RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 LMO7Q8WWI1 1683 aa12.7□□□□□ -0.38
SLC28A1-203ENST00000394573 ZNF142P52746 1687 aaPredicted RBP12.7□□□□□ -0.38
SLC28A1-203ENST00000394573 M0R3G1 203 aa12.69□□□□□ -0.38
SLC28A1-203ENST00000394573 SLC22A1O15245 554 aa12.69□□□□□ -0.38
SLC28A1-203ENST00000394573 KRT1P04264 644 aa12.69□□□□□ -0.38
SLC28A1-203ENST00000394573 KRT7P08729 469 aa12.69□□□□□ -0.38
SLC28A1-203ENST00000394573 MBL2P11226 248 aaPredicted RBP12.69□□□□□ -0.38
SLC28A1-203ENST00000394573 GZMAP12544 262 aa12.69□□□□□ -0.38
SLC28A1-203ENST00000394573 TFE3P19532 575 aaPredicted RBP12.69□□□□□ -0.38
SLC28A1-203ENST00000394573 SOX11P35716 441 aa12.69□□□□□ -0.38
SLC28A1-203ENST00000394573 KRT20P35900 424 aa12.69□□□□□ -0.38
SLC28A1-203ENST00000394573 N4BP2L1Q5TBK1 243 aaPredicted RBP12.69□□□□□ -0.38
SLC28A1-203ENST00000394573 NXNQ6DKJ4 435 aa12.69□□□□□ -0.38
SLC28A1-203ENST00000394573 SLC16A12Q6ZSM3 486 aa12.69□□□□□ -0.38
SLC28A1-203ENST00000394573 DGLUCYQ7Z3D6 616 aa12.69□□□□□ -0.38
SLC28A1-203ENST00000394573 MAPKAPK5Q8IW41 473 aa12.69□□□□□ -0.38
SLC28A1-203ENST00000394573 BCL7CQ8WUZ0 217 aaPredicted RBP12.69□□□□□ -0.38
SLC28A1-203ENST00000394573 S100ZQ8WXG8 99 aa12.69□□□□□ -0.38
SLC28A1-203ENST00000394573 CELF1Q92879 486 aaKnown RBP12.69□□□□□ -0.38
SLC28A1-203ENST00000394573 NTN4Q9HB63 628 aa12.69□□□□□ -0.38
SLC28A1-203ENST00000394573 ZNF277Q9NRM2 450 aaPredicted RBP12.69□□□□□ -0.38
SLC28A1-203ENST00000394573 TMLHEQ9NVH6 421 aa12.69□□□□□ -0.38
SLC28A1-203ENST00000394573 MOCS1Q9NZB8 636 aa12.69□□□□□ -0.38
SLC28A1-203ENST00000394573 IPO11Q9UI26 975 aaKnown RBP12.69□□□□□ -0.38
SLC28A1-203ENST00000394573 TEKT2Q9UIF3 430 aa12.69□□□□□ -0.38
SLC28A1-203ENST00000394573 NFASCO94856 1347 aa12.69□□□□□ -0.38
SLC28A1-203ENST00000394573 GSRP00390 522 aa12.69□□□□□ -0.38
SLC28A1-203ENST00000394573 CSH1P0DML2 217 aa12.69□□□□□ -0.38
SLC28A1-203ENST00000394573 CSH2P0DML3 217 aa12.69□□□□□ -0.38
SLC28A1-203ENST00000394573 CYP11B1P15538 503 aa12.69□□□□□ -0.38
SLC28A1-203ENST00000394573 VBP1P61758 197 aa12.69□□□□□ -0.38
SLC28A1-203ENST00000394573 PPP3CAQ08209 521 aa12.69□□□□□ -0.38
SLC28A1-203ENST00000394573 AASDHQ4L235 1098 aaPredicted RBP12.69□□□□□ -0.38
SLC28A1-203ENST00000394573 COLEC12Q5KU26 742 aa12.69□□□□□ -0.38
SLC28A1-203ENST00000394573 TXNRD3NBQ6F5E7 133 aa12.69□□□□□ -0.38
SLC28A1-203ENST00000394573 ERAP2Q6P179 960 aa12.69□□□□□ -0.38
SLC28A1-203ENST00000394573 RHOT1Q8IXI2 618 aa12.69□□□□□ -0.38
SLC28A1-203ENST00000394573 NAT8LQ8N9F0 302 aa12.69□□□□□ -0.38
SLC28A1-203ENST00000394573 GLB1L3Q8NCI6 653 aaPredicted RBP12.69□□□□□ -0.38
SLC28A1-203ENST00000394573 SLAIN1Q8ND83 568 aa12.69□□□□□ -0.38
SLC28A1-203ENST00000394573 KCTD4Q8WVF5 259 aa12.69□□□□□ -0.38
SLC28A1-203ENST00000394573 KREMEN1Q96MU8 473 aa12.69□□□□□ -0.38
SLC28A1-203ENST00000394573 RMDN3Q96TC7 470 aa12.69□□□□□ -0.38
SLC28A1-203ENST00000394573 IGSF5Q9NSI5 407 aa12.69□□□□□ -0.38
SLC28A1-203ENST00000394573 DPP3Q9NY33 737 aa12.69□□□□□ -0.38
SLC28A1-203ENST00000394573 SUCOQ9UBS9 1254 aaKnown RBP12.69□□□□□ -0.38
SLC28A1-203ENST00000394573 PCDHGC3Q9UN70 934 aa12.69□□□□□ -0.38
SLC28A1-203ENST00000394573 RGSL1A5PLK6 1076 aa12.69□□□□□ -0.38
SLC28A1-203ENST00000394573 WTIPA6NIX2 430 aaPredicted RBP12.69□□□□□ -0.38
SLC28A1-203ENST00000394573 SLC9A3R1O14745 358 aaPredicted RBP12.69□□□□□ -0.38
SLC28A1-203ENST00000394573 PEX14O75381 377 aa12.69□□□□□ -0.38
SLC28A1-203ENST00000394573 TRIM16O95361 564 aa12.69□□□□□ -0.38
SLC28A1-203ENST00000394573 SEC24AO95486 1093 aa12.69□□□□□ -0.38
SLC28A1-203ENST00000394573 RPL22P35268 128 aaKnown RBP12.69□□□□□ -0.38
SLC28A1-203ENST00000394573 ABCE1P61221 599 aaKnown RBP12.69□□□□□ -0.38
SLC28A1-203ENST00000394573 TFAMQ00059 246 aaKnown RBP12.69□□□□□ -0.38
SLC28A1-203ENST00000394573 CDC20Q12834 499 aa12.69□□□□□ -0.38
SLC28A1-203ENST00000394573 RAP1GAP2Q684P5 730 aa12.69□□□□□ -0.38
SLC28A1-203ENST00000394573 PGAM4Q8N0Y7 254 aa12.69□□□□□ -0.38
SLC28A1-203ENST00000394573 SIMC1Q8NDZ2 872 aa12.69□□□□□ -0.38
SLC28A1-203ENST00000394573 FAM84AQ96KN4 292 aa12.69□□□□□ -0.38
SLC28A1-203ENST00000394573 IER2Q9BTL4 223 aa12.69□□□□□ -0.38
SLC28A1-203ENST00000394573 SLC35C2Q9NQQ7 365 aa12.69□□□□□ -0.38
SLC28A1-203ENST00000394573 RIPK3Q9Y572 518 aa12.69□□□□□ -0.38
SLC28A1-203ENST00000394573 EI24O14681 340 aa12.68□□□□□ -0.38
SLC28A1-203ENST00000394573 SNAP29O95721 258 aa12.68□□□□□ -0.38
SLC28A1-203ENST00000394573 CPNE6O95741 557 aa12.68□□□□□ -0.38
SLC28A1-203ENST00000394573 MT-ND1P03886 318 aa12.68□□□□□ -0.38
SLC28A1-203ENST00000394573 RBP1P09455 135 aa12.68□□□□□ -0.38
SLC28A1-203ENST00000394573 HDCP19113 662 aa12.68□□□□□ -0.38
SLC28A1-203ENST00000394573 RHDQ02161 417 aa12.68□□□□□ -0.38
SLC28A1-203ENST00000394573 ILF2Q12905 390 aaKnown RBP12.68□□□□□ -0.38
SLC28A1-203ENST00000394573 COL19A1Q14993 1142 aa12.68□□□□□ -0.38
SLC28A1-203ENST00000394573 SLC36A3Q495N2 470 aa12.68□□□□□ -0.38
SLC28A1-203ENST00000394573 ERMP1Q7Z2K6 904 aa12.68□□□□□ -0.38
SLC28A1-203ENST00000394573 SLC44A5Q8NCS7 719 aa12.68□□□□□ -0.38
SLC28A1-203ENST00000394573 RPL10LQ96L21 214 aaKnown RBP12.68□□□□□ -0.38
SLC28A1-203ENST00000394573 TCF7L2Q9NQB0 619 aa12.68□□□□□ -0.38
SLC28A1-203ENST00000394573 PCSK1NQ9UHG2 260 aa12.68□□□□□ -0.38
SLC28A1-203ENST00000394573 OAZ3Q9UMX2 235 aa12.68□□□□□ -0.38
SLC28A1-203ENST00000394573 KRT87PA6NCN2 255 aa12.68□□□□□ -0.38
SLC28A1-203ENST00000394573 TRIM64A6NGJ6 449 aa12.68□□□□□ -0.38
SLC28A1-203ENST00000394573 FADS2P1A8MWK0 482 aa12.68□□□□□ -0.38
SLC28A1-203ENST00000394573 IL7RP16871 459 aa12.68□□□□□ -0.38
SLC28A1-203ENST00000394573 GARSP41250 739 aaKnown RBP12.68□□□□□ -0.38
SLC28A1-203ENST00000394573 HLCSP50747 726 aa12.68□□□□□ -0.38
SLC28A1-203ENST00000394573 PSMC5P62195 406 aa12.68□□□□□ -0.38
SLC28A1-203ENST00000394573 IMPG1Q17R60 797 aa12.68□□□□□ -0.38
SLC28A1-203ENST00000394573 AGAP6Q5VW22 663 aa12.68□□□□□ -0.38
SLC28A1-203ENST00000394573 LRRC8EQ6NSJ5 796 aa12.68□□□□□ -0.38
SLC28A1-203ENST00000394573 BBS12Q6ZW61 710 aa12.68□□□□□ -0.38
SLC28A1-203ENST00000394573 SYTL1Q8IYJ3 562 aa12.68□□□□□ -0.38
SLC28A1-203ENST00000394573 MAGEE2Q8TD90 523 aaPredicted RBP12.68□□□□□ -0.38
SLC28A1-203ENST00000394573 FKBP10Q96AY3 582 aa12.68□□□□□ -0.38
SLC28A1-203ENST00000394573 NRBF2Q96F24 287 aa12.68□□□□□ -0.38
SLC28A1-203ENST00000394573 CNDP1Q96KN2 507 aa12.68□□□□□ -0.38
SLC28A1-203ENST00000394573 AGAP4Q96P64 663 aa12.68□□□□□ -0.38
SLC28A1-203ENST00000394573 KCTD14Q9BQ13 255 aaPredicted RBP12.68□□□□□ -0.38
SLC28A1-203ENST00000394573 REXO4Q9GZR2 422 aaKnown RBP12.68□□□□□ -0.38
SLC28A1-203ENST00000394573 LRRC40Q9H9A6 602 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms