 638 aaKnown RBP6.33□□□□□ -1.4
PTPN20-208ENST00000395727 KRT5P13647 590 aa6.33□□□□□ -1.4
PTPN20-208ENST00000395727 SLC9A1P19634 815 aa6.33□□□□□ -1.4
PTPN20-208ENST00000395727 PRKCHP24723 683 aa6.33□□□□□ -1.4
PTPN20-208ENST00000395727 CD6P30203 668 aa6.33□□□□□ -1.4
PTPN20-208ENST00000395727 SSTR4P31391 388 aa6.33□□□□□ -1.4
PTPN20-208ENST00000395727 SLC6A4P31645 630 aa6.33□□□□□ -1.4
PTPN20-208ENST00000395727 WASP42768 502 aa6.33□□□□□ -1.4
PTPN20-208ENST00000395727 MTIF2P46199 727 aaKnown RBP6.33□□□□□ -1.4
PTPN20-208ENST00000395727 GABRB2P47870 512 aa6.33□□□□□ -1.4
PTPN20-208ENST00000395727 TPMTP51580 245 aa6.33□□□□□ -1.4
PTPN20-208ENST00000395727 IRX4P78413 519 aa6.33□□□□□ -1.4
PTPN20-208ENST00000395727 SLC14A1Q13336 389 aa6.33□□□□□ -1.4
PTPN20-208ENST00000395727 HNRNPDQ14103 355 aaKnown RBP6.33□□□□□ -1.4
PTPN20-208ENST00000395727 CCDC6Q16204 474 aa6.33□□□□□ -1.4
PTPN20-208ENST00000395727 C5orf22Q49AR2 442 aa6.33□□□□□ -1.4
PTPN20-208ENST00000395727 VWA3BQ502W6 1294 aa6.33□□□□□ -1.4
PTPN20-208ENST00000395727 TRIM61Q5EBN2 209 aa6.33□□□□□ -1.4
PTPN20-208ENST00000395727 EFHC1Q5JVL4 640 aa6.33□□□□□ -1.4
PTPN20-208ENST00000395727 WDR45BQ5MNZ6 344 aa6.33□□□□□ -1.4
PTPN20-208ENST00000395727 SYCP2LQ5T4T6 812 aa6.33□□□□□ -1.4
PTPN20-208ENST00000395727 CDCP2Q5VXM1 449 aa6.33□□□□□ -1.4
PTPN20-208ENST00000395727 SYPL2Q5VXT5 272 aa6.33□□□□□ -1.4
PTPN20-208ENST00000395727 NADSYN1Q6IA69 706 aa6.33□□□□□ -1.4
PTPN20-208ENST00000395727 DENND1BQ6P3S1 775 aa6.33□□□□□ -1.4
PTPN20-208ENST00000395727 SERPINA13PQ6UXR4 307 aa6.33□□□□□ -1.4
PTPN20-208ENST00000395727 C22orf34Q6ZV56 151 aa6.33□□□□□ -1.4
PTPN20-208ENST00000395727 CHST9Q7L1S5 443 aa6.33□□□□□ -1.4
PTPN20-208ENST00000395727 ARCQ7LC44 396 aa6.33□□□□□ -1.4
PTPN20-208ENST00000395727 TAC4Q86UU9 113 aa6.33□□□□□ -1.4
PTPN20-208ENST00000395727 TMPRSS6Q8IU80 811 aa6.33□□□□□ -1.4
PTPN20-208ENST00000395727 MFN1Q8IWA4 741 aa6.33□□□□□ -1.4
PTPN20-208ENST00000395727 TMEFF1Q8IYR6 380 aa6.33□□□□□ -1.4
PTPN20-208ENST00000395727 FRMD1Q8N878 549 aa6.33□□□□□ -1.4
PTPN20-208ENST00000395727 ATP6V0D2Q8N8Y2 350 aa6.33□□□□□ -1.4
PTPN20-208ENST00000395727 FAM181AQ8N9Y4 354 aa6.33□□□□□ -1.4
PTPN20-208ENST00000395727 C1orf131Q8NDD1 294 aaKnown RBP6.33□□□□□ -1.4
PTPN20-208ENST00000395727 OR2T3Q8NH03 318 aa6.33□□□□□ -1.4
PTPN20-208ENST00000395727 ENOX1Q8TC92 643 aaKnown RBP6.33□□□□□ -1.4
PTPN20-208ENST00000395727 RLN3Q8WXF3 142 aa6.33□□□□□ -1.4
PTPN20-208ENST00000395727 PIGKQ92643 395 aa6.33□□□□□ -1.4
PTPN20-208ENST00000395727 PRCCQ92733 491 aaPredicted RBP6.33□□□□□ -1.4
PTPN20-208ENST00000395727 NT5C3BQ969T7 300 aa6.33□□□□□ -1.4
PTPN20-208ENST00000395727 FAM149B1Q96BN6 582 aa6.33□□□□□ -1.4
PTPN20-208ENST00000395727 PGAP3Q96FM1 320 aaPredicted RBP6.33□□□□□ -1.4
PTPN20-208ENST00000395727 CPXM1Q96SM3 734 aa6.33□□□□□ -1.4
PTPN20-208ENST00000395727 PRMT1Q99873 361 aaKnown RBP6.33□□□□□ -1.4
PTPN20-208ENST00000395727 TUBGCP2Q9BSJ2 902 aa6.33□□□□□ -1.4
PTPN20-208ENST00000395727 CRACR2AQ9BSW2 395 aa6.33□□□□□ -1.4
PTPN20-208ENST00000395727 NAA15Q9BXJ9 866 aaKnown RBP6.33□□□□□ -1.4
PTPN20-208ENST00000395727 ZDHHC5Q9C0B5 715 aa6.33□□□□□ -1.4
PTPN20-208ENST00000395727 SMOC1Q9H4F8 434 aa6.33□□□□□ -1.4
PTPN20-208ENST00000395727 PLCB1Q9NQ66 1216 aa6.33□□□□□ -1.4
PTPN20-208ENST00000395727 ST7Q9NRC1 585 aa6.33□□□□□ -1.4
PTPN20-208ENST00000395727 LMBRD1Q9NUN5 540 aa6.33□□□□□ -1.4
PTPN20-208ENST00000395727 TMEM74BQ9NUR3 256 aa6.33□□□□□ -1.4
PTPN20-208ENST00000395727 ABCB8Q9NUT2 735 aa6.33□□□□□ -1.4
PTPN20-208ENST00000395727 TPX2Q9ULW0 747 aaKnown RBP6.33□□□□□ -1.4
PTPN20-208ENST00000395727 PLA2G4CQ9UP65 541 aa6.33□□□□□ -1.4
PTPN20-208ENST00000395727 NAALADL1Q9UQQ1 740 aa6.33□□□□□ -1.4
PTPN20-208ENST00000395727 INVSQ9Y283 1065 aa6.33□□□□□ -1.4
PTPN20-208ENST00000395727 CEP83Q9Y592 693 aa6.33□□□□□ -1.4
PTPN20-208ENST00000395727 RAD54BQ9Y620 910 aa6.33□□□□□ -1.4
PTPN20-208ENST00000395727 FRYLO94915 3013 aa6.33□□□□□ -1.4
PTPN20-208ENST00000395727 ATG2BQ96BY7 2078 aa6.32□□□□□ -1.4
PTPN20-208ENST00000395727 CXorf51AA0A1B0GTR3 108 aa6.32□□□□□ -1.4
PTPN20-208ENST00000395727 A0A1B0GVM2 712 aa6.32□□□□□ -1.4
PTPN20-208ENST00000395727 TCAF2A6NFQ2 919 aa6.32□□□□□ -1.4
PTPN20-208ENST00000395727 C4orf47A7E2U8 309 aa6.32□□□□□ -1.4
PTPN20-208ENST00000395727 PATE3B3GLJ2 98 aa6.32□□□□□ -1.4
PTPN20-208ENST00000395727 KCNJ18B7U540 433 aa6.32□□□□□ -1.4
PTPN20-208ENST00000395727 CAPN9O14815 690 aa6.32□□□□□ -1.4
PTPN20-208ENST00000395727 HYAL3O43820 417 aaPredicted RBP6.32□□□□□ -1.4
PTPN20-208ENST00000395727 NDUFS2O75306 463 aa6.32□□□□□ -1.4
PTPN20-208ENST00000395727 DAB1O75553 588 aa6.32□□□□□ -1.4
PTPN20-208ENST00000395727 GJB3O75712 270 aa6.32□□□□□ -1.4
PTPN20-208ENST00000395727 LUC7L3O95232 432 aaKnown RBP6.32□□□□□ -1.4
PTPN20-208ENST00000395727 LSM8O95777 96 aaKnown RBP6.32□□□□□ -1.4
PTPN20-208ENST00000395727 PRNPP04156 253 aa6.32□□□□□ -1.4
PTPN20-208ENST00000395727 EPHX1P07099 455 aa6.32□□□□□ -1.4
PTPN20-208ENST00000395727 SYPP08247 313 aa6.32□□□□□ -1.4
PTPN20-208ENST00000395727 ZNF883P0CG24 379 aa6.32□□□□□ -1.4
PTPN20-208ENST00000395727 IMPDH2P12268 514 aa6.32□□□□□ -1.4
PTPN20-208ENST00000395727 ENGP17813 658 aa6.32□□□□□ -1.4
PTPN20-208ENST00000395727 POLR2EP19388 210 aaKnown RBP6.32□□□□□ -1.4
PTPN20-208ENST00000395727 CCR1P32246 355 aa6.32□□□□□ -1.4
PTPN20-208ENST00000395727 ANP32AP39687 249 aaKnown RBP6.32□□□□□ -1.4
PTPN20-208ENST00000395727 SGSHP51688 502 aa6.32□□□□□ -1.4
PTPN20-208ENST00000395727 PLK1P53350 603 aa6.32□□□□□ -1.4
PTPN20-208ENST00000395727 ARID5AQ03989 594 aa6.32□□□□□ -1.4
PTPN20-208ENST00000395727 GFPT1Q06210 699 aaPredicted RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms