RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 LRPAP1P30533 357 aa16.58■□□□□ 0.25
PHTF1-205ENST00000393357 GRM5P41594 1212 aa16.58■□□□□ 0.25
PHTF1-205ENST00000393357 PRKCQQ04759 706 aa16.58■□□□□ 0.25
PHTF1-205ENST00000393357 NIPAL4Q0D2K0 466 aa16.58■□□□□ 0.25
PHTF1-205ENST00000393357 TRIM25Q14258 630 aaKnown RBP16.58■□□□□ 0.25
PHTF1-205ENST00000393357 PGS1Q32NB8 556 aa16.58■□□□□ 0.25
PHTF1-205ENST00000393357 MFSD4BQ5TF39 518 aa16.58■□□□□ 0.25
PHTF1-205ENST00000393357 HMBOX1Q6NT76 420 aa16.58■□□□□ 0.25
PHTF1-205ENST00000393357 TMEM53Q6P2H8 277 aa16.58■□□□□ 0.25
PHTF1-205ENST00000393357 NIPA1Q7RTP0 329 aa16.58■□□□□ 0.25
PHTF1-205ENST00000393357 LDB1Q86U70 411 aaPredicted RBP16.58■□□□□ 0.25
PHTF1-205ENST00000393357 TTC30AQ86WT1 665 aa16.58■□□□□ 0.25
PHTF1-205ENST00000393357 SLC15A4Q8N697 577 aa16.58■□□□□ 0.25
PHTF1-205ENST00000393357 FNIP1Q8TF40 1166 aa16.58■□□□□ 0.25
PHTF1-205ENST00000393357 COX4I2Q96KJ9 171 aa16.58■□□□□ 0.25
PHTF1-205ENST00000393357 SPATA13Q96N96 652 aa16.58■□□□□ 0.25
PHTF1-205ENST00000393357 PPP1R10Q96QC0 940 aaKnown RBP16.58■□□□□ 0.25
PHTF1-205ENST00000393357 MRPL45Q9BRJ2 306 aaKnown RBP16.58■□□□□ 0.25
PHTF1-205ENST00000393357 DHX33Q9H6R0 707 aaKnown RBP16.58■□□□□ 0.25
PHTF1-205ENST00000393357 TSR3Q9UJK0 312 aaKnown RBP16.58■□□□□ 0.25
PHTF1-205ENST00000393357 PRPF19Q9UMS4 504 aaKnown RBP16.58■□□□□ 0.25
PHTF1-205ENST00000393357 OAZ3Q9UMX2 235 aa16.58■□□□□ 0.25
PHTF1-205ENST00000393357 DOCK5Q9H7D0 1870 aa16.58■□□□□ 0.25
PHTF1-205ENST00000393357 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.58■□□□□ 0.24
PHTF1-205ENST00000393357 TRIM38O00635 465 aa16.58■□□□□ 0.24
PHTF1-205ENST00000393357 MRASO14807 208 aa16.58■□□□□ 0.24
PHTF1-205ENST00000393357 LSM1O15116 133 aaKnown RBP16.58■□□□□ 0.24
PHTF1-205ENST00000393357 STAG3L1P0CL83 205 aa16.58■□□□□ 0.24
PHTF1-205ENST00000393357 RCVRNP35243 200 aa16.58■□□□□ 0.24
PHTF1-205ENST00000393357 CLCN2P51788 898 aa16.58■□□□□ 0.24
PHTF1-205ENST00000393357 FPGSQ05932 587 aa16.58■□□□□ 0.24
PHTF1-205ENST00000393357 DNASE1L3Q13609 305 aa16.58■□□□□ 0.24
PHTF1-205ENST00000393357 GJC2Q5T442 439 aaPredicted RBP16.58■□□□□ 0.24
PHTF1-205ENST00000393357 EXOC8Q8IYI6 725 aa16.58■□□□□ 0.24
PHTF1-205ENST00000393357 TMCO5AQ8N6Q1 288 aa16.58■□□□□ 0.24
PHTF1-205ENST00000393357 DNAJB14Q8TBM8 379 aa16.58■□□□□ 0.24
PHTF1-205ENST00000393357 TNFRSF12AQ9NP84 129 aa16.58■□□□□ 0.24
PHTF1-205ENST00000393357 EXD2Q9NVH0 621 aa16.58■□□□□ 0.24
PHTF1-205ENST00000393357 WDR70Q9NW82 654 aa16.58■□□□□ 0.24
PHTF1-205ENST00000393357 TMA7Q9Y2S6 64 aaKnown RBP16.58■□□□□ 0.24
PHTF1-205ENST00000393357 MTF2Q9Y483 593 aaPredicted RBP16.58■□□□□ 0.24
PHTF1-205ENST00000393357 TMEM247A6NEH6 219 aa16.58■□□□□ 0.24
PHTF1-205ENST00000393357 TADA2AO75478 443 aa16.58■□□□□ 0.24
PHTF1-205ENST00000393357 BMXP51813 675 aa16.58■□□□□ 0.24
PHTF1-205ENST00000393357 NKX2-5P52952 324 aaPredicted RBP16.58■□□□□ 0.24
PHTF1-205ENST00000393357 TPD52P55327 224 aaPredicted RBP16.58■□□□□ 0.24
PHTF1-205ENST00000393357 SPIDRQ14159 915 aa16.58■□□□□ 0.24
PHTF1-205ENST00000393357 TRIM16LQ309B1 348 aa16.58■□□□□ 0.24
PHTF1-205ENST00000393357 KCTD8Q6ZWB6 473 aa16.58■□□□□ 0.24
PHTF1-205ENST00000393357 COPS5Q92905 334 aa16.58■□□□□ 0.24
PHTF1-205ENST00000393357 LRRC39Q96DD0 335 aa16.58■□□□□ 0.24
PHTF1-205ENST00000393357 RANBP9Q96S59 729 aa16.58■□□□□ 0.24
PHTF1-205ENST00000393357 HEPHQ9BQS7 1158 aa16.58■□□□□ 0.24
PHTF1-205ENST00000393357 POMKQ9H5K3 350 aa16.58■□□□□ 0.24
PHTF1-205ENST00000393357 CPSF3Q9UKF6 684 aaKnown RBP16.58■□□□□ 0.24
PHTF1-205ENST00000393357 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.57■□□□□ 0.24
PHTF1-205ENST00000393357 KDM1AO60341 852 aa16.57■□□□□ 0.24
PHTF1-205ENST00000393357 CILPO75339 1184 aa16.57■□□□□ 0.24
PHTF1-205ENST00000393357 VTNP04004 478 aa16.57■□□□□ 0.24
PHTF1-205ENST00000393357 IQCF3P0C7M6 154 aa16.57■□□□□ 0.24
PHTF1-205ENST00000393357 ELK4P28324 431 aa16.57■□□□□ 0.24
PHTF1-205ENST00000393357 ARL2P36404 184 aa16.57■□□□□ 0.24
PHTF1-205ENST00000393357 BCAT1P54687 386 aa16.57■□□□□ 0.24
PHTF1-205ENST00000393357 SULT2A1Q06520 285 aa16.57■□□□□ 0.24
PHTF1-205ENST00000393357 PDK2Q15119 407 aa16.57■□□□□ 0.24
PHTF1-205ENST00000393357 TAZQ16635 292 aa16.57■□□□□ 0.24
PHTF1-205ENST00000393357 PLA2G4EQ3MJ16 856 aa16.57■□□□□ 0.24
PHTF1-205ENST00000393357 NCBP2-AS2Q69YL0 99 aa16.57■□□□□ 0.24
PHTF1-205ENST00000393357 SCIMPQ6UWF3 145 aa16.57■□□□□ 0.24
PHTF1-205ENST00000393357 OLFML1Q6UWY5 402 aa16.57■□□□□ 0.24
PHTF1-205ENST00000393357 DHFR2Q86XF0 187 aa16.57■□□□□ 0.24
PHTF1-205ENST00000393357 SIX6OS1Q8N1H7 587 aa16.57■□□□□ 0.24
PHTF1-205ENST00000393357 HPS1Q92902 700 aa16.57■□□□□ 0.24
PHTF1-205ENST00000393357 ELMO2Q96JJ3 720 aa16.57■□□□□ 0.24
PHTF1-205ENST00000393357 RBBP8Q99708 897 aa16.57■□□□□ 0.24
PHTF1-205ENST00000393357 ZBTB26Q9HCK0 441 aa16.57■□□□□ 0.24
PHTF1-205ENST00000393357 DAPK2Q9UIK4 370 aa16.57■□□□□ 0.24
PHTF1-205ENST00000393357 RAP2CQ9Y3L5 183 aa16.57■□□□□ 0.24
PHTF1-205ENST00000393357 RBM47A0AV96 593 aaKnown RBP16.57■□□□□ 0.24
PHTF1-205ENST00000393357 EI24O14681 340 aa16.57■□□□□ 0.24
PHTF1-205ENST00000393357 ACOT8O14734 319 aa16.57■□□□□ 0.24
PHTF1-205ENST00000393357 DLX3O60479 287 aa16.57■□□□□ 0.24
PHTF1-205ENST00000393357 ACAT1P24752 427 aaKnown RBP16.57■□□□□ 0.24
PHTF1-205ENST00000393357 HMOX2P30519 316 aa16.57■□□□□ 0.24
PHTF1-205ENST00000393357 RAB39AQ14964 217 aa16.57■□□□□ 0.24
PHTF1-205ENST00000393357 VPS26BQ4G0F5 336 aa16.57■□□□□ 0.24
PHTF1-205ENST00000393357 SPATA22Q8NHS9 363 aa16.57■□□□□ 0.24
PHTF1-205ENST00000393357 SLCO4A1Q96BD0 722 aa16.57■□□□□ 0.24
PHTF1-205ENST00000393357 HERC2P3Q9BVR0 1158 aa16.57■□□□□ 0.24
PHTF1-205ENST00000393357 UPF3AQ9H1J1 476 aaKnown RBP16.57■□□□□ 0.24
PHTF1-205ENST00000393357 CDT1Q9H211 546 aa16.57■□□□□ 0.24
PHTF1-205ENST00000393357 NRBP2Q9NSY0 501 aa16.57■□□□□ 0.24
PHTF1-205ENST00000393357 SLC27A5Q9Y2P5 690 aa16.57■□□□□ 0.24
PHTF1-205ENST00000393357 MAGED1Q9Y5V3 778 aaPredicted RBP16.57■□□□□ 0.24
PHTF1-205ENST00000393357 SLC4A1P02730 911 aa16.57■□□□□ 0.24
PHTF1-205ENST00000393357 MYL4P12829 197 aa16.57■□□□□ 0.24
PHTF1-205ENST00000393357 CDH3P22223 829 aa16.57■□□□□ 0.24
PHTF1-205ENST00000393357 HOXD12P35452 270 aa16.57■□□□□ 0.24
PHTF1-205ENST00000393357 SULT1E1P49888 294 aa16.57■□□□□ 0.24
PHTF1-205ENST00000393357 IL1RL1Q01638 556 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms