RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 PGBD5Q8N414 524 aa8.77□□□□□ -1
TDP1-203ENST00000393454 LEMD2Q8NC56 503 aa8.77□□□□□ -1
TDP1-203ENST00000393454 DCAKDQ8WVC6 231 aa8.77□□□□□ -1
TDP1-203ENST00000393454 ING5Q8WYH8 240 aa8.77□□□□□ -1
TDP1-203ENST00000393454 ZNF669Q96BR6 464 aaPredicted RBP8.77□□□□□ -1
TDP1-203ENST00000393454 IMP4Q96G21 291 aaKnown RBP8.77□□□□□ -1
TDP1-203ENST00000393454 MRGPRX2Q96LB1 330 aa8.77□□□□□ -1
TDP1-203ENST00000393454 ZNF599Q96NL3 588 aa8.77□□□□□ -1
TDP1-203ENST00000393454 SEMA3CQ99985 751 aa8.77□□□□□ -1
TDP1-203ENST00000393454 CINPQ9BW66 212 aaPredicted RBP8.77□□□□□ -1
TDP1-203ENST00000393454 PRKD2Q9BZL6 878 aa8.77□□□□□ -1
TDP1-203ENST00000393454 POLR1EQ9GZS1 481 aaKnown RBP8.77□□□□□ -1
TDP1-203ENST00000393454 IL22Q9GZX6 179 aa8.77□□□□□ -1
TDP1-203ENST00000393454 TRABDQ9H4I3 376 aa8.77□□□□□ -1
TDP1-203ENST00000393454 PDFQ9HBH1 243 aa8.77□□□□□ -1
TDP1-203ENST00000393454 PLAC1Q9HBJ0 212 aa8.77□□□□□ -1
TDP1-203ENST00000393454 HAUS2Q9NVX0 235 aa8.77□□□□□ -1
TDP1-203ENST00000393454 ZDHHC7Q9NXF8 308 aa8.77□□□□□ -1
TDP1-203ENST00000393454 PSD3Q9NYI0 1048 aa8.77□□□□□ -1
TDP1-203ENST00000393454 EURLQ9NYK6 297 aa8.77□□□□□ -1
TDP1-203ENST00000393454 PLK2Q9NYY3 685 aa8.77□□□□□ -1
TDP1-203ENST00000393454 VPS28Q9UK41 221 aa8.77□□□□□ -1
TDP1-203ENST00000393454 ARHGAP26Q9UNA1 814 aa8.77□□□□□ -1
TDP1-203ENST00000393454 CCL26Q9Y258 94 aa8.77□□□□□ -1
TDP1-203ENST00000393454 MIA3Q5JRA6 1907 aa8.77□□□□□ -1.01
TDP1-203ENST00000393454 IQANK1A0A1B0GTG1 560 aa8.77□□□□□ -1.01
TDP1-203ENST00000393454 MAGEB16A2A368 324 aa8.77□□□□□ -1.01
TDP1-203ENST00000393454 CCDC78A2IDD5 438 aa8.77□□□□□ -1.01
TDP1-203ENST00000393454 A6NNZ2 444 aa8.77□□□□□ -1.01
TDP1-203ENST00000393454 CXorf49A8MYA2 514 aaPredicted RBP8.77□□□□□ -1.01
TDP1-203ENST00000393454 MOSPD3O75425 235 aa8.77□□□□□ -1.01
TDP1-203ENST00000393454 FAM155BO75949 473 aa8.77□□□□□ -1.01
TDP1-203ENST00000393454 CYBBP04839 570 aa8.77□□□□□ -1.01
TDP1-203ENST00000393454 BRAFP15056 766 aa8.77□□□□□ -1.01
TDP1-203ENST00000393454 CREB1P16220 341 aa8.77□□□□□ -1.01
TDP1-203ENST00000393454 PRKCHP24723 683 aa8.77□□□□□ -1.01
TDP1-203ENST00000393454 MZF1P28698 734 aaPredicted RBP8.77□□□□□ -1.01
TDP1-203ENST00000393454 GBP2P32456 591 aaPredicted RBP8.77□□□□□ -1.01
TDP1-203ENST00000393454 NRIP1P48552 1158 aa8.77□□□□□ -1.01
TDP1-203ENST00000393454 TUBB8Q3ZCM7 444 aa8.77□□□□□ -1.01
TDP1-203ENST00000393454 MPPE1Q53F39 396 aa8.77□□□□□ -1.01
TDP1-203ENST00000393454 SPANXN3Q5MJ09 141 aa8.77□□□□□ -1.01
TDP1-203ENST00000393454 STEAP4Q687X5 459 aa8.77□□□□□ -1.01
TDP1-203ENST00000393454 SLC26A11Q86WA9 606 aa8.77□□□□□ -1.01
TDP1-203ENST00000393454 UNC5BQ8IZJ1 945 aa8.77□□□□□ -1.01
TDP1-203ENST00000393454 C12orf76Q8N812 135 aaPredicted RBP8.77□□□□□ -1.01
TDP1-203ENST00000393454 MGARPQ8TDB4 240 aa8.77□□□□□ -1.01
TDP1-203ENST00000393454 GDPD5Q8WTR4 605 aa8.77□□□□□ -1.01
TDP1-203ENST00000393454 SLC44A1Q8WWI5 657 aa8.77□□□□□ -1.01
TDP1-203ENST00000393454 CDKL2Q92772 493 aa8.77□□□□□ -1.01
TDP1-203ENST00000393454 DHRS4Q9BTZ2 278 aa8.77□□□□□ -1.01
TDP1-203ENST00000393454 SLC28A3Q9HAS3 691 aa8.77□□□□□ -1.01
TDP1-203ENST00000393454 CHRAC1Q9NRG0 131 aa8.77□□□□□ -1.01
TDP1-203ENST00000393454 SMYD2Q9NRG4 433 aa8.77□□□□□ -1.01
TDP1-203ENST00000393454 SEPT3Q9UH03 358 aa8.77□□□□□ -1.01
TDP1-203ENST00000393454 MRPS23Q9Y3D9 190 aaKnown RBP8.77□□□□□ -1.01
TDP1-203ENST00000393454 CHD5Q8TDI0 1954 aa8.77□□□□□ -1.01
TDP1-203ENST00000393454 CHD9Q3L8U1 2897 aa8.77□□□□□ -1.01
TDP1-203ENST00000393454 HELZP42694 1942 aaKnown RBP8.76□□□□□ -1.01
TDP1-203ENST00000393454 A0A1W2PPM1 405 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 FAM159BA6NKW6 160 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 ZNF197O14709 1029 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 SNAP91O60641 907 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 UGT1A9O60656 530 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 SPAG7O75391 227 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 GJB3O75712 270 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 MT-ND3P03897 115 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 CHN1P15882 459 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 ADRA1AP35348 466 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 CSKP41240 450 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 SEPT6Q14141 434 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 POU6F1Q14863 301 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 RASA2Q15283 850 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 RAB30Q15771 203 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 KDELC1Q6UW63 502 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 TMC5Q6UXY8 1006 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 LINGO4Q6UY18 593 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 ZNF783Q6ZMS7 281 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 TRABD2AQ86V40 505 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 RASSF3Q86WH2 238 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 KLHDC8BQ8IXV7 354 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 C4orf33Q8N1A6 199 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 CPXM2Q8N436 756 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 ANKRD42Q8N9B4 389 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 PPHLN1Q8NEY8 458 aaKnown RBP8.76□□□□□ -1.01
TDP1-203ENST00000393454 SMG7Q92540 1137 aaKnown RBP8.76□□□□□ -1.01
TDP1-203ENST00000393454 USP13Q92995 863 aaPredicted RBP8.76□□□□□ -1.01
TDP1-203ENST00000393454 IFT43Q96FT9 208 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 FCRL3Q96P31 734 aaPredicted RBP8.76□□□□□ -1.01
TDP1-203ENST00000393454 SMC6Q96SB8 1091 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 FEM1AQ9BSK4 669 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 ACE2Q9BYF1 805 aaPredicted RBP8.76□□□□□ -1.01
TDP1-203ENST00000393454 IGFLR1Q9H665 355 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 UGT1A7Q9HAW7 530 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 UGT1A10Q9HAW8 530 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 UGT1A8Q9HAW9 530 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 VPS45Q9NRW7 570 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 TDP1Q9NUW8 608 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 MOCS1Q9NZB8 636 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 IL1RAPL1Q9NZN1 696 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms