RNA–Protein interactions for RNA: ENST00000393585.6

CASP3-202, Transcript of caspase 3, humanhuman

TSL 1 (best) BASIC

Gene CASP3, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-202ENST00000393585 VAPBO95292 243 aa11.13□□□□□ -0.63
CASP3-202ENST00000393585 TROVE2P10155 538 aaKnown RBP eCLIP11.13□□□□□ -0.63
CASP3-202ENST00000393585 BST1Q10588 318 aa11.13□□□□□ -0.63
CASP3-202ENST00000393585 SERINC3Q13530 473 aa11.13□□□□□ -0.63
CASP3-202ENST00000393585 C1orf53Q5VUE5 145 aa11.13□□□□□ -0.63
CASP3-202ENST00000393585 ZNF449Q6P9G9 518 aa11.13□□□□□ -0.63
CASP3-202ENST00000393585 KDELC1Q6UW63 502 aa11.13□□□□□ -0.63
CASP3-202ENST00000393585 FAM43BQ6ZT52 329 aaPredicted RBP11.13□□□□□ -0.63
CASP3-202ENST00000393585 ACMSDQ8TDX5 336 aa11.13□□□□□ -0.63
CASP3-202ENST00000393585 WBP2Q969T9 261 aa11.13□□□□□ -0.63
CASP3-202ENST00000393585 E2F7Q96AV8 911 aa11.13□□□□□ -0.63
CASP3-202ENST00000393585 ERP27Q96DN0 273 aa11.13□□□□□ -0.63
CASP3-202ENST00000393585 RNF38Q9H0F5 515 aa11.13□□□□□ -0.63
CASP3-202ENST00000393585 MYLK2Q9H1R3 596 aa11.13□□□□□ -0.63
CASP3-202ENST00000393585 RC3H2Q9HBD1 1191 aaKnown RBP11.13□□□□□ -0.63
CASP3-202ENST00000393585 HAUS2Q9NVX0 235 aa11.13□□□□□ -0.63
CASP3-202ENST00000393585 DONSONQ9NYP3 566 aa11.13□□□□□ -0.63
CASP3-202ENST00000393585 ZFP37Q9Y6Q3 630 aaPredicted RBP11.13□□□□□ -0.63
CASP3-202ENST00000393585 GLRA3O75311 464 aa11.13□□□□□ -0.63
CASP3-202ENST00000393585 KLKB1P03952 638 aa11.13□□□□□ -0.63
CASP3-202ENST00000393585 BPGMP07738 259 aa11.13□□□□□ -0.63
CASP3-202ENST00000393585 MMP2P08253 660 aa11.13□□□□□ -0.63
CASP3-202ENST00000393585 ALDH1A3P47895 512 aa11.13□□□□□ -0.63
CASP3-202ENST00000393585 HARS2P49590 506 aaKnown RBP11.13□□□□□ -0.63
CASP3-202ENST00000393585 SGSHP51688 502 aa11.13□□□□□ -0.63
CASP3-202ENST00000393585 KPNA1P52294 538 aaPredicted RBP11.13□□□□□ -0.63
CASP3-202ENST00000393585 CNGA3Q16281 694 aa11.13□□□□□ -0.63
CASP3-202ENST00000393585 GALNTL6Q49A17 601 aa11.13□□□□□ -0.63
CASP3-202ENST00000393585 PDPK2PQ6A1A2 396 aa11.13□□□□□ -0.63
CASP3-202ENST00000393585 DENND6AQ8IWF6 608 aa11.13□□□□□ -0.63
CASP3-202ENST00000393585 PDZD8Q8NEN9 1154 aa11.13□□□□□ -0.63
CASP3-202ENST00000393585 PPHLN1Q8NEY8 458 aaKnown RBP11.13□□□□□ -0.63
CASP3-202ENST00000393585 OR7D4Q8NG98 312 aa11.13□□□□□ -0.63
CASP3-202ENST00000393585 IMP4Q96G21 291 aaKnown RBP11.13□□□□□ -0.63
CASP3-202ENST00000393585 VPS39Q96JC1 886 aa11.13□□□□□ -0.63
CASP3-202ENST00000393585 ZNF333Q96JL9 665 aa11.13□□□□□ -0.63
CASP3-202ENST00000393585 TRPM5Q9NZQ8 1165 aa11.13□□□□□ -0.63
CASP3-202ENST00000393585 TMEM216Q9P0N5 145 aa11.13□□□□□ -0.63
CASP3-202ENST00000393585 SIRPGQ9P1W8 387 aa11.13□□□□□ -0.63
CASP3-202ENST00000393585 TCAF1Q9Y4C2 921 aa11.13□□□□□ -0.63
CASP3-202ENST00000393585 TRIM43BA6NCK2 446 aa11.12□□□□□ -0.63
CASP3-202ENST00000393585 C2orf71A6NGG8 1288 aa11.12□□□□□ -0.63
CASP3-202ENST00000393585 MUSKO15146 869 aa11.12□□□□□ -0.63
CASP3-202ENST00000393585 GSRP00390 522 aa11.12□□□□□ -0.63
CASP3-202ENST00000393585 SPATA31D3P0C874 917 aa11.12□□□□□ -0.63
CASP3-202ENST00000393585 SAT1P21673 171 aa11.12□□□□□ -0.63
CASP3-202ENST00000393585 ARNTP27540 789 aa11.12□□□□□ -0.63
CASP3-202ENST00000393585 CA8P35219 290 aa11.12□□□□□ -0.63
CASP3-202ENST00000393585 WDR5P61964 334 aaKnown RBP11.12□□□□□ -0.63
CASP3-202ENST00000393585 IRF9Q00978 393 aa11.12□□□□□ -0.63
CASP3-202ENST00000393585 TWF1Q12792 350 aa11.12□□□□□ -0.63
CASP3-202ENST00000393585 CTBP1Q13363 440 aa11.12□□□□□ -0.63
CASP3-202ENST00000393585 FRG1Q14331 258 aaKnown RBP11.12□□□□□ -0.63
CASP3-202ENST00000393585 POTEHQ6S545 545 aa11.12□□□□□ -0.63
CASP3-202ENST00000393585 SPATA31D4Q6ZUB0 917 aa11.12□□□□□ -0.63
CASP3-202ENST00000393585 NLRP9Q7RTR0 991 aa11.12□□□□□ -0.63
CASP3-202ENST00000393585 PLD6Q8N2A8 252 aaKnown RBP11.12□□□□□ -0.63
CASP3-202ENST00000393585 NSMCE1Q8WV22 266 aa11.12□□□□□ -0.63
CASP3-202ENST00000393585 TRIM43Q96BQ3 446 aaPredicted RBP11.12□□□□□ -0.63
CASP3-202ENST00000393585 PRICKLE1Q96MT3 831 aaPredicted RBP11.12□□□□□ -0.63
CASP3-202ENST00000393585 TRIM55Q9BYV6 548 aa11.12□□□□□ -0.63
CASP3-202ENST00000393585 C20orf27Q9GZN8 174 aa11.12□□□□□ -0.63
CASP3-202ENST00000393585 SMPD4Q9NXE4 827 aa11.12□□□□□ -0.63
CASP3-202ENST00000393585 UXTQ9UBK9 157 aaPredicted RBP11.12□□□□□ -0.63
CASP3-202ENST00000393585 NUMBLQ9Y6R0 609 aa11.12□□□□□ -0.63
CASP3-202ENST00000393585 ABHD14A-ACY1A0A1B0GW23 586 aa11.12□□□□□ -0.63
CASP3-202ENST00000393585 PRRG1O14668 218 aa11.12□□□□□ -0.63
CASP3-202ENST00000393585 TSPAN3O60637 253 aa11.12□□□□□ -0.63
CASP3-202ENST00000393585 PLIN3O60664 434 aa11.12□□□□□ -0.63
CASP3-202ENST00000393585 STC2O76061 302 aa11.12□□□□□ -0.63
CASP3-202ENST00000393585 PRKCGP05129 697 aa11.12□□□□□ -0.63
CASP3-202ENST00000393585 URODP06132 367 aa11.12□□□□□ -0.63
CASP3-202ENST00000393585 GABRB3P28472 473 aa11.12□□□□□ -0.63
CASP3-202ENST00000393585 CORO1AP31146 461 aaKnown RBP11.12□□□□□ -0.63
CASP3-202ENST00000393585 MAPKAPK2P49137 400 aa11.12□□□□□ -0.63
CASP3-202ENST00000393585 SERPINB8P50452 374 aa11.12□□□□□ -0.63
CASP3-202ENST00000393585 NCALDP61601 193 aa11.12□□□□□ -0.63
CASP3-202ENST00000393585 MPP1Q00013 466 aa11.12□□□□□ -0.63
CASP3-202ENST00000393585 IL10RBQ08334 325 aa11.12□□□□□ -0.63
CASP3-202ENST00000393585 BNIP1Q12981 228 aa11.12□□□□□ -0.63
CASP3-202ENST00000393585 LBRQ14739 615 aaKnown RBP11.12□□□□□ -0.63
CASP3-202ENST00000393585 GRM3Q14832 879 aa11.12□□□□□ -0.63
CASP3-202ENST00000393585 PARP15Q460N3 678 aa11.12□□□□□ -0.63
CASP3-202ENST00000393585 SNX30Q5VWJ9 437 aa11.12□□□□□ -0.63
CASP3-202ENST00000393585 OTOP2Q7RTS6 562 aa11.12□□□□□ -0.63
CASP3-202ENST00000393585 TTC16Q8NEE8 873 aa11.12□□□□□ -0.63
CASP3-202ENST00000393585 CDK5RAP1Q96SZ6 601 aaKnown RBP11.12□□□□□ -0.63
CASP3-202ENST00000393585 ECT2Q9H8V3 914 aa11.12□□□□□ -0.63
CASP3-202ENST00000393585 MARCOQ9UEW3 520 aaPredicted RBP11.12□□□□□ -0.63
CASP3-202ENST00000393585 LTBP2Q14767 1821 aa11.12□□□□□ -0.63
CASP3-202ENST00000393585 KLF11O14901 512 aa11.11□□□□□ -0.63
CASP3-202ENST00000393585 CSPG5O95196 566 aa11.11□□□□□ -0.63
CASP3-202ENST00000393585 AHSGP02765 367 aa11.11□□□□□ -0.63
CASP3-202ENST00000393585 GSTA1P08263 222 aa11.11□□□□□ -0.63
CASP3-202ENST00000393585 GLDCP23378 1020 aa11.11□□□□□ -0.63
CASP3-202ENST00000393585 ARCN1P48444 511 aaKnown RBP11.11□□□□□ -0.63
CASP3-202ENST00000393585 SLC11A2P49281 568 aa11.11□□□□□ -0.63
CASP3-202ENST00000393585 YBEYP58557 167 aaPredicted RBP11.11□□□□□ -0.63
CASP3-202ENST00000393585 SETDB1Q15047 1291 aa11.11□□□□□ -0.63
CASP3-202ENST00000393585 FASTKD1Q53R41 847 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms