RNA–Protein interactions for RNA: ENST00000392334.6

CSNK1D-203, Transcript of casein kinase 1 delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1D, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-203ENST00000392334 UGT1A10Q9HAW8 530 aa20.23■□□□□ 0.83
CSNK1D-203ENST00000392334 UGT1A8Q9HAW9 530 aa20.23■□□□□ 0.83
CSNK1D-203ENST00000392334 DLGAP2Q9P1A6 1054 aa20.23■□□□□ 0.83
CSNK1D-203ENST00000392334 LINC01553A4QN01 128 aa20.22■□□□□ 0.83
CSNK1D-203ENST00000392334 SDR42E2A6NKP2 422 aa20.22■□□□□ 0.83
CSNK1D-203ENST00000392334 IGLV3-25P01717 112 aa20.22■□□□□ 0.83
CSNK1D-203ENST00000392334 URODP06132 367 aa20.22■□□□□ 0.83
CSNK1D-203ENST00000392334 AOC1P19801 751 aa20.22■□□□□ 0.83
CSNK1D-203ENST00000392334 CPA2P48052 419 aa20.22■□□□□ 0.83
CSNK1D-203ENST00000392334 SATB1Q01826 763 aa20.22■□□□□ 0.83
CSNK1D-203ENST00000392334 SMARCB1Q12824 385 aa20.22■□□□□ 0.83
CSNK1D-203ENST00000392334 STEAP4Q687X5 459 aa20.22■□□□□ 0.83
CSNK1D-203ENST00000392334 DDX53Q86TM3 631 aaKnown RBP20.22■□□□□ 0.83
CSNK1D-203ENST00000392334 MIB1Q86YT6 1006 aa20.22■□□□□ 0.83
CSNK1D-203ENST00000392334 PSTKQ8IV42 348 aaKnown RBP20.22■□□□□ 0.83
CSNK1D-203ENST00000392334 ZNF461Q8TAF7 563 aa20.22■□□□□ 0.83
CSNK1D-203ENST00000392334 NR1H4Q96RI1 486 aaPredicted RBP20.22■□□□□ 0.83
CSNK1D-203ENST00000392334 C17orf80Q9BSJ5 609 aa20.22■□□□□ 0.83
CSNK1D-203ENST00000392334 TRIM62Q9BVG3 475 aa20.22■□□□□ 0.83
CSNK1D-203ENST00000392334 UBE2OQ9C0C9 1292 aaKnown RBP20.22■□□□□ 0.83
CSNK1D-203ENST00000392334 SMOC2Q9H3U7 446 aa20.22■□□□□ 0.83
CSNK1D-203ENST00000392334 PCMTD2Q9NV79 361 aa20.22■□□□□ 0.83
CSNK1D-203ENST00000392334 MOCS1Q9NZB8 636 aa20.22■□□□□ 0.83
CSNK1D-203ENST00000392334 DTLQ9NZJ0 730 aa20.22■□□□□ 0.83
CSNK1D-203ENST00000392334 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.22■□□□□ 0.83
CSNK1D-203ENST00000392334 PATJQ8NI35 1801 aa20.22■□□□□ 0.83
CSNK1D-203ENST00000392334 SLC38A8A6NNN8 435 aa20.22■□□□□ 0.83
CSNK1D-203ENST00000392334 PEX19P40855 299 aa20.22■□□□□ 0.83
CSNK1D-203ENST00000392334 RPL10AP62906 217 aaKnown RBP20.22■□□□□ 0.83
CSNK1D-203ENST00000392334 TMCO4Q5TGY1 634 aa20.22■□□□□ 0.83
CSNK1D-203ENST00000392334 RIPOR1Q6ZS17 1223 aa20.22■□□□□ 0.83
CSNK1D-203ENST00000392334 FBXO27Q8NI29 283 aa20.22■□□□□ 0.83
CSNK1D-203ENST00000392334 TRAPPC9Q96Q05 1148 aa20.22■□□□□ 0.83
CSNK1D-203ENST00000392334 OXCT2Q9BYC2 517 aaPredicted RBP20.22■□□□□ 0.83
CSNK1D-203ENST00000392334 WASF2Q9Y6W5 498 aa20.22■□□□□ 0.83
CSNK1D-203ENST00000392334 MYO7AQ13402 2215 aa20.22■□□□□ 0.83
CSNK1D-203ENST00000392334 SZT2Q5T011 3432 aa20.21■□□□□ 0.83
CSNK1D-203ENST00000392334 CLGNO14967 610 aa20.21■□□□□ 0.83
CSNK1D-203ENST00000392334 MFSD11O43934 449 aa20.21■□□□□ 0.83
CSNK1D-203ENST00000392334 RTN3O95197 1032 aaPredicted RBP20.21■□□□□ 0.83
CSNK1D-203ENST00000392334 CA3P07451 260 aa20.21■□□□□ 0.83
CSNK1D-203ENST00000392334 HMBSP08397 361 aa20.21■□□□□ 0.83
CSNK1D-203ENST00000392334 ANPEPP15144 967 aa20.21■□□□□ 0.83
CSNK1D-203ENST00000392334 ZFXP17010 805 aaPredicted RBP20.21■□□□□ 0.83
CSNK1D-203ENST00000392334 PPM1AP35813 382 aa20.21■□□□□ 0.83
CSNK1D-203ENST00000392334 NR2C2P49116 596 aa20.21■□□□□ 0.83
CSNK1D-203ENST00000392334 TPI1P60174 286 aa20.21■□□□□ 0.83
CSNK1D-203ENST00000392334 SCAPQ12770 1279 aa20.21■□□□□ 0.83
CSNK1D-203ENST00000392334 EIF4EBP2Q13542 120 aaPredicted RBP20.21■□□□□ 0.83
CSNK1D-203ENST00000392334 SEMA5AQ13591 1074 aa20.21■□□□□ 0.83
CSNK1D-203ENST00000392334 TRMT10BQ6PF06 316 aaKnown RBP20.21■□□□□ 0.83
CSNK1D-203ENST00000392334 MARK2Q7KZI7 788 aaKnown RBP20.21■□□□□ 0.83
CSNK1D-203ENST00000392334 ADGRG6Q86SQ4 1221 aa20.21■□□□□ 0.83
CSNK1D-203ENST00000392334 C2orf15Q8WU43 125 aaKnown RBP20.21■□□□□ 0.83
CSNK1D-203ENST00000392334 SPATA17Q96L03 361 aa20.21■□□□□ 0.83
CSNK1D-203ENST00000392334 PANX3Q96QZ0 392 aa20.21■□□□□ 0.83
CSNK1D-203ENST00000392334 TSC22D3Q99576 134 aa20.21■□□□□ 0.83
CSNK1D-203ENST00000392334 GDF15Q99988 308 aa20.21■□□□□ 0.83
CSNK1D-203ENST00000392334 C20orf27Q9GZN8 174 aa20.21■□□□□ 0.83
CSNK1D-203ENST00000392334 IL37Q9NZH6 218 aa20.21■□□□□ 0.83
CSNK1D-203ENST00000392334 TRANK1O15050 2925 aa20.21■□□□□ 0.83
CSNK1D-203ENST00000392334 MYO16Q9Y6X6 1858 aa20.21■□□□□ 0.83
CSNK1D-203ENST00000392334 PDE4DIPQ5VU43 2346 aa20.21■□□□□ 0.83
CSNK1D-203ENST00000392334 CCDC195A0A1B0GUA6 201 aa20.2■□□□□ 0.83
CSNK1D-203ENST00000392334 FKBP6O75344 327 aa20.2■□□□□ 0.83
CSNK1D-203ENST00000392334 ALDH1A2O94788 518 aa20.2■□□□□ 0.83
CSNK1D-203ENST00000392334 METTL18O95568 372 aa20.2■□□□□ 0.83
CSNK1D-203ENST00000392334 ERCC2P18074 760 aa20.2■□□□□ 0.83
CSNK1D-203ENST00000392334 CTNNB1P35222 781 aa20.2■□□□□ 0.83
CSNK1D-203ENST00000392334 PBX2P40425 430 aa20.2■□□□□ 0.83
CSNK1D-203ENST00000392334 AP2B1P63010 937 aa20.2■□□□□ 0.83
CSNK1D-203ENST00000392334 C11orf91Q3C1V1 193 aa20.2■□□□□ 0.83
CSNK1D-203ENST00000392334 BEND5Q7L4P6 421 aa20.2■□□□□ 0.83
CSNK1D-203ENST00000392334 KBTBD2Q8IY47 623 aa20.2■□□□□ 0.83
CSNK1D-203ENST00000392334 LGMNQ99538 433 aa20.2■□□□□ 0.83
CSNK1D-203ENST00000392334 HERC2P3Q9BVR0 1158 aa20.2■□□□□ 0.83
CSNK1D-203ENST00000392334 CCSER2Q9H7U1 834 aa20.2■□□□□ 0.83
CSNK1D-203ENST00000392334 ZNF395Q9H8N7 513 aaPredicted RBP20.2■□□□□ 0.83
CSNK1D-203ENST00000392334 TLR8Q9NR97 1041 aaKnown RBP20.2■□□□□ 0.83
CSNK1D-203ENST00000392334 SLC7A8Q9UHI5 535 aa20.2■□□□□ 0.83
CSNK1D-203ENST00000392334 LRIG2O94898 1065 aa20.2■□□□□ 0.82
CSNK1D-203ENST00000392334 GSRP00390 522 aa20.2■□□□□ 0.82
CSNK1D-203ENST00000392334 MLNP12872 115 aa20.2■□□□□ 0.82
CSNK1D-203ENST00000392334 CCR1P32246 355 aa20.2■□□□□ 0.82
CSNK1D-203ENST00000392334 BMPR1AP36894 532 aa20.2■□□□□ 0.82
CSNK1D-203ENST00000392334 AIF1P55008 147 aa20.2■□□□□ 0.82
CSNK1D-203ENST00000392334 SEMA3BQ13214 749 aa20.2■□□□□ 0.82
CSNK1D-203ENST00000392334 TUBB3Q13509 450 aa20.2■□□□□ 0.82
CSNK1D-203ENST00000392334 DPYSQ14117 519 aa20.2■□□□□ 0.82
CSNK1D-203ENST00000392334 C10orf120Q5SQS8 335 aa20.2■□□□□ 0.82
CSNK1D-203ENST00000392334 RWDD4Q6NW29 188 aaKnown RBP20.2■□□□□ 0.82
CSNK1D-203ENST00000392334 AAGABQ6PD74 315 aa20.2■□□□□ 0.82
CSNK1D-203ENST00000392334 DEPDC1BQ8WUY9 529 aa20.2■□□□□ 0.82
CSNK1D-203ENST00000392334 QKIQ96PU8 341 aaKnown RBP eCLIP20.2■□□□□ 0.828e-9■■■■□ 23.9
CSNK1D-203ENST00000392334 MRPL17Q9NRX2 175 aaKnown RBP20.2■□□□□ 0.82
CSNK1D-203ENST00000392334 AFF4Q9UHB7 1163 aaKnown RBP20.2■□□□□ 0.82
CSNK1D-203ENST00000392334 FAM92AA1XBS5 289 aa20.19■□□□□ 0.82
CSNK1D-203ENST00000392334 PRR5-ARHGAP8B1AHC4 643 aa20.19■□□□□ 0.82
CSNK1D-203ENST00000392334 PAGE1O75459 146 aa20.19■□□□□ 0.82
CSNK1D-203ENST00000392334 ABLIM3O94929 683 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms