RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 HPCAL4Q9UM19 191 aa7.81□□□□□ -1.16
HMGB3P1-201ENST00000393368 WASF2Q9Y6W5 498 aa7.81□□□□□ -1.16
HMGB3P1-201ENST00000393368 MYO18AQ92614 2054 aaKnown RBP7.81□□□□□ -1.16
HMGB3P1-201ENST00000393368 RIF1Q5UIP0 2472 aaKnown RBP7.81□□□□□ -1.16
HMGB3P1-201ENST00000393368 NYNRINQ9P2P1 1898 aaKnown RBP7.81□□□□□ -1.16
HMGB3P1-201ENST00000393368 ABCA7Q8IZY2 2146 aa7.81□□□□□ -1.16
HMGB3P1-201ENST00000393368 TNRC6BQ9UPQ9 1833 aaKnown RBP7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 PLXND1Q9Y4D7 1925 aa7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 TBC1D3DA0A087WVF3 549 aa7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 TBC1D3IA0A087WXS9 549 aa7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 TBC1D3EA0A087X179 549 aa7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 TBC1D3KA0A087X1G2 549 aa7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 A0A1B0GVT2 93 aa7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 TTC24A2A3L6 582 aaPredicted RBP7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 TBC1D3FA6NER0 549 aaPredicted RBP7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 PRR5-ARHGAP8B1AHC4 643 aa7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 TBC1D3LB9A6J9 549 aa7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 KRIT1O00522 736 aa7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 CDX4O14627 284 aaPredicted RBP7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 INSIG1O15503 277 aa7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 MAP3K6O95382 1288 aa7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 TBC1D3HP0C7X1 549 aa7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 TNNT1P13805 278 aa7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 IL4RP24394 825 aa7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 MAGEA1P43355 309 aa7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 RECQLP46063 649 aaPredicted RBP7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 RGRP47804 291 aa7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 CSNK1EP49674 416 aaKnown RBP7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 CDH6P55285 790 aa7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 TAS2R38P59533 333 aa7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 ARHGAP8P85298 464 aa7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 BNC1Q01954 994 aa7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 GRIK2Q13002 908 aa7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 ACAP1Q15027 740 aa7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 CYTH1Q15438 398 aa7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 DUOXA1Q1HG43 343 aa7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 UAP1L1Q3KQV9 507 aa7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 BOLA3Q53S33 107 aa7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 FAM182AQ5T1J6 154 aa7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 LCE2DQ5TA82 110 aaPredicted RBP7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 FAM46CQ5VWP2 391 aa7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 AFMIDQ63HM1 303 aa7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 TBC1D3GQ6DHY5 549 aa7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 TBC1D3CQ6IPX1 549 aa7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 SLC23A3Q6PIS1 610 aa7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 PARS2Q7L3T8 475 aaKnown RBP7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 DSG4Q86SJ6 1040 aa7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 PSTKQ8IV42 348 aaKnown RBP7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 TBC1D3Q8IZP1 549 aaPredicted RBP7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 PCDH20Q8N6Y1 951 aaKnown RBP7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 OR2AP1Q8NGE2 309 aa7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 OR2T34Q8NGX1 318 aa7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 C1orf216Q8TAB5 229 aa7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 NETO1Q8TDF5 533 aa7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 DNASE2BQ8WZ79 361 aa7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 TSC1Q92574 1164 aa7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 KLK6Q92876 244 aa7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 CCDC114Q96M63 670 aa7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 MYOCQ99972 504 aa7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 HEPHQ9BQS7 1158 aa7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 NUSAP1Q9BXS6 441 aaKnown RBP7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 CEP44Q9C0F1 390 aa7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 IL21RQ9HBE5 538 aa7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 PDFQ9HBH1 243 aa7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 CAPN10Q9HC96 672 aa7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 TM9SF3Q9HD45 589 aa7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 DLL3Q9NYJ7 618 aa7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 LHX3Q9UBR4 397 aa7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 UBA2Q9UBT2 640 aaPredicted RBP7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 EVLQ9UI08 416 aaPredicted RBP7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 GGT7Q9UJ14 662 aa7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 FZD4Q9ULV1 537 aa7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 SCML1Q9UN30 329 aa7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 SLC6A14Q9UN76 642 aa7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 ITM2BQ9Y287 266 aa7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 CA5BQ9Y2D0 317 aa7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 THADAQ6YHU6 1953 aa7.8□□□□□ -1.16
HMGB3P1-201ENST00000393368 FAM186AA6NE01 2351 aa7.79□□□□□ -1.16
HMGB3P1-201ENST00000393368 A0A1B0GTW7 788 aa7.79□□□□□ -1.16
HMGB3P1-201ENST00000393368 RCCD1A6NED2 376 aa7.79□□□□□ -1.16
HMGB3P1-201ENST00000393368 ARHGAP42A6NI28 874 aa7.79□□□□□ -1.16
HMGB3P1-201ENST00000393368 LRRC72A6NJI9 287 aa7.79□□□□□ -1.16
HMGB3P1-201ENST00000393368 KCNK3O14649 394 aa7.79□□□□□ -1.16
HMGB3P1-201ENST00000393368 SLC30A4O14863 429 aa7.79□□□□□ -1.16
HMGB3P1-201ENST00000393368 MUSKO15146 869 aa7.79□□□□□ -1.16
HMGB3P1-201ENST00000393368 ALOX15BO15296 676 aa7.79□□□□□ -1.16
HMGB3P1-201ENST00000393368 BCAT2O15382 392 aaPredicted RBP7.79□□□□□ -1.16
HMGB3P1-201ENST00000393368 PLRG1O43660 514 aaKnown RBP7.79□□□□□ -1.16
HMGB3P1-201ENST00000393368 MFSD11O43934 449 aa7.79□□□□□ -1.16
HMGB3P1-201ENST00000393368 PRAMEF11O60813 436 aa7.79□□□□□ -1.16
HMGB3P1-201ENST00000393368 PIGNO95427 931 aa7.79□□□□□ -1.16
HMGB3P1-201ENST00000393368 GSRP00390 522 aa7.79□□□□□ -1.16
HMGB3P1-201ENST00000393368 PRNPP04156 253 aa7.79□□□□□ -1.16
HMGB3P1-201ENST00000393368 UGT2B4P06133 528 aa7.79□□□□□ -1.16
HMGB3P1-201ENST00000393368 SERPINF2P08697 491 aa7.79□□□□□ -1.16
HMGB3P1-201ENST00000393368 GNSP15586 552 aa7.79□□□□□ -1.16
HMGB3P1-201ENST00000393368 PRLRP16471 622 aa7.79□□□□□ -1.16
HMGB3P1-201ENST00000393368 ITIH2P19823 946 aa7.79□□□□□ -1.16
HMGB3P1-201ENST00000393368 CD27P26842 260 aa7.79□□□□□ -1.16
HMGB3P1-201ENST00000393368 HTR7P34969 479 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms