RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 TUBP50607 506 aa12.48□□□□□ -0.41
RFC5-201ENST00000392542 RPL14P50914 215 aaKnown RBP12.48□□□□□ -0.41
RFC5-201ENST00000392542 RAB27AP51159 221 aa12.48□□□□□ -0.41
RFC5-201ENST00000392542 MPP1Q00013 466 aa12.48□□□□□ -0.41
RFC5-201ENST00000392542 DSG1Q02413 1049 aa12.48□□□□□ -0.41
RFC5-201ENST00000392542 PEX6Q13608 980 aa12.48□□□□□ -0.41
RFC5-201ENST00000392542 POTEHQ6S545 545 aa12.48□□□□□ -0.41
RFC5-201ENST00000392542 CXCL17Q6UXB2 119 aa12.48□□□□□ -0.41
RFC5-201ENST00000392542 IZUMO2Q6UXV1 221 aa12.48□□□□□ -0.41
RFC5-201ENST00000392542 SERINC5Q86VE9 423 aa12.48□□□□□ -0.41
RFC5-201ENST00000392542 CENPLQ8N0S6 344 aaPredicted RBP12.48□□□□□ -0.41
RFC5-201ENST00000392542 TRPV1Q8NER1 839 aa12.48□□□□□ -0.41
RFC5-201ENST00000392542 AGR3Q8TD06 166 aa12.48□□□□□ -0.41
RFC5-201ENST00000392542 PTCD2Q8WV60 388 aaKnown RBP12.48□□□□□ -0.41
RFC5-201ENST00000392542 SOCS4Q8WXH5 440 aa12.48□□□□□ -0.41
RFC5-201ENST00000392542 PPP1R2P1Q96PQ5 205 aa12.48□□□□□ -0.41
RFC5-201ENST00000392542 VCXQ9H320 206 aa12.48□□□□□ -0.41
RFC5-201ENST00000392542 SMOC2Q9H3U7 446 aa12.48□□□□□ -0.41
RFC5-201ENST00000392542 TCAF1Q9Y4C2 921 aa12.48□□□□□ -0.41
RFC5-201ENST00000392542 NYNRINQ9P2P1 1898 aaKnown RBP12.48□□□□□ -0.41
RFC5-201ENST00000392542 BUD23O43709 281 aaKnown RBP12.48□□□□□ -0.41
RFC5-201ENST00000392542 MGEA5O60502 916 aa12.48□□□□□ -0.41
RFC5-201ENST00000392542 ZMPSTE24O75844 475 aa12.48□□□□□ -0.41
RFC5-201ENST00000392542 SORBS2O94875 1100 aaKnown RBP12.48□□□□□ -0.41
RFC5-201ENST00000392542 PIGNO95427 931 aa12.48□□□□□ -0.41
RFC5-201ENST00000392542 CCR1P32246 355 aa12.48□□□□□ -0.41
RFC5-201ENST00000392542 ADRA1AP35348 466 aa12.48□□□□□ -0.41
RFC5-201ENST00000392542 GLRBP48167 497 aa12.48□□□□□ -0.41
RFC5-201ENST00000392542 ARCN1P48444 511 aaKnown RBP12.48□□□□□ -0.41
RFC5-201ENST00000392542 RAB10P61026 200 aa12.48□□□□□ -0.41
RFC5-201ENST00000392542 TBL3Q12788 808 aaKnown RBP12.48□□□□□ -0.41
RFC5-201ENST00000392542 PRKAA1Q13131 559 aa12.48□□□□□ -0.41
RFC5-201ENST00000392542 MAPRE1Q15691 268 aaKnown RBP12.48□□□□□ -0.41
RFC5-201ENST00000392542 GSTA3Q16772 222 aa12.48□□□□□ -0.41
RFC5-201ENST00000392542 ARTNQ5T4W7 220 aa12.48□□□□□ -0.41
RFC5-201ENST00000392542 SEL1L3Q68CR1 1132 aa12.48□□□□□ -0.41
RFC5-201ENST00000392542 LRRC8EQ6NSJ5 796 aa12.48□□□□□ -0.41
RFC5-201ENST00000392542 ESRP1Q6NXG1 681 aaKnown RBP12.48□□□□□ -0.41
RFC5-201ENST00000392542 C17orf99Q6UX52 265 aa12.48□□□□□ -0.41
RFC5-201ENST00000392542 DENND6AQ8IWF6 608 aa12.48□□□□□ -0.41
RFC5-201ENST00000392542 THEM5Q8N1Q8 247 aa12.48□□□□□ -0.41
RFC5-201ENST00000392542 FBXW8Q8N3Y1 598 aa12.48□□□□□ -0.41
RFC5-201ENST00000392542 HASPINQ8TF76 798 aa12.48□□□□□ -0.41
RFC5-201ENST00000392542 STON2Q8WXE9 905 aa12.48□□□□□ -0.41
RFC5-201ENST00000392542 RSPH1Q8WYR4 309 aa12.48□□□□□ -0.41
RFC5-201ENST00000392542 ECSITQ9BQ95 431 aa12.48□□□□□ -0.41
RFC5-201ENST00000392542 ENTPD7Q9NQZ7 604 aa12.48□□□□□ -0.41
RFC5-201ENST00000392542 POMPQ9Y244 141 aa12.48□□□□□ -0.41
RFC5-201ENST00000392542 ACOT9Q9Y305 439 aa12.48□□□□□ -0.41
RFC5-201ENST00000392542 FAM95CA0A1B0GW59 222 aa12.47□□□□□ -0.41
RFC5-201ENST00000392542 TARM1B6A8C7 271 aa12.47□□□□□ -0.41
RFC5-201ENST00000392542 VAPBO95292 243 aa12.47□□□□□ -0.41
RFC5-201ENST00000392542 PGK1P00558 417 aa12.47□□□□□ -0.41
RFC5-201ENST00000392542 HLA-DQB2P05538 268 aa12.47□□□□□ -0.41
RFC5-201ENST00000392542 SP100P23497 879 aaPredicted RBP12.47□□□□□ -0.41
RFC5-201ENST00000392542 PAX3P23760 479 aa12.47□□□□□ -0.41
RFC5-201ENST00000392542 PIK3R1P27986 724 aa12.47□□□□□ -0.41
RFC5-201ENST00000392542 CD52P31358 61 aa12.47□□□□□ -0.41
RFC5-201ENST00000392542 PGGT1BP53609 377 aa12.47□□□□□ -0.41
RFC5-201ENST00000392542 SLC5A3P53794 718 aa12.47□□□□□ -0.41
RFC5-201ENST00000392542 TSPY1Q01534 308 aa12.47□□□□□ -0.41
RFC5-201ENST00000392542 GRIK3Q13003 919 aa12.47□□□□□ -0.41
RFC5-201ENST00000392542 CTBP1Q13363 440 aa12.47□□□□□ -0.41
RFC5-201ENST00000392542 ARL13AQ5H913 290 aaPredicted RBP12.47□□□□□ -0.41
RFC5-201ENST00000392542 OVOS1Q6IE37 1185 aa12.47□□□□□ -0.41
RFC5-201ENST00000392542 TIGD7Q6NT04 549 aaPredicted RBP12.47□□□□□ -0.41
RFC5-201ENST00000392542 TMC7Q7Z402 723 aa12.47□□□□□ -0.41
RFC5-201ENST00000392542 DHDDSQ86SQ9 333 aa12.47□□□□□ -0.41
RFC5-201ENST00000392542 FSTL5Q8N475 847 aaPredicted RBP12.47□□□□□ -0.41
RFC5-201ENST00000392542 PYDC1Q8WXC3 89 aa12.47□□□□□ -0.41
RFC5-201ENST00000392542 CASP10Q92851 521 aa12.47□□□□□ -0.41
RFC5-201ENST00000392542 GATA6Q92908 595 aa12.47□□□□□ -0.41
RFC5-201ENST00000392542 MOCOSQ96EN8 888 aa12.47□□□□□ -0.41
RFC5-201ENST00000392542 CNDP1Q96KN2 507 aa12.47□□□□□ -0.41
RFC5-201ENST00000392542 FCRL2Q96LA5 508 aaPredicted RBP12.47□□□□□ -0.41
RFC5-201ENST00000392542 LENG8Q96PV6 779 aaPredicted RBP12.47□□□□□ -0.41
RFC5-201ENST00000392542 DLGAP2Q9P1A6 1054 aa12.47□□□□□ -0.41
RFC5-201ENST00000392542 SFMBT1Q9UHJ3 866 aa12.47□□□□□ -0.41
RFC5-201ENST00000392542 SCOCQ9UIL1 159 aa12.47□□□□□ -0.41
RFC5-201ENST00000392542 PADI3Q9ULW8 664 aa12.47□□□□□ -0.41
RFC5-201ENST00000392542 SSX2IPQ9Y2D8 614 aa12.47□□□□□ -0.41
RFC5-201ENST00000392542 MYO16Q9Y6X6 1858 aa12.47□□□□□ -0.41
RFC5-201ENST00000392542 GOLGA8QA0A0J9YX86 632 aa12.47□□□□□ -0.41
RFC5-201ENST00000392542 GOLGA8OA6NCC3 632 aa12.47□□□□□ -0.41
RFC5-201ENST00000392542 MAGEA13PA6NCF6 341 aa12.47□□□□□ -0.41
RFC5-201ENST00000392542 GOLGA8NF8WBI6 632 aa12.47□□□□□ -0.41
RFC5-201ENST00000392542 SLCO1B7G3V0H7 640 aa12.47□□□□□ -0.41
RFC5-201ENST00000392542 MSI1O43347 362 aaKnown RBP12.47□□□□□ -0.41
RFC5-201ENST00000392542 GRID2O43424 1007 aa12.47□□□□□ -0.41
RFC5-201ENST00000392542 NEBLO76041 1014 aa12.47□□□□□ -0.41
RFC5-201ENST00000392542 ARNTP27540 789 aa12.47□□□□□ -0.41
RFC5-201ENST00000392542 CCR10P46092 362 aa12.47□□□□□ -0.41
RFC5-201ENST00000392542 NAGLUP54802 743 aa12.47□□□□□ -0.41
RFC5-201ENST00000392542 MTTPP55157 894 aa12.47□□□□□ -0.41
RFC5-201ENST00000392542 CDC16Q13042 620 aa12.47□□□□□ -0.41
RFC5-201ENST00000392542 TUSC3Q13454 348 aa12.47□□□□□ -0.41
RFC5-201ENST00000392542 SLC26A7Q8TE54 656 aa12.47□□□□□ -0.41
RFC5-201ENST00000392542 FTHL17Q9BXU8 183 aa12.47□□□□□ -0.41
RFC5-201ENST00000392542 UBE2OQ9C0C9 1292 aaKnown RBP12.47□□□□□ -0.41
RFC5-201ENST00000392542 WDR55Q9H6Y2 383 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms