RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 ANKRD52Q8NB46 1076 aa10.12□□□□□ -0.79
PSEN1-204ENST00000394164 C12orf43Q96C57 262 aaKnown RBP10.12□□□□□ -0.79
PSEN1-204ENST00000394164 MARK4Q96L34 752 aa10.12□□□□□ -0.79
PSEN1-204ENST00000394164 HNRNPABQ99729 332 aaKnown RBP10.12□□□□□ -0.79
PSEN1-204ENST00000394164 NEURL2Q9BR09 285 aa10.12□□□□□ -0.79
PSEN1-204ENST00000394164 TMEM79Q9BSE2 394 aa10.12□□□□□ -0.79
PSEN1-204ENST00000394164 PPCSQ9HAB8 311 aa10.12□□□□□ -0.79
PSEN1-204ENST00000394164 LRRC4Q9HBW1 653 aa10.12□□□□□ -0.79
PSEN1-204ENST00000394164 IPPQ9Y573 584 aa10.12□□□□□ -0.79
PSEN1-204ENST00000394164 GIPC1O14908 333 aa10.12□□□□□ -0.79
PSEN1-204ENST00000394164 CHADO15335 359 aa10.12□□□□□ -0.79
PSEN1-204ENST00000394164 ZBTB14O43829 449 aa10.12□□□□□ -0.79
PSEN1-204ENST00000394164 KRT37O76014 449 aa10.12□□□□□ -0.79
PSEN1-204ENST00000394164 KLHL2O95198 593 aa10.12□□□□□ -0.79
PSEN1-204ENST00000394164 BPGMP07738 259 aa10.12□□□□□ -0.79
PSEN1-204ENST00000394164 SNRPAP09012 282 aaKnown RBP10.12□□□□□ -0.79
PSEN1-204ENST00000394164 COX4I1P13073 169 aa10.12□□□□□ -0.79
PSEN1-204ENST00000394164 PSMB4P28070 264 aa10.12□□□□□ -0.79
PSEN1-204ENST00000394164 SLC1A6P48664 564 aa10.12□□□□□ -0.79
PSEN1-204ENST00000394164 IDH3AP50213 366 aa10.12□□□□□ -0.79
PSEN1-204ENST00000394164 BCAT1P54687 386 aa10.12□□□□□ -0.79
PSEN1-204ENST00000394164 LILRA4P59901 499 aa10.12□□□□□ -0.79
PSEN1-204ENST00000394164 MS4A2Q01362 244 aa10.12□□□□□ -0.79
PSEN1-204ENST00000394164 POU5F1BQ06416 359 aa10.12□□□□□ -0.79
PSEN1-204ENST00000394164 BNIP3Q12983 259 aa10.12□□□□□ -0.79
PSEN1-204ENST00000394164 CYP2A13Q16696 494 aa10.12□□□□□ -0.79
PSEN1-204ENST00000394164 NCBP2-AS2Q69YL0 99 aa10.12□□□□□ -0.79
PSEN1-204ENST00000394164 SLC9A4Q6AI14 798 aa10.12□□□□□ -0.79
PSEN1-204ENST00000394164 SAPCD2Q86UD0 394 aa10.12□□□□□ -0.79
PSEN1-204ENST00000394164 COLGALT1Q8NBJ5 622 aa10.12□□□□□ -0.79
PSEN1-204ENST00000394164 B3GALNT2Q8NCR0 500 aa10.12□□□□□ -0.79
PSEN1-204ENST00000394164 DDHD1Q8NEL9 900 aa10.12□□□□□ -0.79
PSEN1-204ENST00000394164 PIWIL2Q8TC59 973 aaKnown RBP10.12□□□□□ -0.79
PSEN1-204ENST00000394164 SIRPGQ9P1W8 387 aa10.12□□□□□ -0.79
PSEN1-204ENST00000394164 KIAA1257Q9ULG3 409 aa10.12□□□□□ -0.79
PSEN1-204ENST00000394164 UBQLN1Q9UMX0 589 aaKnown RBP10.12□□□□□ -0.79
PSEN1-204ENST00000394164 PSAT1Q9Y617 370 aa10.12□□□□□ -0.79
PSEN1-204ENST00000394164 A0A1W2PPW3 197 aa10.11□□□□□ -0.79
PSEN1-204ENST00000394164 C7orf72A4D263 438 aa10.11□□□□□ -0.79
PSEN1-204ENST00000394164 RNF103O00237 685 aa10.11□□□□□ -0.79
PSEN1-204ENST00000394164 MATN2O00339 956 aa10.11□□□□□ -0.79
PSEN1-204ENST00000394164 NRP1O14786 923 aa10.11□□□□□ -0.79
PSEN1-204ENST00000394164 KLF11O14901 512 aa10.11□□□□□ -0.79
PSEN1-204ENST00000394164 RFPL1O75677 317 aa10.11□□□□□ -0.79
PSEN1-204ENST00000394164 USP17L7P0C7H9 530 aa10.11□□□□□ -0.79
PSEN1-204ENST00000394164 ERVK-10P10266 1014 aa10.11□□□□□ -0.79
PSEN1-204ENST00000394164 UGT1A6P19224 532 aa10.11□□□□□ -0.79
PSEN1-204ENST00000394164 TGM2P21980 687 aa10.11□□□□□ -0.79
PSEN1-204ENST00000394164 CDH3P22223 829 aa10.11□□□□□ -0.79
PSEN1-204ENST00000394164 UGT1A1P22309 533 aa10.11□□□□□ -0.79
PSEN1-204ENST00000394164 UGT1A4P22310 534 aa10.11□□□□□ -0.79
PSEN1-204ENST00000394164 UGT1A3P35503 534 aa10.11□□□□□ -0.79
PSEN1-204ENST00000394164 UGT1A5P35504 534 aa10.11□□□□□ -0.79
PSEN1-204ENST00000394164 TAF6P49848 677 aa10.11□□□□□ -0.79
PSEN1-204ENST00000394164 CLCN2P51788 898 aa10.11□□□□□ -0.79
PSEN1-204ENST00000394164 TBCCQ15814 346 aa10.11□□□□□ -0.79
PSEN1-204ENST00000394164 PPM1JQ5JR12 505 aa10.11□□□□□ -0.79
PSEN1-204ENST00000394164 NANOGP8Q6NSW7 305 aa10.11□□□□□ -0.79
PSEN1-204ENST00000394164 ZNF534Q76KX8 674 aa10.11□□□□□ -0.79
PSEN1-204ENST00000394164 SIX6OS1Q8N1H7 587 aa10.11□□□□□ -0.79
PSEN1-204ENST00000394164 HTR3CQ8WXA8 447 aa10.11□□□□□ -0.79
PSEN1-204ENST00000394164 ISOC1Q96CN7 298 aa10.11□□□□□ -0.79
PSEN1-204ENST00000394164 CMTM5Q96DZ9 223 aa10.11□□□□□ -0.79
PSEN1-204ENST00000394164 PLEKHA8Q96JA3 519 aa10.11□□□□□ -0.79
PSEN1-204ENST00000394164 GAD1Q99259 594 aa10.11□□□□□ -0.79
PSEN1-204ENST00000394164 HAUS8Q9BT25 410 aa10.11□□□□□ -0.79
PSEN1-204ENST00000394164 NACA2Q9H009 215 aa10.11□□□□□ -0.79
PSEN1-204ENST00000394164 C6orf203Q9P0P8 240 aaPredicted RBP10.11□□□□□ -0.79
PSEN1-204ENST00000394164 NUDT5Q9UKK9 219 aa10.11□□□□□ -0.79
PSEN1-204ENST00000394164 FAM32AQ9Y421 112 aaKnown RBP10.11□□□□□ -0.79
PSEN1-204ENST00000394164 ZNF638Q14966 1978 aaKnown RBP10.11□□□□□ -0.79
PSEN1-204ENST00000394164 LOC285556D6RIA3 1793 aa10.11□□□□□ -0.79
PSEN1-204ENST00000394164 ATE1O95260 518 aa10.11□□□□□ -0.79
PSEN1-204ENST00000394164 APOEP02649 317 aa10.11□□□□□ -0.79
PSEN1-204ENST00000394164 TPH1P17752 444 aa10.11□□□□□ -0.79
PSEN1-204ENST00000394164 TKTL1P51854 596 aa10.11□□□□□ -0.79
PSEN1-204ENST00000394164 GNA12Q03113 381 aa10.11□□□□□ -0.79
PSEN1-204ENST00000394164 WASHC5Q12768 1159 aa10.11□□□□□ -0.79
PSEN1-204ENST00000394164 ITGADQ13349 1161 aa10.11□□□□□ -0.79
PSEN1-204ENST00000394164 ZBTB6Q15916 424 aa10.11□□□□□ -0.79
PSEN1-204ENST00000394164 LDLRAP1Q5SW96 308 aa10.11□□□□□ -0.79
PSEN1-204ENST00000394164 KIAA0319Q5VV43 1072 aa10.11□□□□□ -0.79
PSEN1-204ENST00000394164 GPR107Q5VW38 600 aa10.11□□□□□ -0.79
PSEN1-204ENST00000394164 THOC7Q6I9Y2 204 aaKnown RBP10.11□□□□□ -0.79
PSEN1-204ENST00000394164 GPRIN1Q7Z2K8 1008 aa10.11□□□□□ -0.79
PSEN1-204ENST00000394164 PID1Q7Z2X4 250 aa10.11□□□□□ -0.79
PSEN1-204ENST00000394164 CDKL3Q8IVW4 592 aaPredicted RBP10.11□□□□□ -0.79
PSEN1-204ENST00000394164 USP33Q8TEY7 942 aa10.11□□□□□ -0.79
PSEN1-204ENST00000394164 P2RY11Q96G91 374 aa10.11□□□□□ -0.79
PSEN1-204ENST00000394164 VPS50Q96JG6 964 aa10.11□□□□□ -0.79
PSEN1-204ENST00000394164 LENG8Q96PV6 779 aaPredicted RBP10.11□□□□□ -0.79
PSEN1-204ENST00000394164 FRMD8P1Q9BZ68 369 aaPredicted RBP10.11□□□□□ -0.79
PSEN1-204ENST00000394164 NDEL1Q9GZM8 345 aa10.11□□□□□ -0.79
PSEN1-204ENST00000394164 NAA50Q9GZZ1 169 aaKnown RBP10.11□□□□□ -0.79
PSEN1-204ENST00000394164 COQ10BQ9H8M1 238 aa10.11□□□□□ -0.79
PSEN1-204ENST00000394164 PIGVQ9NUD9 493 aa10.11□□□□□ -0.79
PSEN1-204ENST00000394164 TMEM30AQ9NV96 361 aa10.11□□□□□ -0.79
PSEN1-204ENST00000394164 ZNF358Q9NW07 568 aa10.11□□□□□ -0.79
PSEN1-204ENST00000394164 ARHGAP26Q9UNA1 814 aa10.11□□□□□ -0.79
PSEN1-204ENST00000394164 MYBPHLA2RUH7 354 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms