RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 FAM117BQ6P1L5 589 aa10.69□□□□□ -0.7
CALD1-203ENST00000393118 SIX5Q8N196 739 aa10.69□□□□□ -0.7
CALD1-203ENST00000393118 ACMSDQ8TDX5 336 aa10.69□□□□□ -0.7
CALD1-203ENST00000393118 YIPF2Q9BWQ6 316 aa10.69□□□□□ -0.7
CALD1-203ENST00000393118 ADAMTS10Q9H324 1103 aa10.69□□□□□ -0.7
CALD1-203ENST00000393118 ANKRD33BA6NCL7 494 aa10.68□□□□□ -0.7
CALD1-203ENST00000393118 BIRC5O15392 142 aa10.68□□□□□ -0.7
CALD1-203ENST00000393118 PAGE1O75459 146 aa10.68□□□□□ -0.7
CALD1-203ENST00000393118 USP1O94782 785 aa10.68□□□□□ -0.7
CALD1-203ENST00000393118 MPOP05164 745 aa10.68□□□□□ -0.7
CALD1-203ENST00000393118 MLNP12872 115 aa10.68□□□□□ -0.7
CALD1-203ENST00000393118 MAGEA10P43363 369 aaPredicted RBP10.68□□□□□ -0.7
CALD1-203ENST00000393118 PKNOX1P55347 436 aa10.68□□□□□ -0.7
CALD1-203ENST00000393118 SLC18A2Q05940 514 aa10.68□□□□□ -0.7
CALD1-203ENST00000393118 MTA1Q13330 715 aa10.68□□□□□ -0.7
CALD1-203ENST00000393118 PDAP1Q13442 181 aaKnown RBP10.68□□□□□ -0.7
CALD1-203ENST00000393118 ZNF460Q14592 562 aa10.68□□□□□ -0.7
CALD1-203ENST00000393118 MARCH8Q5T0T0 291 aa10.68□□□□□ -0.7
CALD1-203ENST00000393118 LRRC8EQ6NSJ5 796 aa10.68□□□□□ -0.7
CALD1-203ENST00000393118 PATL1Q86TB9 770 aaKnown RBP10.68□□□□□ -0.7
CALD1-203ENST00000393118 IFNEQ86WN2 208 aa10.68□□□□□ -0.7
CALD1-203ENST00000393118 KIAA2013Q8IYS2 634 aa10.68□□□□□ -0.7
CALD1-203ENST00000393118 ULK2Q8IYT8 1036 aa10.68□□□□□ -0.7
CALD1-203ENST00000393118 KBTBD7Q8WVZ9 684 aa10.68□□□□□ -0.7
CALD1-203ENST00000393118 C7orf26Q96N11 449 aa10.68□□□□□ -0.7
CALD1-203ENST00000393118 RCOR3Q9P2K3 495 aaPredicted RBP10.68□□□□□ -0.7
CALD1-203ENST00000393118 TK2O00142 265 aa10.68□□□□□ -0.7
CALD1-203ENST00000393118 PIRO00625 290 aa10.68□□□□□ -0.7
CALD1-203ENST00000393118 CCL22O00626 93 aa10.68□□□□□ -0.7
CALD1-203ENST00000393118 PFDN6O15212 129 aa10.68□□□□□ -0.7
CALD1-203ENST00000393118 TSPAN3O60637 253 aa10.68□□□□□ -0.7
CALD1-203ENST00000393118 RFPL1O75677 317 aa10.68□□□□□ -0.7
CALD1-203ENST00000393118 AP2A1O95782 977 aa10.68□□□□□ -0.7
CALD1-203ENST00000393118 OAS1P00973 400 aaKnown RBP10.68□□□□□ -0.7
CALD1-203ENST00000393118 APOA4P06727 396 aa10.68□□□□□ -0.7
CALD1-203ENST00000393118 NMBRP28336 390 aa10.68□□□□□ -0.7
CALD1-203ENST00000393118 GRIA4P48058 902 aa10.68□□□□□ -0.7
CALD1-203ENST00000393118 NEK3P51956 506 aa10.68□□□□□ -0.7
CALD1-203ENST00000393118 TPD52P55327 224 aaPredicted RBP10.68□□□□□ -0.7
CALD1-203ENST00000393118 FCGRTP55899 365 aa10.68□□□□□ -0.7
CALD1-203ENST00000393118 TBX4P57082 545 aa10.68□□□□□ -0.7
CALD1-203ENST00000393118 WASHC5Q12768 1159 aa10.68□□□□□ -0.7
CALD1-203ENST00000393118 GRB14Q14449 540 aa10.68□□□□□ -0.7
CALD1-203ENST00000393118 FAM171A1Q5VUB5 890 aa10.68□□□□□ -0.7
CALD1-203ENST00000393118 NEPROQ6NW34 567 aa10.68□□□□□ -0.7
CALD1-203ENST00000393118 TAS2R42Q7RTR8 314 aa10.68□□□□□ -0.7
CALD1-203ENST00000393118 ZBTB46Q86UZ6 589 aa10.68□□□□□ -0.7
CALD1-203ENST00000393118 VAT1Q99536 393 aa10.68□□□□□ -0.7
CALD1-203ENST00000393118 DCUN1D5Q9BTE7 237 aa10.68□□□□□ -0.7
CALD1-203ENST00000393118 MRPL1Q9BYD6 325 aaKnown RBP10.68□□□□□ -0.7
CALD1-203ENST00000393118 XPR1Q9UBH6 696 aa10.68□□□□□ -0.7
CALD1-203ENST00000393118 PEX11AO75192 247 aa10.68□□□□□ -0.7
CALD1-203ENST00000393118 TGDSO95455 350 aa10.68□□□□□ -0.7
CALD1-203ENST00000393118 SERPINA6P08185 405 aa10.68□□□□□ -0.7
CALD1-203ENST00000393118 CALML6Q8TD86 181 aa10.68□□□□□ -0.7
CALD1-203ENST00000393118 NCKIPSDQ9NZQ3 722 aa10.68□□□□□ -0.7
CALD1-203ENST00000393118 DSEQ9UL01 958 aa10.68□□□□□ -0.7
CALD1-203ENST00000393118 FOCADQ5VW36 1801 aa10.68□□□□□ -0.7
CALD1-203ENST00000393118 QSER1Q2KHR3 1735 aa10.68□□□□□ -0.7
CALD1-203ENST00000393118 FAM159BA6NKW6 160 aa10.67□□□□□ -0.7
CALD1-203ENST00000393118 WARSP23381 471 aaKnown RBP10.67□□□□□ -0.7
CALD1-203ENST00000393118 GRM3Q14832 879 aa10.67□□□□□ -0.7
CALD1-203ENST00000393118 TMEM259Q4ZIN3 620 aa10.67□□□□□ -0.7
CALD1-203ENST00000393118 TIGD7Q6NT04 549 aaPredicted RBP10.67□□□□□ -0.7
CALD1-203ENST00000393118 RBM44Q6ZP01 1051 aaKnown RBP10.67□□□□□ -0.7
CALD1-203ENST00000393118 ARRDC4Q8NCT1 418 aa10.67□□□□□ -0.7
CALD1-203ENST00000393118 RAET1EQ8TD07 263 aa10.67□□□□□ -0.7
CALD1-203ENST00000393118 GFM2Q969S9 779 aaKnown RBP10.67□□□□□ -0.7
CALD1-203ENST00000393118 PAAF1Q9BRP4 392 aa10.67□□□□□ -0.7
CALD1-203ENST00000393118 MRPL46Q9H2W6 279 aaKnown RBP10.67□□□□□ -0.7
CALD1-203ENST00000393118 CRTAC1Q9NQ79 661 aa10.67□□□□□ -0.7
CALD1-203ENST00000393118 SLC27A5Q9Y2P5 690 aa10.67□□□□□ -0.7
CALD1-203ENST00000393118 NCF1BA6NI72 391 aaPredicted RBP10.67□□□□□ -0.7
CALD1-203ENST00000393118 ERI2A8K979 691 aaKnown RBP10.67□□□□□ -0.7
CALD1-203ENST00000393118 NCF1CA8MVU1 366 aaPredicted RBP10.67□□□□□ -0.7
CALD1-203ENST00000393118 GPR32O75388 356 aa10.67□□□□□ -0.7
CALD1-203ENST00000393118 THRAP10827 490 aa10.67□□□□□ -0.7
CALD1-203ENST00000393118 NCF1P14598 390 aaPredicted RBP10.67□□□□□ -0.7
CALD1-203ENST00000393118 HNRNPLP14866 589 aaKnown RBP eCLIP10.67□□□□□ -0.71e-8■□□□□ 11.3
CALD1-203ENST00000393118 PRKCHP24723 683 aa10.67□□□□□ -0.7
CALD1-203ENST00000393118 MPSTP25325 297 aa10.67□□□□□ -0.7
CALD1-203ENST00000393118 CD86P42081 329 aa10.67□□□□□ -0.7
CALD1-203ENST00000393118 IRF9Q00978 393 aa10.67□□□□□ -0.7
CALD1-203ENST00000393118 ACSBG2Q5FVE4 666 aa10.67□□□□□ -0.7
CALD1-203ENST00000393118 AGAP9Q5VTM2 703 aa10.67□□□□□ -0.7
CALD1-203ENST00000393118 DENND6AQ8IWF6 608 aa10.67□□□□□ -0.7
CALD1-203ENST00000393118 PPP2R3CQ969Q6 453 aa10.67□□□□□ -0.7
CALD1-203ENST00000393118 COG4Q9H9E3 785 aa10.67□□□□□ -0.7
CALD1-203ENST00000393118 ABCC13Q9NSE7 274 aa10.67□□□□□ -0.7
CALD1-203ENST00000393118 ANGPTL3Q9Y5C1 460 aa10.67□□□□□ -0.7
CALD1-203ENST00000393118 PTCH2Q9Y6C5 1203 aa10.67□□□□□ -0.7
CALD1-203ENST00000393118 GREB1LQ9C091 1923 aaPredicted RBP10.67□□□□□ -0.7
CALD1-203ENST00000393118 PHIPQ8WWQ0 1821 aa10.67□□□□□ -0.7
CALD1-203ENST00000393118 MANSC4A6NHS7 340 aaPredicted RBP10.67□□□□□ -0.7
CALD1-203ENST00000393118 E5RI56 91 aa10.67□□□□□ -0.7
CALD1-203ENST00000393118 ZSCAN9O15535 394 aaPredicted RBP10.67□□□□□ -0.7
CALD1-203ENST00000393118 DLDP09622 509 aaKnown RBP10.67□□□□□ -0.7
CALD1-203ENST00000393118 OR1E1P30953 314 aa10.67□□□□□ -0.7
CALD1-203ENST00000393118 MPP1Q00013 466 aa10.67□□□□□ -0.7
CALD1-203ENST00000393118 PCID2Q5JVF3 399 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms